FFCP PHASE1:Hg19::chr10:75375660..75375663,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:75375660..75375663,-|id=chr10:75375660..75375663,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002032;2.93e-23;1!CL:0000557;2.93e-23;1!CL:0000182;2.65e-08;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-08,12|ontology_enrichment_development_v019=UBERON:0005425;2.93e-23;1!UBERON:0003056;1.17e-08;3!UBERON:0009847;1.17e-08;3!UBERON:0003353;1.17e-08;3|ontology_enrichment_disease=DOID:0050687!1.05e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.09e-16!115;UBERON:0001049!4.10e-16!57;UBERON:0005068!4.10e-16!57;UBERON:0006241!4.10e-16!57;UBERON:0007135!4.10e-16!57;UBERON:0002346!5.43e-16!90;UBERON:0000073!1.93e-15!94;UBERON:0001016!1.93e-15!94;UBERON:0001017!1.06e-14!82;UBERON:0005743!3.32e-14!86;UBERON:0003075!6.87e-14!86;UBERON:0007284!6.87e-14!86;UBERON:0000924!9.38e-13!173;UBERON:0006601!9.38e-13!173;UBERON:0000955!1.66e-12!69;UBERON:0006238!1.66e-12!69;UBERON:0002780!7.37e-12!41;UBERON:0001890!7.37e-12!41;UBERON:0006240!7.37e-12!41;UBERON:0002616!8.27e-12!59;UBERON:0003080!2.41e-11!42;UBERON:0004121!3.55e-11!169;UBERON:0001893!9.40e-11!34;UBERON:0002020!2.55e-10!34;UBERON:0003528!2.55e-10!34;UBERON:0002791!4.32e-10!33;UBERON:0001950!1.11e-09!20;UBERON:0002619!1.23e-09!22;UBERON:0001869!2.09e-09!32;UBERON:0000153!6.12e-09!129;UBERON:0007811!6.12e-09!129;UBERON:0000956!1.12e-08!25;UBERON:0000203!1.12e-08!25;UBERON:0000033!1.25e-08!123;UBERON:0003056!1.54e-07!61|ontology_enrichment_uberon_v019=UBERON:0000941;2.93e-23;1!UBERON:0007195;2.93e-23;1!UBERON:0001785;2.93e-23;1!UBERON:0002464;2.93e-23;1!UBERON:0004904;2.93e-23;1!UBERON:0001021;2.93e-23;1!UBERON:0001905;2.45e-12;2!UBERON:0003714;2.45e-12;2!UBERON:0005162;2.45e-12;2!UBERON:0000122;2.45e-12;2!UBERON:0002757;2.45e-12;2!UBERON:0010134;2.45e-12;2!UBERON:0005408;2.45e-12;2!UBERON:0001899;2.45e-12;2!UBERON:0002371;2.65e-08;12!UBERON:0003296;8.37e-07;4!UBERON:0010133;8.37e-07;4!UBERON:0002784;8.37e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.34e-23,1;UBERON:0001785,1.34e-23,1;UBERON:0002464,1.34e-23,1;UBERON:0004904,1.34e-23,1;UBERON:0001021,1.34e-23,1;UBERON:0003902,1.34e-23,1;UBERON:0005425,1.34e-23,1;UBERON:0007195,4.10e-23,1;UBERON:0003714,1.65e-12,2;UBERON:0005162,1.65e-12,2;UBERON:0000122,1.65e-12,2;UBERON:0001905,3.62e-12,2;UBERON:0002757,3.62e-12,2;UBERON:0010134,3.62e-12,2;UBERON:0005408,3.62e-12,2;UBERON:0001899,3.62e-12,2;UBERON:0001781,6.87e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0.426507697462265,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0.738155454624648,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.170453254832202,0,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0.851692475380653,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0.111443384277478,0,0,0,0,0.994147647766298,0.281338832821026,0.2226174100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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:75375660..75375663,- | |||
|id=chr10:75375660..75375663,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;2.93e-23;1!CL:0000557;2.93e-23;1!CL:0000182;2.65e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.93e-23;1!UBERON:0003056;1.17e-08;3!UBERON:0009847;1.17e-08;3!UBERON:0003353;1.17e-08;3 | |||
|ontology_enrichment_disease=DOID:0050687!1.05e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.09e-16!115;UBERON:0001049!4.10e-16!57;UBERON:0005068!4.10e-16!57;UBERON:0006241!4.10e-16!57;UBERON:0007135!4.10e-16!57;UBERON:0002346!5.43e-16!90;UBERON:0000073!1.93e-15!94;UBERON:0001016!1.93e-15!94;UBERON:0001017!1.06e-14!82;UBERON:0005743!3.32e-14!86;UBERON:0003075!6.87e-14!86;UBERON:0007284!6.87e-14!86;UBERON:0000924!9.38e-13!173;UBERON:0006601!9.38e-13!173;UBERON:0000955!1.66e-12!69;UBERON:0006238!1.66e-12!69;UBERON:0002780!7.37e-12!41;UBERON:0001890!7.37e-12!41;UBERON:0006240!7.37e-12!41;UBERON:0002616!8.27e-12!59;UBERON:0003080!2.41e-11!42;UBERON:0004121!3.55e-11!169;UBERON:0001893!9.40e-11!34;UBERON:0002020!2.55e-10!34;UBERON:0003528!2.55e-10!34;UBERON:0002791!4.32e-10!33;UBERON:0001950!1.11e-09!20;UBERON:0002619!1.23e-09!22;UBERON:0001869!2.09e-09!32;UBERON:0000153!6.12e-09!129;UBERON:0007811!6.12e-09!129;UBERON:0000956!1.12e-08!25;UBERON:0000203!1.12e-08!25;UBERON:0000033!1.25e-08!123;UBERON:0003056!1.54e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.93e-23;1!UBERON:0007195;2.93e-23;1!UBERON:0001785;2.93e-23;1!UBERON:0002464;2.93e-23;1!UBERON:0004904;2.93e-23;1!UBERON:0001021;2.93e-23;1!UBERON:0001905;2.45e-12;2!UBERON:0003714;2.45e-12;2!UBERON:0005162;2.45e-12;2!UBERON:0000122;2.45e-12;2!UBERON:0002757;2.45e-12;2!UBERON:0010134;2.45e-12;2!UBERON:0005408;2.45e-12;2!UBERON:0001899;2.45e-12;2!UBERON:0002371;2.65e-08;12!UBERON:0003296;8.37e-07;4!UBERON:0010133;8.37e-07;4!UBERON:0002784;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.34e-23,1;UBERON:0001785,1.34e-23,1;UBERON:0002464,1.34e-23,1;UBERON:0004904,1.34e-23,1;UBERON:0001021,1.34e-23,1;UBERON:0003902,1.34e-23,1;UBERON:0005425,1.34e-23,1;UBERON:0007195,4.10e-23,1;UBERON:0003714,1.65e-12,2;UBERON:0005162,1.65e-12,2;UBERON:0000122,1.65e-12,2;UBERON:0001905,3.62e-12,2;UBERON:0002757,3.62e-12,2;UBERON:0010134,3.62e-12,2;UBERON:0005408,3.62e-12,2;UBERON:0001899,3.62e-12,2;UBERON:0001781,6.87e-07,4 | |||
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| |||
|short_description=p@chr10:75375660..75375663,- | |||
}} |
Revision as of 14:22, 10 September 2013
Short description: | p@chr10:75375660..75375663, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:75375660..75375663, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.46e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.34e-23 | 1 |
cranial nerve | 1.34e-23 | 1 |
nerve trunk | 1.34e-23 | 1 |
nerve connecting eye with brain | 1.34e-23 | 1 |
nerve | 1.34e-23 | 1 |
retinal neural layer | 1.34e-23 | 1 |
presumptive neural retina | 1.34e-23 | 1 |
stroma of bone marrow | 4.10e-23 | 1 |
neural tissue | 1.65e-12 | 2 |
multi cell component structure | 1.65e-12 | 2 |
neuron projection bundle | 1.65e-12 | 2 |
pineal body | 3.62e-12 | 2 |
regional part of epithalamus | 3.62e-12 | 2 |
secretory circumventricular organ | 3.62e-12 | 2 |
circumventricular organ | 3.62e-12 | 2 |
epithalamus | 3.62e-12 | 2 |
layer of retina | 6.87e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.