FFCP PHASE1:Hg19::chr10:105495838..105495848,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C60|description=CAGE_peak_at_chr10:105495838..105495848,-|id=chr10:105495838..105495848,-|ontology_enrichment_celltype=CL:0002621!3.04e-16!3;CL:0002076!1.20e-15!43;CL:0000244!9.52e-13!4;CL:0000731!9.52e-13!4;CL:0002251!1.06e-11!21;CL:0000223!9.46e-11!59;CL:0000622!1.90e-10!5;CL:0000154!8.86e-09!6;CL:0002623!3.08e-08!3;CL:0000068!4.72e-08!3;CL:0000069!4.72e-08!3;CL:0000307!4.72e-08!3;CL:0000377!4.72e-08!3;CL:0002368!6.85e-07!13|ontology_enrichment_celltype_v019=CL:0002252;1.81e-40;1|ontology_enrichment_celltype_v019_2=CL:0002252,9.91e-41,1|ontology_enrichment_development_v019=UBERON:0009143;6.62e-41;1!UBERON:0008814;5.15e-21;2!UBERON:0010056;5.15e-21;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001949!3.04e-16!3;UBERON:0000166!3.10e-15!21;UBERON:0001004!1.19e-11!72;UBERON:0000165!4.05e-11!28;UBERON:0000930!4.05e-11!28;UBERON:0000161!6.28e-11!35;UBERON:0004119!1.75e-10!169;UBERON:0000925!1.75e-10!169;UBERON:0006595!1.75e-10!169;UBERON:0000365!2.70e-10!5;UBERON:0001444!2.48e-09!48;UBERON:0005910!1.18e-08!6;UBERON:0001723!2.76e-08!3;UBERON:0001033!2.76e-08!3;UBERON:0010056!2.76e-08!3;UBERON:0003102!4.15e-08!95;UBERON:0001041!6.74e-08!98;UBERON:0000078!1.90e-07!18;UBERON:0003126!1.90e-07!7;UBERON:0001005!1.90e-07!7;UBERON:0001007!3.09e-07!155;UBERON:0001555!3.09e-07!155;UBERON:0007026!3.09e-07!155;UBERON:0002372!5.13e-07!1;UBERON:0001961!5.13e-07!1;UBERON:0001744!5.13e-07!1;UBERON:0001735!5.13e-07!1;UBERON:0005178!5.84e-07!34;UBERON:0002224!5.84e-07!34;UBERON:0000065!8.86e-07!53;UBERON:0007029!8.97e-07!1;UBERON:0005181!9.81e-07!35|ontology_enrichment_uberon_v019=UBERON:0001043;1.92e-53;3!UBERON:0002372;1.81e-40;1!UBERON:0001961;1.81e-40;1!UBERON:0001744;1.81e-40;1!UBERON:0001042;1.81e-40;1!UBERON:0001735;1.81e-40;1!UBERON:0000341;5.15e-21;2!UBERON:0006562;5.15e-21;2!UBERON:0001723;1.71e-14;3!UBERON:0001033;1.71e-14;3!UBERON:0001041;2.18e-12;14!UBERON:0004921;3.81e-10;33!UBERON:0001555;7.23e-09;54!UBERON:0000974;6.55e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0001043,1.28e-53,3;UBERON:0009143,1.28e-53,3;UBERON:0002372,3.30e-40,1;UBERON:0001961,3.30e-40,1;UBERON:0001744,3.30e-40,1;UBERON:0001735,3.30e-40,1;UBERON:0000341,4.66e-21,2;UBERON:0001042,9.54e-17,10;UBERON:0009145,9.54e-17,10;UBERON:0006562,2.51e-15,11;UBERON:0001723,1.83e-14,3;UBERON:0001033,1.83e-14,3;UBERON:0010056,1.83e-14,3;UBERON:0001557,2.56e-09,19;UBERON:0000166,3.51e-08,22;UBERON:0001041,5.98e-08,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.960950336825531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03676934625681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0,0.691259661814092,0,0,0,0,0,0,0,0,0.588901401691458,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,1.70587185520785,0,0,0,0,0,0,1.08858373948481,0.342233301085281,1.01028079521881,0.502055437748735,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr10:105495838..105495848,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr10:105495838..105495848,- | |||
|id=chr10:105495838..105495848,- | |||
|ontology_enrichment_celltype=CL:0002621!3.04e-16!3;CL:0002076!1.20e-15!43;CL:0000244!9.52e-13!4;CL:0000731!9.52e-13!4;CL:0002251!1.06e-11!21;CL:0000223!9.46e-11!59;CL:0000622!1.90e-10!5;CL:0000154!8.86e-09!6;CL:0002623!3.08e-08!3;CL:0000068!4.72e-08!3;CL:0000069!4.72e-08!3;CL:0000307!4.72e-08!3;CL:0000377!4.72e-08!3;CL:0002368!6.85e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002252;1.81e-40;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,9.91e-41,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.62e-41;1!UBERON:0008814;5.15e-21;2!UBERON:0010056;5.15e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001043;1.92e-53;3!UBERON:0002372;1.81e-40;1!UBERON:0001961;1.81e-40;1!UBERON:0001744;1.81e-40;1!UBERON:0001042;1.81e-40;1!UBERON:0001735;1.81e-40;1!UBERON:0000341;5.15e-21;2!UBERON:0006562;5.15e-21;2!UBERON:0001723;1.71e-14;3!UBERON:0001033;1.71e-14;3!UBERON:0001041;2.18e-12;14!UBERON:0004921;3.81e-10;33!UBERON:0001555;7.23e-09;54!UBERON:0000974;6.55e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,1.28e-53,3;UBERON:0009143,1.28e-53,3;UBERON:0002372,3.30e-40,1;UBERON:0001961,3.30e-40,1;UBERON:0001744,3.30e-40,1;UBERON:0001735,3.30e-40,1;UBERON:0000341,4.66e-21,2;UBERON:0001042,9.54e-17,10;UBERON:0009145,9.54e-17,10;UBERON:0006562,2.51e-15,11;UBERON:0001723,1.83e-14,3;UBERON:0001033,1.83e-14,3;UBERON:0010056,1.83e-14,3;UBERON:0001557,2.56e-09,19;UBERON:0000166,3.51e-08,22;UBERON:0001041,5.98e-08,87 | |||
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|short_description=p@chr10:105495838..105495848,- | |||
}} |
Revision as of 11:32, 10 September 2013
Short description: | p@chr10:105495838..105495848, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:105495838..105495848, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 9.91e-41 | 1 |
Ontology term | p-value | n |
---|---|---|
esophagus | 1.28e-53 | 3 |
esophageal region | 1.28e-53 | 3 |
tonsil | 3.30e-40 | 1 |
mucosa-associated lymphoid tissue | 3.30e-40 | 1 |
lymphoid tissue | 3.30e-40 | 1 |
tonsillar ring | 3.30e-40 | 1 |
throat | 4.66e-21 | 2 |
chordate pharynx | 9.54e-17 | 10 |
pharyngeal region of foregut | 9.54e-17 | 10 |
pharynx | 2.51e-15 | 11 |
tongue | 1.83e-14 | 3 |
gustatory system | 1.83e-14 | 3 |
future tongue | 1.83e-14 | 3 |
upper respiratory tract | 2.56e-09 | 19 |
oral opening | 3.51e-08 | 22 |
foregut | 5.98e-08 | 87 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.