FFCP PHASE1:Hg19::chr10:126398401..126398405,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:126398401..126398405,-|id=chr10:126398401..126398405,-|ontology_enrichment_celltype=CL:0000838!2.64e-09!52;CL:0000542!5.63e-09!53;CL:0000051!5.63e-09!53;CL:0000037!3.24e-08!172;CL:0000566!3.24e-08!172;CL:0000988!8.93e-08!182;CL:0002087!1.83e-07!119;CL:0000738!2.06e-07!140;CL:0002032!4.97e-07!165;CL:0000837!4.97e-07!165|ontology_enrichment_celltype_v019=CL:0000623;1.83e-38;3!CL:0000511;9.72e-14;1!CL:0002625;9.72e-14;1!CL:0000216;9.72e-14;1!CL:0000542;5.10e-11;53!CL:0002393;3.27e-09;6!CL:0002397;3.27e-09;6!CL:0000236;3.60e-09;13!CL:0000047;9.86e-08;2|ontology_enrichment_celltype_v019_2=CL:0000623,1.62e-38,3;CL:0000825,1.62e-38,3;CL:0000838,1.56e-14,52;CL:0000542,3.04e-14,53;CL:0000051,3.04e-14,53;CL:0000511,6.65e-14,1;CL:0002625,6.65e-14,1;CL:0000216,6.65e-14,1;CL:0002087,1.41e-11,115;CL:0002031,4.84e-11,120;CL:0000738,1.38e-09,136;CL:0000236,1.42e-08,14;CL:0002032,6.94e-08,161;CL:0000837,6.94e-08,161;CL:0000037,1.69e-07,168;CL:0000988,4.81e-07,177|ontology_enrichment_development_v019=UBERON:0005425;9.72e-14;1!CL:0000051;5.10e-11;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.29e-14!115;UBERON:0002780!1.81e-10!41;UBERON:0001890!1.81e-10!41;UBERON:0006240!1.81e-10!41;UBERON:0001049!4.33e-10!57;UBERON:0005068!4.33e-10!57;UBERON:0006241!4.33e-10!57;UBERON:0007135!4.33e-10!57;UBERON:0003080!4.79e-10!42;UBERON:0001017!1.20e-09!82;UBERON:0005743!2.54e-09!86;UBERON:0000073!1.07e-08!94;UBERON:0001016!1.07e-08!94;UBERON:0002616!1.16e-08!59;UBERON:0000955!2.29e-08!69;UBERON:0006238!2.29e-08!69;UBERON:0002346!2.88e-08!90;UBERON:0001893!4.60e-08!34;UBERON:0003075!7.23e-08!86;UBERON:0007284!7.23e-08!86;UBERON:0002791!1.35e-07!33;UBERON:0002020!2.63e-07!34;UBERON:0003528!2.63e-07!34|ontology_enrichment_uberon_v019=UBERON:0001136;9.72e-14;1!UBERON:0000941;9.72e-14;1!UBERON:0001343;9.72e-14;1!UBERON:0007195;9.72e-14;1!UBERON:0001785;9.72e-14;1!UBERON:0002464;9.72e-14;1!UBERON:0004904;9.72e-14;1!UBERON:0001021;9.72e-14;1!UBERON:0004910;9.72e-14;1!UBERON:0004813;9.72e-14;1!UBERON:0003714;1.64e-07;2!UBERON:0005162;1.64e-07;2!UBERON:0000122;1.64e-07;2!UBERON:0004909;1.64e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.65e-14,1;UBERON:0001343,6.65e-14,1;UBERON:0004910,6.65e-14,1;UBERON:0005154,6.65e-14,1;UBERON:0005295,6.65e-14,1;UBERON:0004813,6.65e-14,1;UBERON:0005297,6.65e-14,1;UBERON:0005294,6.65e-14,1;UBERON:0010141,6.65e-14,1;UBERON:0005891,6.65e-14,1;UBERON:0000941,8.58e-14,1;UBERON:0001785,8.58e-14,1;UBERON:0002464,8.58e-14,1;UBERON:0004904,8.58e-14,1;UBERON:0001021,8.58e-14,1;UBERON:0003902,8.58e-14,1;UBERON:0005425,8.58e-14,1;UBERON:0007195,1.42e-13,1;UBERON:0004909,1.36e-07,2;UBERON:0003714,1.54e-07,2;UBERON:0005162,1.54e-07,2;UBERON:0000122,1.54e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0.383829398097213,0.77408061658038,0,0,0,0.309868802321207,0.284338464974843,0,1.10799081706375,1.00272223735071,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,1.70763890732835,1.17447437874188,1.14681968437569,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0.650296737799391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.403213486449465,1.33720097891754,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.66943437013739,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,1.57624608161542,2.15627574859517,2.18183161675572,0.254094624222463,2.60279707715243,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:126398401..126398405,- | |||
|id=chr10:126398401..126398405,- | |||
|ontology_enrichment_celltype=CL:0000838!2.64e-09!52;CL:0000542!5.63e-09!53;CL:0000051!5.63e-09!53;CL:0000037!3.24e-08!172;CL:0000566!3.24e-08!172;CL:0000988!8.93e-08!182;CL:0002087!1.83e-07!119;CL:0000738!2.06e-07!140;CL:0002032!4.97e-07!165;CL:0000837!4.97e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.83e-38;3!CL:0000511;9.72e-14;1!CL:0002625;9.72e-14;1!CL:0000216;9.72e-14;1!CL:0000542;5.10e-11;53!CL:0002393;3.27e-09;6!CL:0002397;3.27e-09;6!CL:0000236;3.60e-09;13!CL:0000047;9.86e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.62e-38,3;CL:0000825,1.62e-38,3;CL:0000838,1.56e-14,52;CL:0000542,3.04e-14,53;CL:0000051,3.04e-14,53;CL:0000511,6.65e-14,1;CL:0002625,6.65e-14,1;CL:0000216,6.65e-14,1;CL:0002087,1.41e-11,115;CL:0002031,4.84e-11,120;CL:0000738,1.38e-09,136;CL:0000236,1.42e-08,14;CL:0002032,6.94e-08,161;CL:0000837,6.94e-08,161;CL:0000037,1.69e-07,168;CL:0000988,4.81e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.72e-14;1!CL:0000051;5.10e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-14!115;UBERON:0002780!1.81e-10!41;UBERON:0001890!1.81e-10!41;UBERON:0006240!1.81e-10!41;UBERON:0001049!4.33e-10!57;UBERON:0005068!4.33e-10!57;UBERON:0006241!4.33e-10!57;UBERON:0007135!4.33e-10!57;UBERON:0003080!4.79e-10!42;UBERON:0001017!1.20e-09!82;UBERON:0005743!2.54e-09!86;UBERON:0000073!1.07e-08!94;UBERON:0001016!1.07e-08!94;UBERON:0002616!1.16e-08!59;UBERON:0000955!2.29e-08!69;UBERON:0006238!2.29e-08!69;UBERON:0002346!2.88e-08!90;UBERON:0001893!4.60e-08!34;UBERON:0003075!7.23e-08!86;UBERON:0007284!7.23e-08!86;UBERON:0002791!1.35e-07!33;UBERON:0002020!2.63e-07!34;UBERON:0003528!2.63e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;9.72e-14;1!UBERON:0000941;9.72e-14;1!UBERON:0001343;9.72e-14;1!UBERON:0007195;9.72e-14;1!UBERON:0001785;9.72e-14;1!UBERON:0002464;9.72e-14;1!UBERON:0004904;9.72e-14;1!UBERON:0001021;9.72e-14;1!UBERON:0004910;9.72e-14;1!UBERON:0004813;9.72e-14;1!UBERON:0003714;1.64e-07;2!UBERON:0005162;1.64e-07;2!UBERON:0000122;1.64e-07;2!UBERON:0004909;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.65e-14,1;UBERON:0001343,6.65e-14,1;UBERON:0004910,6.65e-14,1;UBERON:0005154,6.65e-14,1;UBERON:0005295,6.65e-14,1;UBERON:0004813,6.65e-14,1;UBERON:0005297,6.65e-14,1;UBERON:0005294,6.65e-14,1;UBERON:0010141,6.65e-14,1;UBERON:0005891,6.65e-14,1;UBERON:0000941,8.58e-14,1;UBERON:0001785,8.58e-14,1;UBERON:0002464,8.58e-14,1;UBERON:0004904,8.58e-14,1;UBERON:0001021,8.58e-14,1;UBERON:0003902,8.58e-14,1;UBERON:0005425,8.58e-14,1;UBERON:0007195,1.42e-13,1;UBERON:0004909,1.36e-07,2;UBERON:0003714,1.54e-07,2;UBERON:0005162,1.54e-07,2;UBERON:0000122,1.54e-07,2 | |||
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| |||
|short_description=p@chr10:126398401..126398405,- | |||
}} |
Revision as of 12:13, 10 September 2013
Short description: | p@chr10:126398401..126398405, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126398401..126398405, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.62e-38 | 3 |
pro-NK cell | 1.62e-38 | 3 |
lymphoid lineage restricted progenitor cell | 1.56e-14 | 52 |
lymphocyte | 3.04e-14 | 53 |
common lymphoid progenitor | 3.04e-14 | 53 |
androgen binding protein secreting cell | 6.65e-14 | 1 |
seminiferous tubule epithelial cell | 6.65e-14 | 1 |
Sertoli cell | 6.65e-14 | 1 |
nongranular leukocyte | 1.41e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 4.84e-11 | 120 |
leukocyte | 1.38e-09 | 136 |
B cell | 1.42e-08 | 14 |
hematopoietic oligopotent progenitor cell | 6.94e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.94e-08 | 161 |
hematopoietic stem cell | 1.69e-07 | 168 |
hematopoietic cell | 4.81e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.65e-14 | 1 |
seminiferous tubule of testis | 6.65e-14 | 1 |
epithelium of male gonad | 6.65e-14 | 1 |
epithelial cord | 6.65e-14 | 1 |
sex cord | 6.65e-14 | 1 |
seminiferous tubule epithelium | 6.65e-14 | 1 |
testis sex cord | 6.65e-14 | 1 |
genital ridge | 6.65e-14 | 1 |
primitive sex cord of indifferent gonad | 6.65e-14 | 1 |
coelomic epithelium | 6.65e-14 | 1 |
cranial nerve II | 8.58e-14 | 1 |
cranial nerve | 8.58e-14 | 1 |
nerve trunk | 8.58e-14 | 1 |
nerve connecting eye with brain | 8.58e-14 | 1 |
nerve | 8.58e-14 | 1 |
retinal neural layer | 8.58e-14 | 1 |
presumptive neural retina | 8.58e-14 | 1 |
stroma of bone marrow | 1.42e-13 | 1 |
epithelium of gonad | 1.36e-07 | 2 |
neural tissue | 1.54e-07 | 2 |
multi cell component structure | 1.54e-07 | 2 |
neuron projection bundle | 1.54e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.