FFCP PHASE1:Hg19::chr11:68133036..68133046,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:68133036..68133046,+|id=chr11:68133036..68133046,+|ontology_enrichment_celltype=CL:0002057!1.27e-18!42;CL:0000860!3.39e-17!45;CL:0002194!3.22e-13!63;CL:0000576!3.22e-13!63;CL:0000040!3.22e-13!63;CL:0000559!3.22e-13!63;CL:0002009!9.97e-13!65;CL:0000839!1.27e-11!70;CL:0000557!2.02e-11!71;CL:0000766!1.73e-10!76;CL:0002087!2.97e-10!119;CL:0002031!1.09e-09!124;CL:0000738!3.73e-08!140;CL:0002178!1.04e-07!3;CL:0000763!2.57e-07!112;CL:0000049!2.57e-07!112;CL:0002032!2.76e-07!165;CL:0000837!2.76e-07!165;CL:0002127!5.58e-07!1;CL:0000914!5.58e-07!1;CL:0000911!5.58e-07!1;CL:0000814!5.58e-07!1;CL:0002042!5.58e-07!1;CL:0002039!5.58e-07!1;CL:0002040!5.58e-07!1;CL:0002041!5.58e-07!1;CL:0000037!7.86e-07!172;CL:0000566!7.86e-07!172|ontology_enrichment_celltype_v019=CL:0002127;9.91e-41;1!CL:0000911;9.91e-41;1!CL:0000814;9.91e-41;1!CL:0000084;2.20e-07;25|ontology_enrichment_celltype_v019_2=CL:0002127,6.62e-41,1;CL:0000914,6.62e-41,1;CL:0000911,6.62e-41,1;CL:0000814,6.62e-41,1;CL:0002042,6.62e-41,1;CL:0002039,6.62e-41,1;CL:0002040,6.62e-41,1;CL:0002041,6.62e-41,1;CL:0000893,3.11e-21,2;CL:0002489,3.11e-21,2;CL:0000809,3.11e-21,2;CL:0000808,3.11e-21,2;CL:0000894,3.11e-21,2;CL:0000806,3.11e-21,2;CL:0000807,3.11e-21,2;CL:0000805,3.11e-21,2;CL:0002425,3.11e-21,2;CL:0000084,2.20e-07,25;CL:0000827,2.20e-07,25|ontology_enrichment_development_v019=CL:0002425;3.81e-21;2|ontology_enrichment_disease=DOID:3111!5.90e-07!1;DOID:3603!5.90e-07!1|ontology_enrichment_disease_v019=DOID:3111;9.91e-41;1!DOID:3603;9.91e-41;1!DOID:4929;6.30e-21;2!DOID:299;2.39e-07;25|ontology_enrichment_disease_v019_2=DOID:3111,9.91e-41,1;DOID:3603,9.91e-41,1;DOID:4929,6.96e-21,2;DOID:299,2.43e-07,25|ontology_enrichment_uberon=UBERON:0002371!7.96e-10!80;UBERON:0002390!1.30e-09!102;UBERON:0003061!1.30e-09!102;UBERON:0001474!6.00e-09!86;UBERON:0002193!1.83e-08!112;UBERON:0002405!3.70e-08!115;UBERON:0004765!3.24e-07!101;UBERON:0001434!3.24e-07!101;UBERON:0004913!6.96e-07!1;UBERON:0003703!6.96e-07!1;UBERON:0001174!6.96e-07!1;UBERON:0004914!6.96e-07!1|ontology_enrichment_uberon_v019=UBERON:0004913;2.70e-40;1!UBERON:0003703;2.70e-40;1!UBERON:0001174;2.70e-40;1!UBERON:0004914;2.70e-40;1!UBERON:0002114;1.96e-14;2!UBERON:0002394;3.60e-11;4!UBERON:0003928;3.60e-11;4!UBERON:0002108;3.35e-09;4!UBERON:0002294;6.21e-07;7!UBERON:0001173;6.21e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0004913,3.30e-40,1;UBERON:0003703,3.30e-40,1;UBERON:0001174,3.30e-40,1;UBERON:0004914,3.30e-40,1;UBERON:0002114,2.09e-14,2;UBERON:0002370,2.53e-11,4;UBERON:0005058,2.53e-11,4;UBERON:0009113,2.53e-11,4;UBERON:0003295,2.53e-11,4;UBERON:0005562,2.53e-11,4;UBERON:0002108,3.49e-09,4;UBERON:0003351,5.54e-08,6;UBERON:0002394,7.25e-08,6;UBERON:0003928,7.25e-08,6;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0.768482119587302,0.236482229888585,0.344745680736619,0,0,0,0.818718450173537,0,0,0,0,0.989553900560148,1.39624560335142,0.426224750532694,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80212859983818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,2.14245036494787,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53574548030352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:68133036..68133046,+ | |||
|id=chr11:68133036..68133046,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.27e-18!42;CL:0000860!3.39e-17!45;CL:0002194!3.22e-13!63;CL:0000576!3.22e-13!63;CL:0000040!3.22e-13!63;CL:0000559!3.22e-13!63;CL:0002009!9.97e-13!65;CL:0000839!1.27e-11!70;CL:0000557!2.02e-11!71;CL:0000766!1.73e-10!76;CL:0002087!2.97e-10!119;CL:0002031!1.09e-09!124;CL:0000738!3.73e-08!140;CL:0002178!1.04e-07!3;CL:0000763!2.57e-07!112;CL:0000049!2.57e-07!112;CL:0002032!2.76e-07!165;CL:0000837!2.76e-07!165;CL:0002127!5.58e-07!1;CL:0000914!5.58e-07!1;CL:0000911!5.58e-07!1;CL:0000814!5.58e-07!1;CL:0002042!5.58e-07!1;CL:0002039!5.58e-07!1;CL:0002040!5.58e-07!1;CL:0002041!5.58e-07!1;CL:0000037!7.86e-07!172;CL:0000566!7.86e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0002127;9.91e-41;1!CL:0000911;9.91e-41;1!CL:0000814;9.91e-41;1!CL:0000084;2.20e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.62e-41,1;CL:0000914,6.62e-41,1;CL:0000911,6.62e-41,1;CL:0000814,6.62e-41,1;CL:0002042,6.62e-41,1;CL:0002039,6.62e-41,1;CL:0002040,6.62e-41,1;CL:0002041,6.62e-41,1;CL:0000893,3.11e-21,2;CL:0002489,3.11e-21,2;CL:0000809,3.11e-21,2;CL:0000808,3.11e-21,2;CL:0000894,3.11e-21,2;CL:0000806,3.11e-21,2;CL:0000807,3.11e-21,2;CL:0000805,3.11e-21,2;CL:0002425,3.11e-21,2;CL:0000084,2.20e-07,25;CL:0000827,2.20e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002425;3.81e-21;2 | |||
|ontology_enrichment_disease=DOID:3111!5.90e-07!1;DOID:3603!5.90e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3111;9.91e-41;1!DOID:3603;9.91e-41;1!DOID:4929;6.30e-21;2!DOID:299;2.39e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,9.91e-41,1;DOID:3603,9.91e-41,1;DOID:4929,6.96e-21,2;DOID:299,2.43e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0002371!7.96e-10!80;UBERON:0002390!1.30e-09!102;UBERON:0003061!1.30e-09!102;UBERON:0001474!6.00e-09!86;UBERON:0002193!1.83e-08!112;UBERON:0002405!3.70e-08!115;UBERON:0004765!3.24e-07!101;UBERON:0001434!3.24e-07!101;UBERON:0004913!6.96e-07!1;UBERON:0003703!6.96e-07!1;UBERON:0001174!6.96e-07!1;UBERON:0004914!6.96e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.70e-40;1!UBERON:0003703;2.70e-40;1!UBERON:0001174;2.70e-40;1!UBERON:0004914;2.70e-40;1!UBERON:0002114;1.96e-14;2!UBERON:0002394;3.60e-11;4!UBERON:0003928;3.60e-11;4!UBERON:0002108;3.35e-09;4!UBERON:0002294;6.21e-07;7!UBERON:0001173;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,3.30e-40,1;UBERON:0003703,3.30e-40,1;UBERON:0001174,3.30e-40,1;UBERON:0004914,3.30e-40,1;UBERON:0002114,2.09e-14,2;UBERON:0002370,2.53e-11,4;UBERON:0005058,2.53e-11,4;UBERON:0009113,2.53e-11,4;UBERON:0003295,2.53e-11,4;UBERON:0005562,2.53e-11,4;UBERON:0002108,3.49e-09,4;UBERON:0003351,5.54e-08,6;UBERON:0002394,7.25e-08,6;UBERON:0003928,7.25e-08,6;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0.768482119587302,0.236482229888585,0.344745680736619,0,0,0,0.818718450173537,0,0,0,0,0.989553900560148,1.39624560335142,0.426224750532694,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80212859983818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,2.14245036494787,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53574548030352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:68133036..68133046,+ | |||
}} |
Revision as of 19:20, 10 September 2013
Short description: | p@chr11:68133036..68133046, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:68133036..68133046, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.62e-41 | 1 |
immature NK T cell | 6.62e-41 | 1 |
effector T cell | 6.62e-41 | 1 |
mature NK T cell | 6.62e-41 | 1 |
immature NK T cell stage IV | 6.62e-41 | 1 |
immature NK T cell stage I | 6.62e-41 | 1 |
immature NK T cell stage II | 6.62e-41 | 1 |
immature NK T cell stage III | 6.62e-41 | 1 |
thymocyte | 3.11e-21 | 2 |
double negative thymocyte | 3.11e-21 | 2 |
double-positive, alpha-beta thymocyte | 3.11e-21 | 2 |
DN4 thymocyte | 3.11e-21 | 2 |
DN1 thymic pro-T cell | 3.11e-21 | 2 |
DN2 thymocyte | 3.11e-21 | 2 |
DN3 thymocyte | 3.11e-21 | 2 |
immature single positive thymocyte | 3.11e-21 | 2 |
early T lineage precursor | 3.11e-21 | 2 |
T cell | 2.20e-07 | 25 |
pro-T cell | 2.20e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 3.30e-40 | 1 |
extrahepatic bile duct | 3.30e-40 | 1 |
common bile duct | 3.30e-40 | 1 |
duodenal papilla | 3.30e-40 | 1 |
duodenum | 2.09e-14 | 2 |
thymus | 2.53e-11 | 4 |
hemolymphoid system gland | 2.53e-11 | 4 |
thymic region | 2.53e-11 | 4 |
pharyngeal gland | 2.53e-11 | 4 |
thymus primordium | 2.53e-11 | 4 |
small intestine | 3.49e-09 | 4 |
pharyngeal epithelium | 5.54e-08 | 6 |
bile duct | 7.25e-08 | 6 |
digestive system duct | 7.25e-08 | 6 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 9.91e-41 | 1 |
mucinous cystadenocarcinoma | 9.91e-41 | 1 |
tubular adenocarcinoma | 6.96e-21 | 2 |
adenocarcinoma | 2.43e-07 | 25 |
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