FFCP PHASE1:Hg19::chr12:19650285..19650289,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:19650285..19650289,+|id=chr12:19650285..19650289,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000039;7.54e-13;7!CL:0000586;7.54e-13;7|ontology_enrichment_celltype_v019_2=CL:0000039,8.88e-13,7;CL:0000586,8.88e-13,7|ontology_enrichment_development_v019=UBERON:0009117;5.03e-09;10!UBERON:0005564;5.03e-09;10!UBERON:0004874;9.47e-07;1|ontology_enrichment_disease=DOID:3095!6.80e-07!22;DOID:2994!6.80e-07!22|ontology_enrichment_disease_v019=DOID:3095;7.33e-15;22!DOID:2994;7.33e-15;22!DOID:1799;2.94e-07;1!DOID:10165;2.94e-07;1!DOID:1798;2.94e-07;1|ontology_enrichment_disease_v019_2=DOID:3095,7.42e-15,22;DOID:2994,7.42e-15,22;DOID:1799,2.95e-07,1;DOID:10165,2.95e-07,1;DOID:1798,2.95e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003135;2.38e-12;11!UBERON:0000473;2.94e-11;8!UBERON:0002050;7.45e-11;5!UBERON:0005423;7.45e-11;5!UBERON:0000922;6.62e-09;49!UBERON:0005795;3.40e-07;1!UBERON:0002038;9.47e-07;1!UBERON:0000989;9.47e-07;1!UBERON:0008811;9.47e-07;1!UBERON:0009661;9.47e-07;1!UBERON:0002950;9.47e-07;1!UBERON:0001891;9.47e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.26e-12,11;UBERON:0000473,4.20e-11,8;UBERON:0000989,3.95e-07,1;UBERON:0008811,3.95e-07,1;UBERON:0006258,3.95e-07,1;UBERON:0005876,3.95e-07,1;UBERON:0004874,3.95e-07,1|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0.136874425072884,0.502170558379211,0.229240217243854,0.246301768349837,0.629686250509434,0.393364276848904,0.383829398097213,0,0,0,0,0.46480320348181,0.568676929949686,0,0.553995408531877,0.601633342410425,1.08505435357926,0.223915474239924,0,0,0.436194716338694,0,0.485168122375632,0.232429036905685,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0,0,0.449446968890169,0.612167784741805,0,0.639337125799041,0,0.398927315243264,0,0.870627715885752,0,0,0.502497330513487,0,0.217188844705117,0,0.736555271975129,0,0.211255286311942,0.212604299965044,0,0.336985893439485,0.150176892841506,0.16072558669708,0,0.39783335439818,0,0,0,0.889509253863555,0,0,0,0,0,0,0,1.14681968437569,0,0,0.263384084775077,0.786839080455332,0,0.411202997999018,0.501559486172034,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0.221533894583621,0.270803863765016,1.28091319725675,0.520237390239513,0.657751618414705,0,0.869409257205157,0.14828656316206,0,1.04535523804977,0.679856056185397,0,0,1.51811815211702,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.43917392846563,0.916853528483988,0.364295288292542,0,0.324547393654683,0.522389211897802,0.398873881556595,0.476981248610684,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0.208994966536811,0.516833518338658,0,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,1.31780417436063,0,0.436094052142534,0.496971951695318,0,0.662045904066094,0.286836620748814,0,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0.448346041655403,0.23486899728753,0.323745888736263,0.280901613404497,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0.675105328965065,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0.207322110030741,0,1.45990943630332,0,0,0,0,0,0,0.505754070234305,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0,0.234004265139238,0.297262324577456,0,0,0.425325291727159,0.179117045405697,0,0,0,0,0.621984346622316,0.144119953416961,0.6312121671319,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0.410952645100767,0,0.112085143993527,0.788123040807709,0.215627574859517,0.641715181398742,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0,0.431428401637234,0.640365346820666,0,0,0,0,0.61384789315225,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.232420756919918,0.120859449591622,0,0.184161977871793,0.34444334449382,0.182091168006717,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0.512900250232778,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:19650285..19650289,+ | |||
|id=chr12:19650285..19650289,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.54e-13;7!CL:0000586;7.54e-13;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.88e-13,7;CL:0000586,8.88e-13,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.03e-09;10!UBERON:0005564;5.03e-09;10!UBERON:0004874;9.47e-07;1 | |||
|ontology_enrichment_disease=DOID:3095!6.80e-07!22;DOID:2994!6.80e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.33e-15;22!DOID:2994;7.33e-15;22!DOID:1799;2.94e-07;1!DOID:10165;2.94e-07;1!DOID:1798;2.94e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.42e-15,22;DOID:2994,7.42e-15,22;DOID:1799,2.95e-07,1;DOID:10165,2.95e-07,1;DOID:1798,2.95e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.38e-12;11!UBERON:0000473;2.94e-11;8!UBERON:0002050;7.45e-11;5!UBERON:0005423;7.45e-11;5!UBERON:0000922;6.62e-09;49!UBERON:0005795;3.40e-07;1!UBERON:0002038;9.47e-07;1!UBERON:0000989;9.47e-07;1!UBERON:0008811;9.47e-07;1!UBERON:0009661;9.47e-07;1!UBERON:0002950;9.47e-07;1!UBERON:0001891;9.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.26e-12,11;UBERON:0000473,4.20e-11,8;UBERON:0000989,3.95e-07,1;UBERON:0008811,3.95e-07,1;UBERON:0006258,3.95e-07,1;UBERON:0005876,3.95e-07,1;UBERON:0004874,3.95e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0.136874425072884,0.502170558379211,0.229240217243854,0.246301768349837,0.629686250509434,0.393364276848904,0.383829398097213,0,0,0,0,0.46480320348181,0.568676929949686,0,0.553995408531877,0.601633342410425,1.08505435357926,0.223915474239924,0,0,0.436194716338694,0,0.485168122375632,0.232429036905685,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0,0,0.449446968890169,0.612167784741805,0,0.639337125799041,0,0.398927315243264,0,0.870627715885752,0,0,0.502497330513487,0,0.217188844705117,0,0.736555271975129,0,0.211255286311942,0.212604299965044,0,0.336985893439485,0.150176892841506,0.16072558669708,0,0.39783335439818,0,0,0,0.889509253863555,0,0,0,0,0,0,0,1.14681968437569,0,0,0.263384084775077,0.786839080455332,0,0.411202997999018,0.501559486172034,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0.221533894583621,0.270803863765016,1.28091319725675,0.520237390239513,0.657751618414705,0,0.869409257205157,0.14828656316206,0,1.04535523804977,0.679856056185397,0,0,1.51811815211702,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.43917392846563,0.916853528483988,0.364295288292542,0,0.324547393654683,0.522389211897802,0.398873881556595,0.476981248610684,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0.208994966536811,0.516833518338658,0,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,1.31780417436063,0,0.436094052142534,0.496971951695318,0,0.662045904066094,0.286836620748814,0,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0.448346041655403,0.23486899728753,0.323745888736263,0.280901613404497,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0.675105328965065,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0.207322110030741,0,1.45990943630332,0,0,0,0,0,0,0.505754070234305,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0,0.234004265139238,0.297262324577456,0,0,0.425325291727159,0.179117045405697,0,0,0,0,0.621984346622316,0.144119953416961,0.6312121671319,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0.410952645100767,0,0.112085143993527,0.788123040807709,0.215627574859517,0.641715181398742,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0,0.431428401637234,0.640365346820666,0,0,0,0,0.61384789315225,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.232420756919918,0.120859449591622,0,0.184161977871793,0.34444334449382,0.182091168006717,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0,0,0.412164046590889,0.366277859273374,0.41254749960294,0,0,0,0.290012154876366,0.616194468458578,0.614014698904518,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,1.29694662238543,0,0.79312517629427,0.213648142254946,0,0.245040215981032,0.185803175125719,0.28853842595289,0.284567373393656,0.159426272728822,0,0.191505370132367,0,0.324621940274555,0.280797178113459,0.228234679033192,0.47003968731907,2.50634477090067,0.50787533340481,0,0,0.425846237690326,0.343505344755765,0.307240764308458,0.447352215784832,0,0,0,0,0.811367035427949,0.33307196799782,0,0,0,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0.333926115068718,1.15362711958732,0.63337622438398,1.59398390600856,0.552567831062295,0.755798243562828,0.306806047506464,0.369254416383208,0,0.449341755736634,0.537063524026827,0.511572370226872,0.197286811273867,0,0,1.93866549219044,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0.796554137998498,0.254253650292766,0,0,0.874813840149763,0,1.77148277162768,0.60298219312704,0,0.331737779793674,0,0.438770794307945,0.32681539055697,0,0.307801034015188,0.113942055847001,0.23056390438806,1.166849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| |||
|short_description=p@chr12:19650285..19650289,+ | |||
}} |
Revision as of 22:04, 10 September 2013
Short description: | p@chr12:19650285..19650289, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:19650285..19650289, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.88e-13 | 7 |
germ cell | 8.88e-13 | 7 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.26e-12 | 11 |
testis | 4.20e-11 | 8 |
penis | 3.95e-07 | 1 |
intromittent organ | 3.95e-07 | 1 |
lateral plate mesenchyme | 3.95e-07 | 1 |
undifferentiated genital tubercle | 3.95e-07 | 1 |
somatopleure | 3.95e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.42e-15 | 22 |
germ cell cancer | 7.42e-15 | 22 |
islet cell tumor | 2.95e-07 | 1 |
endocrine pancreas cancer | 2.95e-07 | 1 |
pancreatic endocrine carcinoma | 2.95e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.