FFCP PHASE1:Hg19::chr12:27932375..27932389,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57542|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=29252|TSSclassifier=W|UniProt=Q9P2K6|association_with_transcript=-360bp_to_BC028742_5end|coexpression_cluster_id=C42|description=CAGE_peak_15_at_KLHDC5_5end|id=chr12:27932375..27932389,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002253;7.30e-14;2!CL:0002563;1.40e-07;4|ontology_enrichment_celltype_v019_2=CL:0002253,7.30e-14,2;CL:0002563,1.40e-07,4|ontology_enrichment_development_v019=UBERON:0005425;8.64e-26;1!UBERON:0006965;9.40e-14;2!UBERON:0003056;1.60e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;3.58e-26;1!DOID:1357;3.58e-26;1!DOID:5409;1.31e-07;4!DOID:0050615;3.14e-07;16|ontology_enrichment_disease_v019_2=DOID:0050619,3.58e-26,1;DOID:1357,3.58e-26,1;DOID:5409,1.31e-07,4;DOID:0050615,3.14e-07,16|ontology_enrichment_uberon=UBERON:0001893!1.96e-31!34;UBERON:0001869!3.61e-31!32;UBERON:0002780!6.51e-30!41;UBERON:0001890!6.51e-30!41;UBERON:0006240!6.51e-30!41;UBERON:0002791!1.57e-29!33;UBERON:0003080!4.99e-29!42;UBERON:0002619!1.00e-28!22;UBERON:0002020!1.40e-28!34;UBERON:0003528!1.40e-28!34;UBERON:0001950!1.90e-28!20;UBERON:0000073!2.31e-27!94;UBERON:0001016!2.31e-27!94;UBERON:0000955!2.54e-27!69;UBERON:0006238!2.54e-27!69;UBERON:0007023!9.73e-27!115;UBERON:0001049!1.14e-26!57;UBERON:0005068!1.14e-26!57;UBERON:0006241!1.14e-26!57;UBERON:0007135!1.14e-26!57;UBERON:0001017!3.54e-26!82;UBERON:0005743!5.92e-26!86;UBERON:0002616!1.77e-25!59;UBERON:0000956!8.94e-25!25;UBERON:0000203!8.94e-25!25;UBERON:0002346!9.73e-23!90;UBERON:0003075!3.30e-21!86;UBERON:0007284!3.30e-21!86;UBERON:0003056!1.05e-20!61;UBERON:0000924!1.14e-16!173;UBERON:0006601!1.14e-16!173;UBERON:0000033!2.39e-16!123;UBERON:0004121!1.98e-15!169;UBERON:0000153!4.18e-15!129;UBERON:0007811!4.18e-15!129;UBERON:0002021!4.44e-12!5;UBERON:0001872!1.41e-11!5;UBERON:0000200!5.16e-10!6;UBERON:0002771!5.42e-08!3;UBERON:0000025!6.04e-08!194;UBERON:0001871!2.74e-07!7|ontology_enrichment_uberon_v019=UBERON:0001764;3.58e-26;1!UBERON:0001825;3.58e-26;1!UBERON:0000941;8.64e-26;1!UBERON:0001785;8.64e-26;1!UBERON:0002464;8.64e-26;1!UBERON:0004904;8.64e-26;1!UBERON:0001021;8.64e-26;1!UBERON:0002021;1.34e-20;5!UBERON:0003714;1.29e-13;2!UBERON:0005162;1.29e-13;2!UBERON:0000122;1.29e-13;2!UBERON:0001052;1.40e-07;4!UBERON:0001242;1.40e-07;4!UBERON:0001262;1.40e-07;4!UBERON:0004786;1.40e-07;4!UBERON:0004808;1.40e-07;4!UBERON:0001277;1.40e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.58e-26,1;UBERON:0001825,3.58e-26,1;UBERON:0000941,7.62e-26,1;UBERON:0001785,7.62e-26,1;UBERON:0002464,7.62e-26,1;UBERON:0004904,7.62e-26,1;UBERON:0001021,7.62e-26,1;UBERON:0003902,7.62e-26,1;UBERON:0005425,7.62e-26,1;UBERON:0002021,1.64e-20,5;UBERON:0003714,1.21e-13,2;UBERON:0005162,1.21e-13,2;UBERON:0000122,1.21e-13,2;UBERON:0001052,1.40e-07,4;UBERON:0001242,1.40e-07,4;UBERON:0001262,1.40e-07,4;UBERON:0004786,1.40e-07,4;UBERON:0004808,1.40e-07,4;UBERON:0001277,1.40e-07,4;UBERON:0001781,1.80e-07,4|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,2.78947183551498,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,1.99613798001194,0,0,0,0,0,0,0,0,0.347249989866585,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2355276511142,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0,0.379864775735272,0,0,0,0.19980960958213,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57542 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=29252 | |||
|TSSclassifier=W | |||
|UniProt=Q9P2K6 | |||
|association_with_transcript=-360bp_to_BC028742_5end | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_15_at_KLHDC5_5end | |||
|id=chr12:27932375..27932389,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;7.30e-14;2!CL:0002563;1.40e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,7.30e-14,2;CL:0002563,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.64e-26;1!UBERON:0006965;9.40e-14;2!UBERON:0003056;1.60e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.58e-26;1!DOID:1357;3.58e-26;1!DOID:5409;1.31e-07;4!DOID:0050615;3.14e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.58e-26,1;DOID:1357,3.58e-26,1;DOID:5409,1.31e-07,4;DOID:0050615,3.14e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.96e-31!34;UBERON:0001869!3.61e-31!32;UBERON:0002780!6.51e-30!41;UBERON:0001890!6.51e-30!41;UBERON:0006240!6.51e-30!41;UBERON:0002791!1.57e-29!33;UBERON:0003080!4.99e-29!42;UBERON:0002619!1.00e-28!22;UBERON:0002020!1.40e-28!34;UBERON:0003528!1.40e-28!34;UBERON:0001950!1.90e-28!20;UBERON:0000073!2.31e-27!94;UBERON:0001016!2.31e-27!94;UBERON:0000955!2.54e-27!69;UBERON:0006238!2.54e-27!69;UBERON:0007023!9.73e-27!115;UBERON:0001049!1.14e-26!57;UBERON:0005068!1.14e-26!57;UBERON:0006241!1.14e-26!57;UBERON:0007135!1.14e-26!57;UBERON:0001017!3.54e-26!82;UBERON:0005743!5.92e-26!86;UBERON:0002616!1.77e-25!59;UBERON:0000956!8.94e-25!25;UBERON:0000203!8.94e-25!25;UBERON:0002346!9.73e-23!90;UBERON:0003075!3.30e-21!86;UBERON:0007284!3.30e-21!86;UBERON:0003056!1.05e-20!61;UBERON:0000924!1.14e-16!173;UBERON:0006601!1.14e-16!173;UBERON:0000033!2.39e-16!123;UBERON:0004121!1.98e-15!169;UBERON:0000153!4.18e-15!129;UBERON:0007811!4.18e-15!129;UBERON:0002021!4.44e-12!5;UBERON:0001872!1.41e-11!5;UBERON:0000200!5.16e-10!6;UBERON:0002771!5.42e-08!3;UBERON:0000025!6.04e-08!194;UBERON:0001871!2.74e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.58e-26;1!UBERON:0001825;3.58e-26;1!UBERON:0000941;8.64e-26;1!UBERON:0001785;8.64e-26;1!UBERON:0002464;8.64e-26;1!UBERON:0004904;8.64e-26;1!UBERON:0001021;8.64e-26;1!UBERON:0002021;1.34e-20;5!UBERON:0003714;1.29e-13;2!UBERON:0005162;1.29e-13;2!UBERON:0000122;1.29e-13;2!UBERON:0001052;1.40e-07;4!UBERON:0001242;1.40e-07;4!UBERON:0001262;1.40e-07;4!UBERON:0004786;1.40e-07;4!UBERON:0004808;1.40e-07;4!UBERON:0001277;1.40e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.58e-26,1;UBERON:0001825,3.58e-26,1;UBERON:0000941,7.62e-26,1;UBERON:0001785,7.62e-26,1;UBERON:0002464,7.62e-26,1;UBERON:0004904,7.62e-26,1;UBERON:0001021,7.62e-26,1;UBERON:0003902,7.62e-26,1;UBERON:0005425,7.62e-26,1;UBERON:0002021,1.64e-20,5;UBERON:0003714,1.21e-13,2;UBERON:0005162,1.21e-13,2;UBERON:0000122,1.21e-13,2;UBERON:0001052,1.40e-07,4;UBERON:0001242,1.40e-07,4;UBERON:0001262,1.40e-07,4;UBERON:0004786,1.40e-07,4;UBERON:0004808,1.40e-07,4;UBERON:0001277,1.40e-07,4;UBERON:0001781,1.80e-07,4 | |||
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|short_description=p15@KLHDC5 | |||
}} |
Revision as of 22:20, 10 September 2013
Short description: | p15@KLHDC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_KLHDC5_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | -360bp_to_BC028742_5end |
EntrezGene: | KLHDC5 |
HGNC: | 29252 |
UniProt: | Q9P2K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 7.30e-14 | 2 |
intestinal epithelial cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.58e-26 | 1 |
paranasal sinus | 3.58e-26 | 1 |
cranial nerve II | 7.62e-26 | 1 |
cranial nerve | 7.62e-26 | 1 |
nerve trunk | 7.62e-26 | 1 |
nerve connecting eye with brain | 7.62e-26 | 1 |
nerve | 7.62e-26 | 1 |
retinal neural layer | 7.62e-26 | 1 |
presumptive neural retina | 7.62e-26 | 1 |
occipital lobe | 1.64e-20 | 5 |
neural tissue | 1.21e-13 | 2 |
multi cell component structure | 1.21e-13 | 2 |
neuron projection bundle | 1.21e-13 | 2 |
rectum | 1.40e-07 | 4 |
intestinal mucosa | 1.40e-07 | 4 |
wall of intestine | 1.40e-07 | 4 |
gastrointestinal system mucosa | 1.40e-07 | 4 |
gastrointestinal system epithelium | 1.40e-07 | 4 |
intestinal epithelium | 1.40e-07 | 4 |
layer of retina | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.58e-26 | 1 |
maxillary sinus cancer | 3.58e-26 | 1 |
lung small cell carcinoma | 1.31e-07 | 4 |
respiratory system cancer | 3.14e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.