FFCP PHASE1:Hg19::chr15:54876150..54876191,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C36|description=CAGE_peak_at_chr15:54876150..54876191,+|id=chr15:54876150..54876191,+|ontology_enrichment_celltype=CL:0000860!4.82e-20!45;CL:0002057!2.50e-18!42;CL:0000839!6.98e-16!70;CL:0000557!1.52e-15!71;CL:0002194!1.47e-14!63;CL:0000576!1.47e-14!63;CL:0000040!1.47e-14!63;CL:0000559!1.47e-14!63;CL:0002031!2.28e-14!124;CL:0000766!5.37e-14!76;CL:0002009!6.87e-14!65;CL:0000738!3.81e-13!140;CL:0002087!1.14e-12!119;CL:0002032!9.46e-12!165;CL:0000837!9.46e-12!165;CL:0000763!5.83e-11!112;CL:0000049!5.83e-11!112;CL:0000037!8.34e-11!172;CL:0000566!8.34e-11!172;CL:0000988!1.35e-09!182|ontology_enrichment_celltype_v019=CL:0000945;8.48e-25;24!CL:0000860;2.54e-12;33!CL:0002057;2.54e-12;33!CL:0000946;3.76e-11;1!CL:0000786;3.76e-11;1!CL:0000473;7.04e-09;39!CL:0000234;7.04e-09;39!CL:0002087;4.08e-08;104!CL:0000542;9.56e-07;53|ontology_enrichment_celltype_v019_2=CL:0000945,7.72e-25,24;CL:0000826,7.72e-25,24;CL:0002087,1.67e-18,115;CL:0002031,1.24e-17,120;CL:0000738,2.81e-15,136;CL:0002032,2.33e-14,161;CL:0000837,2.33e-14,161;CL:0000838,7.33e-14,52;CL:0000037,1.19e-13,168;CL:0000542,1.41e-13,53;CL:0000051,1.41e-13,53;CL:0000988,7.97e-13,177;CL:0000946,3.76e-11,1;CL:0000786,3.76e-11,1;CL:0000980,3.76e-11,1;CL:0000860,3.29e-10,42;CL:0002057,3.29e-10,42;CL:0000473,7.61e-09,48;CL:0000234,7.61e-09,48;CL:0002194,6.21e-07,59;CL:0000576,6.21e-07,59;CL:0000040,6.21e-07,59;CL:0000559,6.21e-07,59|ontology_enrichment_development_v019=CL:0002057;1.10e-09;42!CL:0000051;9.56e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:630;5.05e-11;1!DOID:0050177;5.05e-11;1!DOID:0050427;5.05e-11;1!DOID:4960;1.21e-10;1!DOID:0070004;1.21e-10;1!DOID:2355;1.21e-10;1!DOID:0060058;3.41e-09;10|ontology_enrichment_disease_v019_2=DOID:630,5.05e-11,1;DOID:0050177,5.05e-11,1;DOID:0050427,5.05e-11,1;DOID:2355,9.97e-11,1;DOID:4960,1.10e-10,1;DOID:0070004,1.10e-10,1;DOID:0060058,3.22e-09,10|ontology_enrichment_uberon=UBERON:0002390!3.48e-16!102;UBERON:0003061!3.48e-16!102;UBERON:0002405!6.22e-16!115;UBERON:0002193!6.99e-16!112;UBERON:0002371!3.80e-14!80;UBERON:0001474!1.37e-12!86;UBERON:0004765!1.49e-09!101;UBERON:0001434!1.49e-09!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002405,7.42e-07,93;UBERON:0002371,8.53e-07,76|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,118.211538692081,123.561387122168,132.706377294863,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.436194716338694,1.13362783106643,0.242584061187816,0.929716147622738,2.05583944010913,0.619412741790207,0.863077176966451,0.256160706529101,0.709446689665756,0.344745680736619,1.93645405075148,0,1.12945403725563,1.91034305040492,0.674170453335254,0.918251677112708,1.28371610830437,0.639337125799041,0,0.797854630486527,0,0,0,0,0.251248665256743,2.60741459210101,0.434377689410233,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0.539107359730903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24823305145179,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,21.2856863969984,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0,42.3411730786079,0,3.41499734359842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0.366390373607449,0,0,0.156980256395025,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0.91227394607833,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.292357268344742,0,0.193978032976839,0,0,0,0.794858446811959,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0.0984274815147488,1.86281330544726,0,0,0,0,0.415440338029185,0,0,0,0,0.157611414598396,0.0524545881349981,0,0.537862017998534,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0.471612915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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr15:54876150..54876191,+ | |||
|id=chr15:54876150..54876191,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.82e-20!45;CL:0002057!2.50e-18!42;CL:0000839!6.98e-16!70;CL:0000557!1.52e-15!71;CL:0002194!1.47e-14!63;CL:0000576!1.47e-14!63;CL:0000040!1.47e-14!63;CL:0000559!1.47e-14!63;CL:0002031!2.28e-14!124;CL:0000766!5.37e-14!76;CL:0002009!6.87e-14!65;CL:0000738!3.81e-13!140;CL:0002087!1.14e-12!119;CL:0002032!9.46e-12!165;CL:0000837!9.46e-12!165;CL:0000763!5.83e-11!112;CL:0000049!5.83e-11!112;CL:0000037!8.34e-11!172;CL:0000566!8.34e-11!172;CL:0000988!1.35e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.48e-25;24!CL:0000860;2.54e-12;33!CL:0002057;2.54e-12;33!CL:0000946;3.76e-11;1!CL:0000786;3.76e-11;1!CL:0000473;7.04e-09;39!CL:0000234;7.04e-09;39!CL:0002087;4.08e-08;104!CL:0000542;9.56e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.72e-25,24;CL:0000826,7.72e-25,24;CL:0002087,1.67e-18,115;CL:0002031,1.24e-17,120;CL:0000738,2.81e-15,136;CL:0002032,2.33e-14,161;CL:0000837,2.33e-14,161;CL:0000838,7.33e-14,52;CL:0000037,1.19e-13,168;CL:0000542,1.41e-13,53;CL:0000051,1.41e-13,53;CL:0000988,7.97e-13,177;CL:0000946,3.76e-11,1;CL:0000786,3.76e-11,1;CL:0000980,3.76e-11,1;CL:0000860,3.29e-10,42;CL:0002057,3.29e-10,42;CL:0000473,7.61e-09,48;CL:0000234,7.61e-09,48;CL:0002194,6.21e-07,59;CL:0000576,6.21e-07,59;CL:0000040,6.21e-07,59;CL:0000559,6.21e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-09;42!CL:0000051;9.56e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;5.05e-11;1!DOID:0050177;5.05e-11;1!DOID:0050427;5.05e-11;1!DOID:4960;1.21e-10;1!DOID:0070004;1.21e-10;1!DOID:2355;1.21e-10;1!DOID:0060058;3.41e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.05e-11,1;DOID:0050177,5.05e-11,1;DOID:0050427,5.05e-11,1;DOID:2355,9.97e-11,1;DOID:4960,1.10e-10,1;DOID:0070004,1.10e-10,1;DOID:0060058,3.22e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.48e-16!102;UBERON:0003061!3.48e-16!102;UBERON:0002405!6.22e-16!115;UBERON:0002193!6.99e-16!112;UBERON:0002371!3.80e-14!80;UBERON:0001474!1.37e-12!86;UBERON:0004765!1.49e-09!101;UBERON:0001434!1.49e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,7.42e-07,93;UBERON:0002371,8.53e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,118.211538692081,123.561387122168,132.706377294863,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.436194716338694,1.13362783106643,0.242584061187816,0.929716147622738,2.05583944010913,0.619412741790207,0.863077176966451,0.256160706529101,0.709446689665756,0.344745680736619,1.93645405075148,0,1.12945403725563,1.91034305040492,0.674170453335254,0.918251677112708,1.28371610830437,0.639337125799041,0,0.797854630486527,0,0,0,0,0.251248665256743,2.60741459210101,0.434377689410233,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0.539107359730903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24823305145179,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,21.2856863969984,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0,42.3411730786079,0,3.41499734359842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0.366390373607449,0,0,0.156980256395025,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0.91227394607833,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.292357268344742,0,0.193978032976839,0,0,0,0.794858446811959,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0.0984274815147488,1.86281330544726,0,0,0,0,0.415440338029185,0,0,0,0,0.157611414598396,0.0524545881349981,0,0.537862017998534,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0.496166021811951,0.988058159489721,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963099152036517,0,0,0,0,0,0,0,0.438568099157414,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0.106691729694141,1.72214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577628330751691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0.175871244359621,0,0,0,0,0,0,34.3397282916222,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,18.7889373138866,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.248298857183432,0.112131862580613,0,0,0,0,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,5.44966436915496 | |||
|short_description=p@chr15:54876150..54876191,+ | |||
}} |
Revision as of 07:29, 11 September 2013
Short description: | p@chr15:54876150..54876191, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:54876150..54876191, + |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.72e-25 | 24 |
pro-B cell | 7.72e-25 | 24 |
nongranular leukocyte | 1.67e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.24e-17 | 120 |
leukocyte | 2.81e-15 | 136 |
hematopoietic oligopotent progenitor cell | 2.33e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.33e-14 | 161 |
lymphoid lineage restricted progenitor cell | 7.33e-14 | 52 |
hematopoietic stem cell | 1.19e-13 | 168 |
lymphocyte | 1.41e-13 | 53 |
common lymphoid progenitor | 1.41e-13 | 53 |
hematopoietic cell | 7.97e-13 | 177 |
antibody secreting cell | 3.76e-11 | 1 |
plasma cell | 3.76e-11 | 1 |
plasmablast | 3.76e-11 | 1 |
classical monocyte | 3.29e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.29e-10 | 42 |
defensive cell | 7.61e-09 | 48 |
phagocyte | 7.61e-09 | 48 |
monopoietic cell | 6.21e-07 | 59 |
monocyte | 6.21e-07 | 59 |
monoblast | 6.21e-07 | 59 |
promonocyte | 6.21e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
immune system | 7.42e-07 | 93 |
bone marrow | 8.53e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.05e-11 | 1 |
monogenic disease | 5.05e-11 | 1 |
xeroderma pigmentosum | 5.05e-11 | 1 |
anemia | 9.97e-11 | 1 |
bone marrow cancer | 1.10e-10 | 1 |
myeloma | 1.10e-10 | 1 |
lymphoma | 3.22e-09 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.