FFCP PHASE1:Hg19::chr17:26694801..26694812,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=645832|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=32942|TSSclassifier=W|UniProt=C9JDG5|association_with_transcript=174bp_to_ENST00000438614_5end|coexpression_cluster_id=C5|description=CAGE_peak_5_at_SEBOX_5end|id=chr17:26694801..26694812,-|ontology_enrichment_celltype=CL:0000181!6.37e-39!12;CL:0000417!6.37e-39!12;CL:0000668!6.37e-39!12;CL:0000414!6.37e-39!12;CL:0000412!6.37e-39!12;CL:0000182!6.37e-39!12;CL:0000223!4.60e-11!59;CL:0002563!1.92e-08!4|ontology_enrichment_celltype_v019=CL:0000182;1.65e-33;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.72e-33,12;CL:0000223,2.67e-07,58|ontology_enrichment_development_v019=UBERON:0004161;7.24e-21;11!UBERON:0009497;8.82e-18;13!UBERON:0001041;4.27e-08;30!UBERON:0003104;4.27e-08;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.78e-38!19;UBERON:0006925!4.78e-38!19;UBERON:0008836!4.78e-38!19;UBERON:0009497!1.60e-34!25;UBERON:0000015!1.60e-34!25;UBERON:0002423!1.60e-34!25;UBERON:0006235!1.60e-34!25;UBERON:0004161!1.60e-34!25;UBERON:0008835!1.21e-32!22;UBERON:0003894!1.21e-32!22;UBERON:0009854!3.72e-31!23;UBERON:0007499!1.55e-28!25;UBERON:0005057!2.24e-27!26;UBERON:0009856!2.24e-27!26;UBERON:0002365!1.06e-22!31;UBERON:0002330!1.06e-22!31;UBERON:0003929!3.88e-21!54;UBERON:0002368!6.41e-20!35;UBERON:0005911!9.98e-18!82;UBERON:0005172!1.68e-17!55;UBERON:0005173!1.68e-17!55;UBERON:0002417!1.44e-15!61;UBERON:0000916!1.44e-15!61;UBERON:0000949!3.97e-15!45;UBERON:0004921!1.03e-11!129;UBERON:0004185!1.03e-11!129;UBERON:0000077!1.05e-11!130;UBERON:0002530!3.81e-11!59;UBERON:0005177!4.38e-11!107;UBERON:0001007!1.21e-10!155;UBERON:0001555!1.21e-10!155;UBERON:0007026!1.21e-10!155;UBERON:0001041!1.64e-10!98;UBERON:0009569!2.33e-10!113;UBERON:0004119!1.67e-09!169;UBERON:0000925!1.67e-09!169;UBERON:0006595!1.67e-09!169;UBERON:0000466!5.06e-09!126;UBERON:0002079!6.16e-09!1;UBERON:0001301!1.22e-08!1;UBERON:0001052!1.65e-08!4;UBERON:0001242!1.92e-08!4;UBERON:0001262!1.92e-08!4;UBERON:0004786!1.92e-08!4;UBERON:0004808!1.92e-08!4;UBERON:0001277!1.92e-08!4;UBERON:0003914!2.28e-08!118;UBERON:0000025!8.06e-08!194;UBERON:0001048!3.37e-07!168;UBERON:0004907!5.73e-07!5;UBERON:0003350!6.45e-07!5;UBERON:0000490!7.94e-07!138|ontology_enrichment_uberon_v019=UBERON:0002107;6.71e-47;19!UBERON:0006925;6.71e-47;19!UBERON:0002423;9.75e-36;25!UBERON:0002365;5.96e-29;31!UBERON:0002330;5.96e-29;31!UBERON:0002368;5.27e-25;33!UBERON:0000949;1.91e-17;43!UBERON:0005172;1.04e-12;52!UBERON:0005173;1.04e-12;52!UBERON:0002417;1.41e-10;58!UBERON:0000916;1.41e-10;58!UBERON:0002530;1.19e-08;57!UBERON:0001007;1.60e-07;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.99e-47,19;UBERON:0006925,6.99e-47,19;UBERON:0008836,6.99e-47,19;UBERON:0008835,1.52e-40,22;UBERON:0003894,1.52e-40,22;UBERON:0009854,8.47e-39,23;UBERON:0007499,1.00e-35,25;UBERON:0009497,1.00e-35,25;UBERON:0000015,1.00e-35,25;UBERON:0002423,1.00e-35,25;UBERON:0006235,1.00e-35,25;UBERON:0004161,1.00e-35,25;UBERON:0009856,2.30e-34,26;UBERON:0002365,7.10e-29,31;UBERON:0002330,7.10e-29,31;UBERON:0002368,1.31e-25,35;UBERON:0000949,5.65e-20,45;UBERON:0003929,1.11e-16,54;UBERON:0005172,1.11e-16,54;UBERON:0005173,1.11e-16,54;UBERON:0002530,2.79e-15,59;UBERON:0002417,4.99e-15,60;UBERON:0000916,4.99e-15,60;UBERON:0005911,4.99e-11,82;UBERON:0001041,2.13e-10,87;UBERON:0005177,5.79e-09,101;UBERON:0009569,4.38e-08,112;UBERON:0003914,9.71e-08,117;UBERON:0004921,1.31e-07,118;UBERON:0005256,2.02e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,34.2238594018943,8.84544495009863,19.4960669204863,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7301702225266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=645832 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32942 | |||
|TSSclassifier=W | |||
|UniProt=C9JDG5 | |||
|association_with_transcript=174bp_to_ENST00000438614_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_SEBOX_5end | |||
|id=chr17:26694801..26694812,- | |||
|ontology_enrichment_celltype=CL:0000181!6.37e-39!12;CL:0000417!6.37e-39!12;CL:0000668!6.37e-39!12;CL:0000414!6.37e-39!12;CL:0000412!6.37e-39!12;CL:0000182!6.37e-39!12;CL:0000223!4.60e-11!59;CL:0002563!1.92e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.65e-33;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.72e-33,12;CL:0000223,2.67e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.24e-21;11!UBERON:0009497;8.82e-18;13!UBERON:0001041;4.27e-08;30!UBERON:0003104;4.27e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.78e-38!19;UBERON:0006925!4.78e-38!19;UBERON:0008836!4.78e-38!19;UBERON:0009497!1.60e-34!25;UBERON:0000015!1.60e-34!25;UBERON:0002423!1.60e-34!25;UBERON:0006235!1.60e-34!25;UBERON:0004161!1.60e-34!25;UBERON:0008835!1.21e-32!22;UBERON:0003894!1.21e-32!22;UBERON:0009854!3.72e-31!23;UBERON:0007499!1.55e-28!25;UBERON:0005057!2.24e-27!26;UBERON:0009856!2.24e-27!26;UBERON:0002365!1.06e-22!31;UBERON:0002330!1.06e-22!31;UBERON:0003929!3.88e-21!54;UBERON:0002368!6.41e-20!35;UBERON:0005911!9.98e-18!82;UBERON:0005172!1.68e-17!55;UBERON:0005173!1.68e-17!55;UBERON:0002417!1.44e-15!61;UBERON:0000916!1.44e-15!61;UBERON:0000949!3.97e-15!45;UBERON:0004921!1.03e-11!129;UBERON:0004185!1.03e-11!129;UBERON:0000077!1.05e-11!130;UBERON:0002530!3.81e-11!59;UBERON:0005177!4.38e-11!107;UBERON:0001007!1.21e-10!155;UBERON:0001555!1.21e-10!155;UBERON:0007026!1.21e-10!155;UBERON:0001041!1.64e-10!98;UBERON:0009569!2.33e-10!113;UBERON:0004119!1.67e-09!169;UBERON:0000925!1.67e-09!169;UBERON:0006595!1.67e-09!169;UBERON:0000466!5.06e-09!126;UBERON:0002079!6.16e-09!1;UBERON:0001301!1.22e-08!1;UBERON:0001052!1.65e-08!4;UBERON:0001242!1.92e-08!4;UBERON:0001262!1.92e-08!4;UBERON:0004786!1.92e-08!4;UBERON:0004808!1.92e-08!4;UBERON:0001277!1.92e-08!4;UBERON:0003914!2.28e-08!118;UBERON:0000025!8.06e-08!194;UBERON:0001048!3.37e-07!168;UBERON:0004907!5.73e-07!5;UBERON:0003350!6.45e-07!5;UBERON:0000490!7.94e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.71e-47;19!UBERON:0006925;6.71e-47;19!UBERON:0002423;9.75e-36;25!UBERON:0002365;5.96e-29;31!UBERON:0002330;5.96e-29;31!UBERON:0002368;5.27e-25;33!UBERON:0000949;1.91e-17;43!UBERON:0005172;1.04e-12;52!UBERON:0005173;1.04e-12;52!UBERON:0002417;1.41e-10;58!UBERON:0000916;1.41e-10;58!UBERON:0002530;1.19e-08;57!UBERON:0001007;1.60e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.99e-47,19;UBERON:0006925,6.99e-47,19;UBERON:0008836,6.99e-47,19;UBERON:0008835,1.52e-40,22;UBERON:0003894,1.52e-40,22;UBERON:0009854,8.47e-39,23;UBERON:0007499,1.00e-35,25;UBERON:0009497,1.00e-35,25;UBERON:0000015,1.00e-35,25;UBERON:0002423,1.00e-35,25;UBERON:0006235,1.00e-35,25;UBERON:0004161,1.00e-35,25;UBERON:0009856,2.30e-34,26;UBERON:0002365,7.10e-29,31;UBERON:0002330,7.10e-29,31;UBERON:0002368,1.31e-25,35;UBERON:0000949,5.65e-20,45;UBERON:0003929,1.11e-16,54;UBERON:0005172,1.11e-16,54;UBERON:0005173,1.11e-16,54;UBERON:0002530,2.79e-15,59;UBERON:0002417,4.99e-15,60;UBERON:0000916,4.99e-15,60;UBERON:0005911,4.99e-11,82;UBERON:0001041,2.13e-10,87;UBERON:0005177,5.79e-09,101;UBERON:0009569,4.38e-08,112;UBERON:0003914,9.71e-08,117;UBERON:0004921,1.31e-07,118;UBERON:0005256,2.02e-07,122 | |||
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|short_description=p5@SEBOX | |||
}} |
Revision as of 12:43, 11 September 2013
Short description: | p5@SEBOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SEBOX_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 174bp_to_ENST00000438614_5end |
EntrezGene: | SEBOX |
HGNC: | 32942 |
UniProt: | C9JDG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.72e-33 | 12 |
endodermal cell | 2.67e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 6.99e-47 | 19 |
digestive gland | 6.99e-47 | 19 |
liver bud | 6.99e-47 | 19 |
hepatic diverticulum | 1.52e-40 | 22 |
liver primordium | 1.52e-40 | 22 |
digestive tract diverticulum | 8.47e-39 | 23 |
epithelial sac | 1.00e-35 | 25 |
epithelium of foregut-midgut junction | 1.00e-35 | 25 |
anatomical boundary | 1.00e-35 | 25 |
hepatobiliary system | 1.00e-35 | 25 |
foregut-midgut junction | 1.00e-35 | 25 |
septum transversum | 1.00e-35 | 25 |
sac | 2.30e-34 | 26 |
exocrine gland | 7.10e-29 | 31 |
exocrine system | 7.10e-29 | 31 |
endocrine gland | 1.31e-25 | 35 |
endocrine system | 5.65e-20 | 45 |
gut epithelium | 1.11e-16 | 54 |
abdomen element | 1.11e-16 | 54 |
abdominal segment element | 1.11e-16 | 54 |
gland | 2.79e-15 | 59 |
abdominal segment of trunk | 4.99e-15 | 60 |
abdomen | 4.99e-15 | 60 |
endo-epithelium | 4.99e-11 | 82 |
foregut | 2.13e-10 | 87 |
trunk region element | 5.79e-09 | 101 |
subdivision of trunk | 4.38e-08 | 112 |
epithelial tube | 9.71e-08 | 117 |
subdivision of digestive tract | 1.31e-07 | 118 |
trunk mesenchyme | 2.02e-07 | 122 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.