FFCP PHASE1:Hg19::chr19:35500040..35500063,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=17bp_to_ENST00000424536_5end|description=CAGE_peak_3_at_ENST00000424536_5end|id=chr19:35500040..35500063,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002619;3.09e-14;3!CL:0002262;4.60e-10;2!CL:1000398;4.60e-10;2!CL:0000775;1.47e-07;3!CL:0002567;5.58e-07;3|ontology_enrichment_celltype_v019_2=CL:0002619,1.76e-14,3;CL:0002262,2.92e-10,2;CL:1000398,2.92e-10,2;CL:0000766,3.69e-08,72;CL:0000775,1.43e-07,3;CL:0002194,2.76e-07,59;CL:0000576,2.76e-07,59;CL:0000040,2.76e-07,59;CL:0000559,2.76e-07,59;CL:0002567,4.67e-07,3;CL:0002009,5.53e-07,61|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001281;4.60e-10;2!UBERON:0003497;4.60e-10;2!UBERON:0003909;4.60e-10;2!UBERON:0003835;4.60e-10;2!UBERON:0001280;5.58e-07;3!UBERON:0004647;5.58e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.92e-10,2;UBERON:0003497,2.92e-10,2;UBERON:0003909,2.92e-10,2;UBERON:0003835,2.92e-10,2;UBERON:0001280,4.13e-07,3;UBERON:0004647,4.13e-07,3;UBERON:0005171,4.13e-07,3|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0,0,0.697801167972428,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.273748850145768,0,0.229240217243854,0.0821005894499457,0,0.393364276848904,0,0,0.919421224478927,0,0.739508020333575,0,0,0.293600439334847,0,0,0.434021741431704,1.34349284543955,1.94336199611388,1.28787783817093,0.581592955118259,0,0,0.464858073811369,0,0,0,0.256160706529101,0,1.37898272294647,0,0,0.188242339542605,0.272906150057846,0,3.97909060082173,0.962787081228281,2.55734850319616,0.989553900560148,0.199463657621632,0,2.03146467040009,1.70215567407342,1.24564449799115,0,0,0.217188844705117,1.81619850790011,0.368277635987565,0.949387162322653,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0.616804496998528,0.501559486172034,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0.664601683750863,0.541607727530031,0.128091319725675,0.390178042679635,0,0.276350017785848,0.289803085735052,0.444859689486181,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0.370784442784429,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0.66944122552934,0.805658634218294,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0.112611480483322,0,0.949265659568129,0.549605231791222,0,0,0,0,0.25326102332916,0,0,0,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0,0,0,0.989067717114227,0,0,0.168336113954066,0,0,0,0,0.600952235626387,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.386521706326594,0.545492241181669,0.573609190778008,0.853815942907168,0,0.464775771478074,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,1.4763109092493,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0.088048434013226,0.621984346622316,0.144119953416961,0.50496973370552,0.063497894292169,0,1.17217447210047,1.71072446022705,0.308482478109971,0.300343057843917,0.571652865261156,0.112131084345361,0,0,0.129271715757778,0,1.690605505112,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,1.2162378064119,0.502257091432126,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0.749007023947182,2.99161459204025,2.07207756718018,0,1.00034104211935,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,0.300946099727719,2.27407504055985,0,0,0,0.434418072340414,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0.640695746278505,0,0.321707842287215,0,0,0.532685175939381,0,1.03850885836724,0.232420756919918,0.241718899183244,0.601519410909855,0.184161977871793,0.229628896329213,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0,0.328014645699706,0.325378394664303,0.515205058238611,0.0915694648183434,0.082509499920588,0,0,0,0.386682873168488,0.154048617114644,0.307007349452259,0.137836572484531,0.429680979473094,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENST00000424536_5end | |||
|description=CAGE_peak_3_at_ENST00000424536_5end | |||
|id=chr19:35500040..35500063,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002619;3.09e-14;3!CL:0002262;4.60e-10;2!CL:1000398;4.60e-10;2!CL:0000775;1.47e-07;3!CL:0002567;5.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.76e-14,3;CL:0002262,2.92e-10,2;CL:1000398,2.92e-10,2;CL:0000766,3.69e-08,72;CL:0000775,1.43e-07,3;CL:0002194,2.76e-07,59;CL:0000576,2.76e-07,59;CL:0000040,2.76e-07,59;CL:0000559,2.76e-07,59;CL:0002567,4.67e-07,3;CL:0002009,5.53e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;4.60e-10;2!UBERON:0003497;4.60e-10;2!UBERON:0003909;4.60e-10;2!UBERON:0003835;4.60e-10;2!UBERON:0001280;5.58e-07;3!UBERON:0004647;5.58e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.92e-10,2;UBERON:0003497,2.92e-10,2;UBERON:0003909,2.92e-10,2;UBERON:0003835,2.92e-10,2;UBERON:0001280,4.13e-07,3;UBERON:0004647,4.13e-07,3;UBERON:0005171,4.13e-07,3 | |||
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| |||
|short_description=p3@ENST00000424536 | |||
}} |
Revision as of 20:03, 11 September 2013
Short description: | p3@ENST00000424536 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENST00000424536_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000424536_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.76e-14 | 3 |
endothelial cell of sinusoid | 2.92e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.92e-10 | 2 |
myeloid leukocyte | 3.69e-08 | 72 |
neutrophil | 1.43e-07 | 3 |
monopoietic cell | 2.76e-07 | 59 |
monocyte | 2.76e-07 | 59 |
monoblast | 2.76e-07 | 59 |
promonocyte | 2.76e-07 | 59 |
light melanocyte | 4.67e-07 | 3 |
macrophage dendritic cell progenitor | 5.53e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.92e-10 | 2 |
abdomen blood vessel | 2.92e-10 | 2 |
sinusoid | 2.92e-10 | 2 |
abdominal segment blood vessel | 2.92e-10 | 2 |
liver parenchyma | 4.13e-07 | 3 |
liver lobule | 4.13e-07 | 3 |
hepatic duct | 4.13e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.