FFCP PHASE1:Hg19::chr3:13009182..13009236,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9922|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29112|TSSclassifier=S|UniProt=Q6DN90|association_with_transcript=-14bp_to_ENST00000273221_5end|description=CAGE_peak_1_at_IQSEC1_5end|id=chr3:13009182..13009236,-|ontology_enrichment_celltype=CL:0000057!1.87e-08!75|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000057,6.78e-09,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.68e-12!659;UBERON:0003102!4.90e-10!95;UBERON:0000475!1.56e-08!365;UBERON:0007023!2.26e-08!115;UBERON:0000467!1.13e-07!625;UBERON:0000480!2.00e-07!626;UBERON:0009569!2.78e-07!113|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.32e-09,99;UBERON:0007023,2.02e-08,114;UBERON:0009569,2.55e-07,112;UBERON:0004119,5.04e-07,160;UBERON:0000925,5.04e-07,160;UBERON:0006595,5.04e-07,160|phase1_expression=5.63202975738726,8.34992043174834,6.3429481843187,5.00366491765652,2.23480547213644,5.23403114460221,2.53299878168311,1.26343974685366,8.35794010239483,2.45733936501509,4.88460817580699,5.24259293112413,7.3854753903967,1.8564952944007,4.30816588446291,2.01697543935533,1.80808358407193,1.46062018077475,3.41552959153355,5.66356867153224,7.54802557603736,9.71709636582072,4.29353980696585,2.73748850145768,4.6450776650077,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,1.08371286321253,1.83884244895785,6.6265302131215,9.98335827450327,0,0,3.22960483268332,0.553995408531877,0.401088894940283,0.651032612147555,9.85228086655667,5.83008598834163,10.0454471377333,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,1.21079900526674,0.368277635987565,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,5.28685314316103,2.80254281490768,4.74091352595139,0.196709770113833,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0.473554504088034,1.64225599384209,1.00803371612366,2.67440195783507,0.724122019413995,0,2.01210257911091,2.68511379871414,7.22878304769133,15.0401373190767,10.2841028462185,5.5670016293577,27.7381876072502,2.74150969775797,4.65631734671384,4.30390449896318,8.77559805834675,5.46442932438813,5.56176664176644,22.3937701621732,16.0199358315326,11.3014266441035,6.91622810485492,2.85997455390064,2.60020250930695,3.9752481473341,3.4409383804245,5.20710752411391,9.04492707078415,4.61449379830897,4.67700671298115,5.64286409649389,4.13466814670926,7.47109151642091,3.68192674041137,3.62546385398232,5.32190474002959,6.83373761134875,7.72092468726324,7.29127753093584,5.00078478390847,10.7774098860562,7.65758067286591,12.2653309972707,5.69559395740877,6.96166626935548,0,0,7.84969293856562,6.46063537203914,5.19185097824777,5.42877641334197,4.01571269048339,8.51204117276057,7.28880880184999,5.33744978648525,7.15335890409764,8.09148692039392,5.25371621071783,4.7403951902903,5.2975099675726,3.45705554687999,7.49828581868149,5.93104145977609,6.84566185853339,5.82849854152024,6.45889742540707,6.96053660782966,5.61803226808994,5.9204709663919,5.65037859634133,8.88601718111583,13.0680314301026,9.89067717114228,6.37112953356618,8.62341770179486,3.70339450698946,6.38104451347017,6.64953877162039,9.65750765937843,9.80760946556863,10.3664260645552,2.83580457900053,12.5572744982203,8.5422955527427,3.81477422087211,9.00273288253207,6.49230934202165,12.6243864622358,8.18914167858995,8.60759294430458,5.45647228902712,10.0973509697646,9.20498986422994,4.52608959092673,10.2952781829818,7.05264687593482,4.40857540007268,7.73043412653187,5.72766853240753,6.59650569394709,4.87894824518382,3.84336328132307,4.53156377191122,3.62813692553797,4.28945446488568,2.18986415445498,10.9514672630871,4.5026865673502,12.4321429217232,6.96551892047969,5.0531563716871,2.9576700009961,1.68584690078102,3.61516544825223,2.53676137284506,1.08939722046203,2.13543557199987,2.83145747136345,0.98110732562673,2.30848294167834,16.2394200017423,8.41450642820675,8.6430542379594,11.7606969108434,5.07020139287323,3.9313088667105,6.49868897349544,0,5.411491295897,2.74508496477641,9.32877425973317,5.62008766288098,5.32803553781643,5.37012981919472,8.79682424337877,7.27954349695705,1.44331342025273,2.78232971940184,1.6437217193015,2.02113026865503,0.925971025153221,0.951270761172991,7.11183958163348,12.0188062693282,8.12516120088411,0.468008530278475,1.63494278517601,1.87467667973554,3.52762469217605,2.1266264586358,2.7763142037883,3.77824120068151,5.36735750831296,0.985326475791887,2.99364675644969,20.940139669618,18.8797138976219,20.3250317816472,5.52431680341871,8.40374536228211,15.2382681373061,8.55362230113526,5.34702962057282,3.30377363628309,6.28818151787272,6.72786506072164,6.10344096366592,4.4002971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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9922 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29112 | |||
|TSSclassifier=S | |||
|UniProt=Q6DN90 | |||
|association_with_transcript=-14bp_to_ENST00000273221_5end | |||
|description=CAGE_peak_1_at_IQSEC1_5end | |||
|id=chr3:13009182..13009236,- | |||
|ontology_enrichment_celltype=CL:0000057!1.87e-08!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.78e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.68e-12!659;UBERON:0003102!4.90e-10!95;UBERON:0000475!1.56e-08!365;UBERON:0007023!2.26e-08!115;UBERON:0000467!1.13e-07!625;UBERON:0000480!2.00e-07!626;UBERON:0009569!2.78e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@IQSEC1 | |||
}} |
Revision as of 21:31, 12 September 2013
Short description: | p1@IQSEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IQSEC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000273221_5end |
EntrezGene: | IQSEC1 |
HGNC: | 29112 |
UniProt: | Q6DN90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.78e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.32e-09 | 99 |
adult organism | 2.02e-08 | 114 |
subdivision of trunk | 2.55e-07 | 112 |
endoderm-derived structure | 5.04e-07 | 160 |
endoderm | 5.04e-07 | 160 |
presumptive endoderm | 5.04e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.