FFCP PHASE1:Hg19::chr3:115528930..115528940,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4045|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=6705|TSSclassifier=N|UniProt=|association_with_transcript=-471bp_to_AK094535_5end|coexpression_cluster_id=C16|description=CAGE_peak_15_at_LSAMP_5end|id=chr3:115528930..115528940,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;5.96e-34;2!UBERON:0006215;3.66e-23;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.77e-50!57;UBERON:0005068!2.77e-50!57;UBERON:0006241!2.77e-50!57;UBERON:0007135!2.77e-50!57;UBERON:0002346!2.91e-45!90;UBERON:0002616!4.55e-45!59;UBERON:0001893!8.76e-44!34;UBERON:0002020!9.11e-44!34;UBERON:0003528!9.11e-44!34;UBERON:0003075!5.46e-43!86;UBERON:0007284!5.46e-43!86;UBERON:0002780!1.34e-41!41;UBERON:0001890!1.34e-41!41;UBERON:0006240!1.34e-41!41;UBERON:0002791!1.78e-41!33;UBERON:0003080!1.90e-40!42;UBERON:0001017!1.97e-40!82;UBERON:0001869!2.01e-39!32;UBERON:0000955!3.61e-39!69;UBERON:0006238!3.61e-39!69;UBERON:0005743!4.28e-38!86;UBERON:0000073!1.64e-35!94;UBERON:0001016!1.64e-35!94;UBERON:0003056!1.03e-34!61;UBERON:0002619!1.04e-31!22;UBERON:0001950!5.57e-31!20;UBERON:0000956!1.69e-27!25;UBERON:0000203!1.69e-27!25;UBERON:0000033!1.42e-26!123;UBERON:0000153!7.53e-25!129;UBERON:0007811!7.53e-25!129;UBERON:0007023!1.46e-24!115;UBERON:0000924!7.77e-24!173;UBERON:0006601!7.77e-24!173;UBERON:0004121!4.41e-22!169;UBERON:0002308!2.10e-18!9;UBERON:0000125!2.10e-18!9;UBERON:0002420!2.25e-14!9;UBERON:0007245!2.25e-14!9;UBERON:0010009!2.25e-14!9;UBERON:0010011!2.25e-14!9;UBERON:0000454!2.25e-14!9;UBERON:0001872!3.46e-14!5;UBERON:0000064!8.13e-14!219;UBERON:0009663!1.10e-13!7;UBERON:0000025!2.48e-13!194;UBERON:0001871!6.89e-13!7;UBERON:0000200!5.55e-12!6;UBERON:0000369!1.27e-11!4;UBERON:0002435!1.27e-11!4;UBERON:0000204!1.27e-11!4;UBERON:0010082!1.27e-11!4;UBERON:0002298!1.41e-11!8;UBERON:0003076!7.34e-11!15;UBERON:0003057!7.34e-11!15;UBERON:0004733!1.46e-10!12;UBERON:0002028!1.46e-10!12;UBERON:0007277!1.46e-10!12;UBERON:0004111!4.29e-10!241;UBERON:0000477!5.20e-10!286;UBERON:0002771!8.40e-10!3;UBERON:0005383!1.12e-09!3;UBERON:0005382!1.12e-09!3;UBERON:0004732!1.16e-09!13;UBERON:0000988!3.54e-09!3;UBERON:0000483!4.77e-09!309;UBERON:0000119!7.50e-09!312;UBERON:0006331!9.44e-09!3;UBERON:0000475!1.47e-08!365;UBERON:0002680!5.73e-08!9;UBERON:0001895!5.73e-08!9;UBERON:0010092!5.73e-08!9;UBERON:0001873!4.08e-07!2;UBERON:0010122!4.08e-07!2;UBERON:0000481!9.80e-07!347|ontology_enrichment_uberon_v019=UBERON:0002771;3.61e-34;2!UBERON:0001873;5.96e-34;2!UBERON:0005383;3.66e-23;3!UBERON:0005382;3.66e-23;3!UBERON:0000369;9.45e-18;4!UBERON:0002435;9.45e-18;4!UBERON:0000204;9.45e-18;4!UBERON:0000200;2.19e-12;6!UBERON:0002037;2.59e-12;6!UBERON:0001871;8.16e-11;6!UBERON:0009663;9.43e-11;7!UBERON:0000955;3.79e-10;68!UBERON:0001893;6.09e-10;34!UBERON:0003528;2.74e-09;34!UBERON:0002791;2.74e-09;32!UBERON:0002020;2.74e-09;34!UBERON:0001869;2.74e-09;32!UBERON:0002680;1.16e-08;9!UBERON:0002420;1.16e-08;9!UBERON:0000125;1.16e-08;9!UBERON:0007245;1.16e-08;9!UBERON:0002308;1.16e-08;9!UBERON:0010009;1.16e-08;9!UBERON:0001895;1.16e-08;9!UBERON:0010011;1.16e-08;9!UBERON:0000454;1.16e-08;9!UBERON:0000073;1.64e-07;53!UBERON:0002616;1.64e-07;53!UBERON:0004733;8.14e-07;12!UBERON:0002028;8.14e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.61e-34,2;UBERON:0001873,5.04e-34,2;UBERON:0010122,5.04e-34,2;UBERON:0005383,3.27e-23,3;UBERON:0005382,3.27e-23,3;UBERON:0000369,8.69e-18,4;UBERON:0002435,8.69e-18,4;UBERON:0000204,8.69e-18,4;UBERON:0010082,8.69e-18,4;UBERON:0000200,2.19e-12,6;UBERON:0002037,2.74e-12,6;UBERON:0006215,2.74e-12,6;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0001871,8.16e-11,6;UBERON:0009663,8.99e-11,7;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002791,3.79e-09,32;UBERON:0001869,3.79e-09,32;UBERON:0003528,1.09e-08,34;UBERON:0002020,1.09e-08,34;UBERON:0001893,1.09e-08,34;UBERON:0002420,1.12e-08,9;UBERON:0000125,1.12e-08,9;UBERON:0007245,1.12e-08,9;UBERON:0002308,1.12e-08,9;UBERON:0010009,1.12e-08,9;UBERON:0010011,1.12e-08,9;UBERON:0000454,1.12e-08,9;UBERON:0002680,1.21e-08,9;UBERON:0001895,1.21e-08,9;UBERON:0010092,1.21e-08,9;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41;UBERON:0004733,8.38e-07,12;UBERON:0002028,8.38e-07,12;UBERON:0007277,8.38e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6705 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-471bp_to_AK094535_5end | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_15_at_LSAMP_5end | |||
|id=chr3:115528930..115528940,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.96e-34;2!UBERON:0006215;3.66e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002771;3.61e-34;2!UBERON:0001873;5.96e-34;2!UBERON:0005383;3.66e-23;3!UBERON:0005382;3.66e-23;3!UBERON:0000369;9.45e-18;4!UBERON:0002435;9.45e-18;4!UBERON:0000204;9.45e-18;4!UBERON:0000200;2.19e-12;6!UBERON:0002037;2.59e-12;6!UBERON:0001871;8.16e-11;6!UBERON:0009663;9.43e-11;7!UBERON:0000955;3.79e-10;68!UBERON:0001893;6.09e-10;34!UBERON:0003528;2.74e-09;34!UBERON:0002791;2.74e-09;32!UBERON:0002020;2.74e-09;34!UBERON:0001869;2.74e-09;32!UBERON:0002680;1.16e-08;9!UBERON:0002420;1.16e-08;9!UBERON:0000125;1.16e-08;9!UBERON:0007245;1.16e-08;9!UBERON:0002308;1.16e-08;9!UBERON:0010009;1.16e-08;9!UBERON:0001895;1.16e-08;9!UBERON:0010011;1.16e-08;9!UBERON:0000454;1.16e-08;9!UBERON:0000073;1.64e-07;53!UBERON:0002616;1.64e-07;53!UBERON:0004733;8.14e-07;12!UBERON:0002028;8.14e-07;12 | |||
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|short_description=p15@LSAMP | |||
}} |
Revision as of 20:56, 12 September 2013
Short description: | p15@LSAMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_LSAMP_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -471bp_to_AK094535_5end |
EntrezGene: | LSAMP |
HGNC: | 6705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.