FFCP PHASE1:Hg19::chr3:170151051..170151075,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5010|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=8514|TSSclassifier=W|UniProt=|association_with_transcript=-109bp_to_AJ245902_5end|coexpression_cluster_id=C635|description=CAGE_peak_10_at_CLDN11_5end|id=chr3:170151051..170151075,+|ontology_enrichment_celltype=CL:0000222!3.84e-12!119;CL:0000055!1.31e-11!180;CL:0000057!6.54e-11!75;CL:0000183!3.63e-09!59;CL:0000187!4.97e-08!54;CL:0000680!6.90e-08!57;CL:0000056!6.90e-08!57;CL:0000355!6.90e-08!57|ontology_enrichment_celltype_v019=CL:0002622;3.67e-09;3!CL:0002602;6.25e-07;2|ontology_enrichment_celltype_v019_2=CL:0002622,1.72e-09,3;CL:0002602,5.48e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000119!1.24e-12!312;UBERON:0000483!8.95e-12!309;UBERON:0003075!2.54e-09!86;UBERON:0007284!2.54e-09!86;UBERON:0000477!3.00e-09!286;UBERON:0000914!3.44e-09!83;UBERON:0002329!3.44e-09!83;UBERON:0003077!3.44e-09!83;UBERON:0003059!3.44e-09!83;UBERON:0007282!3.44e-09!83;UBERON:0009618!3.44e-09!83;UBERON:0007285!3.44e-09!83;UBERON:0004290!2.05e-08!70;UBERON:0000475!2.14e-08!365;UBERON:0002346!2.27e-08!90;UBERON:0001049!2.78e-08!57;UBERON:0005068!2.78e-08!57;UBERON:0006241!2.78e-08!57;UBERON:0007135!2.78e-08!57;UBERON:0002049!3.33e-08!79;UBERON:0007798!3.33e-08!79;UBERON:0002616!3.36e-08!59;UBERON:0000486!6.09e-08!82;UBERON:0004111!2.45e-07!241;UBERON:0001134!2.64e-07!61;UBERON:0002036!2.64e-07!61;UBERON:0003082!2.64e-07!61;UBERON:0002385!8.46e-07!63;UBERON:0001015!8.46e-07!63;UBERON:0000383!8.46e-07!63;UBERON:0004535!9.66e-07!110|ontology_enrichment_uberon_v019=UBERON:0011135;5.21e-09;5!UBERON:0002216;5.21e-09;5!UBERON:0011134;5.21e-09;5!UBERON:0002209;5.21e-09;5!UBERON:0002213;5.21e-09;5!UBERON:0007844;5.21e-09;5!UBERON:0011138;5.21e-09;5!UBERON:0001130;5.21e-09;5!UBERON:0001066;5.21e-09;5!UBERON:0001468;5.21e-09;5!UBERON:0000125;5.10e-07;9!UBERON:0002308;5.10e-07;9!UBERON:0006444;6.25e-07;2!UBERON:0001995;6.25e-07;2!UBERON:0004715;6.25e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0011135,6.37e-09,5;UBERON:0002216,6.37e-09,5;UBERON:0011134,6.37e-09,5;UBERON:0002209,6.37e-09,5;UBERON:0002213,6.37e-09,5;UBERON:0005856,6.37e-09,5;UBERON:0005866,6.37e-09,5;UBERON:0005863,6.37e-09,5;UBERON:0007844,6.37e-09,5;UBERON:0011138,6.37e-09,5;UBERON:0001130,6.37e-09,5;UBERON:0001066,6.37e-09,5;UBERON:0001468,6.37e-09,5;UBERON:0006444,5.48e-07,2;UBERON:0001995,5.48e-07,2;UBERON:0004715,5.48e-07,2;UBERON:0000125,7.70e-07,9;UBERON:0002308,7.70e-07,9|phase1_expression=0.181678379270557,0,0,0,0,0,0,1.89515962028049,0,0.245733936501509,0,0,0,2.72285976512103,3.31397375727916,0.672325146451775,1.80808358407193,0,0,0,1.42800483870977,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.511450247374121,0.722878304769133,0,0,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10100111003195,1.06729878806013,0,1.20848795132744,0,0.24406205754817,1.47065232138347,0,0.803697554556718,0.673588117878509,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.759783069987479,0.529636723252875,0.860509862246441,1.06400514659507,0,0,0,0.622422070799533,0.134710672069688,0.326923806226917,1.66493170409425,1.15235184896,0,0,0,2.24173020827702,0.704606991862589,0.647491777472526,0.140450806702248,0,0.737005903870608,0.206651562351531,0,0,1.82032272387605,2.15585442544872,1.0100166837244,0.500474079487857,0,0,0,0.150238058906597,0.340296549480063,0,0,0.847727604638247,0,0.309157587715317,0,0.558350568994769,0.506328996723799,0.292311015483596,0,0.276149695926898,0.484938170456436,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0.977424915930974,2.07986957055916,0,0,0.234817388471643,0.288732895522148,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.36669142910475,0.646358578788889,0,0.845302752556,0.26593811658487,0,0.771622122786426,0,0,0.857867961948885,0,0,0,0.710783897485092,0,0.904318131178758,0,0.699810938274399,0,0,0,0,0,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71768088406796,1.00034104211935,0.813795071099207,2.28767947683888,2.67643483195743,0.157702415033935,2.22568688486155,0,0,1.03473071292505,0,0,0.173767228936166,1.95801157462741,2.40200396667599,0,0,0,0,1.66435439510497,0,0,0,0,0.384417447767103,0,0.64341568457443,0,3.85524234506639,1.59805552781814,2.7101961484557,0.519254429183621,6.2753604368378,0,0,0,1.83703117063371,2.91345868810747,6.81846957789005,0,0,0,0,0,0,1.36074964221213,0.863663664408557,0,0,0,0.254876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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5010 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8514 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-109bp_to_AJ245902_5end | |||
|coexpression_cluster_id=C635 | |||
|description=CAGE_peak_10_at_CLDN11_5end | |||
|id=chr3:170151051..170151075,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.84e-12!119;CL:0000055!1.31e-11!180;CL:0000057!6.54e-11!75;CL:0000183!3.63e-09!59;CL:0000187!4.97e-08!54;CL:0000680!6.90e-08!57;CL:0000056!6.90e-08!57;CL:0000355!6.90e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0002622;3.67e-09;3!CL:0002602;6.25e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.72e-09,3;CL:0002602,5.48e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.24e-12!312;UBERON:0000483!8.95e-12!309;UBERON:0003075!2.54e-09!86;UBERON:0007284!2.54e-09!86;UBERON:0000477!3.00e-09!286;UBERON:0000914!3.44e-09!83;UBERON:0002329!3.44e-09!83;UBERON:0003077!3.44e-09!83;UBERON:0003059!3.44e-09!83;UBERON:0007282!3.44e-09!83;UBERON:0009618!3.44e-09!83;UBERON:0007285!3.44e-09!83;UBERON:0004290!2.05e-08!70;UBERON:0000475!2.14e-08!365;UBERON:0002346!2.27e-08!90;UBERON:0001049!2.78e-08!57;UBERON:0005068!2.78e-08!57;UBERON:0006241!2.78e-08!57;UBERON:0007135!2.78e-08!57;UBERON:0002049!3.33e-08!79;UBERON:0007798!3.33e-08!79;UBERON:0002616!3.36e-08!59;UBERON:0000486!6.09e-08!82;UBERON:0004111!2.45e-07!241;UBERON:0001134!2.64e-07!61;UBERON:0002036!2.64e-07!61;UBERON:0003082!2.64e-07!61;UBERON:0002385!8.46e-07!63;UBERON:0001015!8.46e-07!63;UBERON:0000383!8.46e-07!63;UBERON:0004535!9.66e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;5.21e-09;5!UBERON:0002216;5.21e-09;5!UBERON:0011134;5.21e-09;5!UBERON:0002209;5.21e-09;5!UBERON:0002213;5.21e-09;5!UBERON:0007844;5.21e-09;5!UBERON:0011138;5.21e-09;5!UBERON:0001130;5.21e-09;5!UBERON:0001066;5.21e-09;5!UBERON:0001468;5.21e-09;5!UBERON:0000125;5.10e-07;9!UBERON:0002308;5.10e-07;9!UBERON:0006444;6.25e-07;2!UBERON:0001995;6.25e-07;2!UBERON:0004715;6.25e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,6.37e-09,5;UBERON:0002216,6.37e-09,5;UBERON:0011134,6.37e-09,5;UBERON:0002209,6.37e-09,5;UBERON:0002213,6.37e-09,5;UBERON:0005856,6.37e-09,5;UBERON:0005866,6.37e-09,5;UBERON:0005863,6.37e-09,5;UBERON:0007844,6.37e-09,5;UBERON:0011138,6.37e-09,5;UBERON:0001130,6.37e-09,5;UBERON:0001066,6.37e-09,5;UBERON:0001468,6.37e-09,5;UBERON:0006444,5.48e-07,2;UBERON:0001995,5.48e-07,2;UBERON:0004715,5.48e-07,2;UBERON:0000125,7.70e-07,9;UBERON:0002308,7.70e-07,9 | |||
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| |||
|short_description=p10@CLDN11 | |||
}} |
Revision as of 22:41, 12 September 2013
Short description: | p10@CLDN11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_CLDN11_5end |
Coexpression cluster: | C635_Fibroblast_Pericytes_Nucleus_Preadipocyte_Smooth_mesothelioma_Prostate |
Association with transcript: | -109bp_to_AJ245902_5end |
EntrezGene: | CLDN11 |
HGNC: | 8514 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.72e-09 | 3 |
annulus pulposus cell | 5.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 6.37e-09 | 5 |
symphysis | 6.37e-09 | 5 |
nonsynovial joint | 6.37e-09 | 5 |
fibrous joint | 6.37e-09 | 5 |
cartilaginous joint | 6.37e-09 | 5 |
developing mesenchymal condensation | 6.37e-09 | 5 |
pre-cartilage condensation | 6.37e-09 | 5 |
cartilaginous condensation | 6.37e-09 | 5 |
cartilage element | 6.37e-09 | 5 |
post-cranial axial skeletal system | 6.37e-09 | 5 |
vertebral column | 6.37e-09 | 5 |
intervertebral disk | 6.37e-09 | 5 |
intervertebral joint | 6.37e-09 | 5 |
annulus fibrosus | 5.48e-07 | 2 |
fibrocartilage | 5.48e-07 | 2 |
annulus fibrosus disci intervertebralis | 5.48e-07 | 2 |
neural nucleus | 7.70e-07 | 9 |
nucleus of brain | 7.70e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.