FFCP PHASE1:Hg19::chr5:132299572..132299623,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27125|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17869|TSSclassifier=W|UniProt=Q9UHB7|association_with_transcript=-218bp_to_NM_014423,uc003kyd.2,uc003kye.1,uc003kyf.3,uc011cxk.1_5end|description=CAGE_peak_6_at_AFF4_5end|id=chr5:132299572..132299623,-|ontology_enrichment_celltype=CL:0000860!1.90e-13!45;CL:0002057!1.27e-12!42|ontology_enrichment_celltype_v019=CL:0000860;1.36e-16;33!CL:0002057;1.36e-16;33!CL:0000473;4.78e-10;39!CL:0000234;4.78e-10;39!CL:0000576;5.64e-07;48|ontology_enrichment_celltype_v019_2=CL:0000860,1.11e-14,42;CL:0002057,1.11e-14,42;CL:0000473,4.76e-11,48;CL:0000234,4.76e-11,48;CL:0002087,4.68e-09,115;CL:0000738,4.97e-09,136;CL:0000766,4.80e-08,72;CL:0002031,9.05e-08,120;CL:0002009,4.84e-07,61;CL:0002194,7.10e-07,59;CL:0000576,7.10e-07,59;CL:0000040,7.10e-07,59;CL:0000559,7.10e-07,59|ontology_enrichment_development_v019=CL:0002057;2.98e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.61e-11!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.82e-10,114;UBERON:0000073,2.49e-07,53;UBERON:0002616,2.49e-07,53;UBERON:0001049,3.26e-07,56;UBERON:0005068,3.26e-07,56;UBERON:0006241,3.26e-07,56;UBERON:0007135,3.26e-07,56|phase1_expression=0.54503513781167,1.49870366723688,1.83240725324762,2.00146596706261,0.893922188854576,0,0,0.631719873426831,1.04474251279935,0.245733936501509,0,0.436882744260345,0.527533956456907,0.123766352960047,0.331397375727916,2.01697543935533,0.602694528023977,0,0.975865597581014,0.984968464614303,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0.61130724598361,0.0821005894499457,0.236132343941038,2.75354993794233,0.767658796194425,1.85779347979291,0,1.8072355126695,0.739508020333575,0.0774672005803016,0.142169232487422,0,0,1.40381113229099,1.95309783644267,0.223915474239924,0.32389366601898,0,1.74477886535478,3.02300754951048,1.94067248950253,3.71886459049095,5.34518254428373,3.40677007984614,2.01384674625505,5.12321413058201,2.36482229888585,5.5159308917859,6.45484683583826,6.77132432971709,2.82363509313907,5.73102915121476,2.47195832889593,2.14258724659632,5.1348644332175,7.67204550958849,1.64925650093358,3.78980949481101,2.55734850319616,4.64334781805734,3.97169657283798,11.2108004819203,3.76872997885115,5.73631210262222,4.12658804939722,4.23779651843358,5.89244217580104,3.79754864929061,0.422510572623884,0.637812899895131,0.419317291016752,0.44931452458598,0.450530678524519,0.48217676009124,1.14005097496499,1.19350006319454,0.730656615058536,1.75996244461323,1.09227722252426,0.889509253863555,1.70692089026603,1.20118796110804,1.72425731986345,1.98313461835459,0,7.96898156753228,2.34894875748376,6.88091810625412,0,0.560508562981536,0.263384084775077,4.32761494250433,3.53709686474248,5.75684197198626,0.668745981562712,2.28145586643513,1.4203434172042,11.6896037044747,0.445641827540694,1.76763544484902,1.10766947291811,2.16643091012012,0.512365278902701,1.8208308658383,0.493313713811028,1.10540007114339,0.289803085735052,2.37258501059297,0.802622484269139,1.04535523804977,0.453237370790265,3.44898444241729,1.03088233644789,1.26509846009751,1.27426165729639,0.651083453856419,3.8018081777935,1.50575119077773,1.02389288923535,0,1.18388626022008,1.64225599384209,6.65302252641617,5.34880391567015,4.48955652036677,2.43806866313962,0,0,0.722878304769133,1.00267582127178,1.01392563272577,0.795285947051099,3.89307896242109,0.378139268656271,1.33037638477538,1.49319135678314,5.30465255765736,1.09288586487763,0,0.324547393654683,0.174129737299267,0.132957960518865,0.953962497221368,0.571994910780128,0.74291500265913,0.198762407366705,0.860234595106124,0,0,0,0,0.417989933073621,0.516833518338658,0,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0,0.81014194788176,0.357198913136319,0.22452937262617,0.112611480483322,3.06633274931766,0.949265659568129,0.366403487860815,2.63560834872127,3.87780264148325,0.436094052142534,1.49091585508596,0.759783069987479,3.04541115870403,1.72101972449288,2.12801029319014,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0.756787138224657,0.576175924479999,0,0.936480230490962,0,0.747243402759005,0.469737994575059,0.161872944368132,0.140450806702248,0.408308342509787,0.245668634623536,1.03325781175765,0,2.96720315134268,1.82032272387605,1.43723628363248,0,0.125118519871964,0.554128230968366,1.31693286264251,0.919463387397059,2.25357088359895,0.340296549480063,1.61450672119976,0.640672166455702,0.423863802319124,0.900273288253207,0.618315175430633,1.28820270022815,1.11670113798954,0.675105328965065,0.584622030967192,1.00973509697646,1.19664868234989,0.969876340912871,0,0.503760491138201,0.67824236924195,1.54608682530637,1.09098448236334,2.29443676311203,0.365921118388786,0.530119073285941,0.232387885739037,0.10366105501537,0,0,1.56449532329816,0,2.76269842704961,0.4643679280319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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27125 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17869 | |||
|TSSclassifier=W | |||
|UniProt=Q9UHB7 | |||
|association_with_transcript=-218bp_to_NM_014423,uc003kyd.2,uc003kye.1,uc003kyf.3,uc011cxk.1_5end | |||
|description=CAGE_peak_6_at_AFF4_5end | |||
|id=chr5:132299572..132299623,- | |||
|ontology_enrichment_celltype=CL:0000860!1.90e-13!45;CL:0002057!1.27e-12!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-16;33!CL:0002057;1.36e-16;33!CL:0000473;4.78e-10;39!CL:0000234;4.78e-10;39!CL:0000576;5.64e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.11e-14,42;CL:0002057,1.11e-14,42;CL:0000473,4.76e-11,48;CL:0000234,4.76e-11,48;CL:0002087,4.68e-09,115;CL:0000738,4.97e-09,136;CL:0000766,4.80e-08,72;CL:0002031,9.05e-08,120;CL:0002009,4.84e-07,61;CL:0002194,7.10e-07,59;CL:0000576,7.10e-07,59;CL:0000040,7.10e-07,59;CL:0000559,7.10e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.98e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.61e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.82e-10,114;UBERON:0000073,2.49e-07,53;UBERON:0002616,2.49e-07,53;UBERON:0001049,3.26e-07,56;UBERON:0005068,3.26e-07,56;UBERON:0006241,3.26e-07,56;UBERON:0007135,3.26e-07,56 | |||
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| |||
|short_description=p6@AFF4 | |||
}} |
Revision as of 13:09, 13 September 2013
Short description: | p6@AFF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_AFF4_5end |
Coexpression cluster: | NA |
Association with transcript: | -218bp_to_NM_014423, uc003kyd.2, uc003kye.1, uc003kyf.3, uc011cxk.1_5end |
EntrezGene: | AFF4 |
HGNC: | 17869 |
UniProt: | Q9UHB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.11e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.11e-14 | 42 |
defensive cell | 4.76e-11 | 48 |
phagocyte | 4.76e-11 | 48 |
nongranular leukocyte | 4.68e-09 | 115 |
leukocyte | 4.97e-09 | 136 |
myeloid leukocyte | 4.80e-08 | 72 |
hematopoietic lineage restricted progenitor cell | 9.05e-08 | 120 |
macrophage dendritic cell progenitor | 4.84e-07 | 61 |
monopoietic cell | 7.10e-07 | 59 |
monocyte | 7.10e-07 | 59 |
monoblast | 7.10e-07 | 59 |
promonocyte | 7.10e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.82e-10 | 114 |
regional part of nervous system | 2.49e-07 | 53 |
regional part of brain | 2.49e-07 | 53 |
neural tube | 3.26e-07 | 56 |
neural rod | 3.26e-07 | 56 |
future spinal cord | 3.26e-07 | 56 |
neural keel | 3.26e-07 | 56 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.