FFCP PHASE1:Hg19::chr6:36304660..36304666,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=389384|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=33769|TSSclassifier=N|UniProt=P0C671|association_with_transcript=0bp_to_ENST00000437635,NM_001010903,uc003oly.2_5end|coexpression_cluster_id=C25|description=CAGE_peak_1_at_C6orf222_5end|id=chr6:36304660..36304666,-|ontology_enrichment_celltype=CL:0001014!4.27e-08!2;CL:0001016!4.27e-08!2|ontology_enrichment_celltype_v019=CL:0002563;1.61e-12;4!CL:0000771;3.81e-07;2!CL:0002253;4.98e-07;2|ontology_enrichment_celltype_v019_2=CL:0002563,1.86e-12,4;CL:0000771,3.70e-07,2;CL:0002253,5.28e-07,2|ontology_enrichment_development_v019=UBERON:0006242;8.64e-13;1!UBERON:0003104;2.47e-09;31|ontology_enrichment_disease=DOID:3493!4.27e-08!2;DOID:299!9.28e-08!25;DOID:4468!1.03e-07!2|ontology_enrichment_disease_v019=DOID:3119;4.32e-08;14!DOID:4929;3.81e-07;2|ontology_enrichment_disease_v019_2=DOID:3119,4.27e-08,14;DOID:4929,3.48e-07,2|ontology_enrichment_uberon=UBERON:0005409!1.06e-22!35;UBERON:0000160!4.25e-17!27;UBERON:0002294!1.95e-12!7;UBERON:0001173!1.95e-12!7;UBERON:0004912!1.95e-12!7;UBERON:0004907!2.88e-12!5;UBERON:0000059!6.46e-12!11;UBERON:0001007!3.70e-09!155;UBERON:0001555!3.70e-09!155;UBERON:0007026!3.70e-09!155;UBERON:0001052!3.86e-09!4;UBERON:0004921!5.09e-09!129;UBERON:0004185!5.09e-09!129;UBERON:0002394!2.15e-08!4;UBERON:0003928!2.15e-08!4;UBERON:0004119!6.56e-08!169;UBERON:0000925!6.56e-08!169;UBERON:0006595!6.56e-08!169;UBERON:0004177!6.95e-08!7;UBERON:0000945!4.20e-07!8;UBERON:0010039!4.20e-07!8;UBERON:0001155!6.73e-07!9|ontology_enrichment_uberon_v019=UBERON:0000160;5.92e-52;17!UBERON:0005409;8.70e-50;22!UBERON:0002108;2.64e-38;4!UBERON:0004921;2.29e-30;33!UBERON:0000059;1.85e-17;11!UBERON:0002114;1.22e-16;2!UBERON:0004913;5.07e-13;1!UBERON:0003703;5.07e-13;1!UBERON:0001174;5.07e-13;1!UBERON:0004914;5.07e-13;1!UBERON:0001052;1.16e-12;4!UBERON:0001242;1.61e-12;4!UBERON:0001262;1.61e-12;4!UBERON:0004786;1.61e-12;4!UBERON:0004808;1.61e-12;4!UBERON:0001277;1.61e-12;4!UBERON:0001155;2.14e-12;9!UBERON:0001555;2.63e-11;54!UBERON:0004907;2.59e-10;5!UBERON:0001007;1.60e-08;81!UBERON:0000485;1.55e-07;7!UBERON:0003929;1.55e-07;7!UBERON:0002294;1.55e-07;7!UBERON:0001173;1.55e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.29e-52,17;UBERON:0005409,6.09e-44,25;UBERON:0002108,2.29e-38,4;UBERON:0000059,1.93e-17,11;UBERON:0002114,1.08e-16,2;UBERON:0004913,4.23e-13,1;UBERON:0003703,4.23e-13,1;UBERON:0001174,4.23e-13,1;UBERON:0004914,4.23e-13,1;UBERON:0001052,1.23e-12,4;UBERON:0001242,1.86e-12,4;UBERON:0001262,1.86e-12,4;UBERON:0004786,1.86e-12,4;UBERON:0004808,1.86e-12,4;UBERON:0001277,1.86e-12,4;UBERON:0001155,2.23e-12,9;UBERON:0004921,1.45e-10,118;UBERON:0004907,2.71e-10,5;UBERON:0001007,5.26e-10,145;UBERON:0001555,5.26e-10,145;UBERON:0007026,5.26e-10,145;UBERON:0004119,6.45e-09,160;UBERON:0000925,6.45e-09,160;UBERON:0006595,6.45e-09,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0.383829398097213,0,0,0,0,0.46480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33678033231916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0.73886140225013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,1.23084805461069,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,1.13082457147153,0,0,13.9762951915276,21.3860550726769,0,0,0,0,0,0,0.182454789215666,0,0,0,2.41981432097328,0,0,1.20258735531594,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.240476460754601,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,16.3094329338435,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=389384 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33769 | |||
|TSSclassifier=N | |||
|UniProt=P0C671 | |||
|association_with_transcript=0bp_to_ENST00000437635,NM_001010903,uc003oly.2_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_C6orf222_5end | |||
|id=chr6:36304660..36304666,- | |||
|ontology_enrichment_celltype=CL:0001014!4.27e-08!2;CL:0001016!4.27e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.61e-12;4!CL:0000771;3.81e-07;2!CL:0002253;4.98e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.86e-12,4;CL:0000771,3.70e-07,2;CL:0002253,5.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;8.64e-13;1!UBERON:0003104;2.47e-09;31 | |||
|ontology_enrichment_disease=DOID:3493!4.27e-08!2;DOID:299!9.28e-08!25;DOID:4468!1.03e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3119;4.32e-08;14!DOID:4929;3.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.27e-08,14;DOID:4929,3.48e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.06e-22!35;UBERON:0000160!4.25e-17!27;UBERON:0002294!1.95e-12!7;UBERON:0001173!1.95e-12!7;UBERON:0004912!1.95e-12!7;UBERON:0004907!2.88e-12!5;UBERON:0000059!6.46e-12!11;UBERON:0001007!3.70e-09!155;UBERON:0001555!3.70e-09!155;UBERON:0007026!3.70e-09!155;UBERON:0001052!3.86e-09!4;UBERON:0004921!5.09e-09!129;UBERON:0004185!5.09e-09!129;UBERON:0002394!2.15e-08!4;UBERON:0003928!2.15e-08!4;UBERON:0004119!6.56e-08!169;UBERON:0000925!6.56e-08!169;UBERON:0006595!6.56e-08!169;UBERON:0004177!6.95e-08!7;UBERON:0000945!4.20e-07!8;UBERON:0010039!4.20e-07!8;UBERON:0001155!6.73e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.92e-52;17!UBERON:0005409;8.70e-50;22!UBERON:0002108;2.64e-38;4!UBERON:0004921;2.29e-30;33!UBERON:0000059;1.85e-17;11!UBERON:0002114;1.22e-16;2!UBERON:0004913;5.07e-13;1!UBERON:0003703;5.07e-13;1!UBERON:0001174;5.07e-13;1!UBERON:0004914;5.07e-13;1!UBERON:0001052;1.16e-12;4!UBERON:0001242;1.61e-12;4!UBERON:0001262;1.61e-12;4!UBERON:0004786;1.61e-12;4!UBERON:0004808;1.61e-12;4!UBERON:0001277;1.61e-12;4!UBERON:0001155;2.14e-12;9!UBERON:0001555;2.63e-11;54!UBERON:0004907;2.59e-10;5!UBERON:0001007;1.60e-08;81!UBERON:0000485;1.55e-07;7!UBERON:0003929;1.55e-07;7!UBERON:0002294;1.55e-07;7!UBERON:0001173;1.55e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.29e-52,17;UBERON:0005409,6.09e-44,25;UBERON:0002108,2.29e-38,4;UBERON:0000059,1.93e-17,11;UBERON:0002114,1.08e-16,2;UBERON:0004913,4.23e-13,1;UBERON:0003703,4.23e-13,1;UBERON:0001174,4.23e-13,1;UBERON:0004914,4.23e-13,1;UBERON:0001052,1.23e-12,4;UBERON:0001242,1.86e-12,4;UBERON:0001262,1.86e-12,4;UBERON:0004786,1.86e-12,4;UBERON:0004808,1.86e-12,4;UBERON:0001277,1.86e-12,4;UBERON:0001155,2.23e-12,9;UBERON:0004921,1.45e-10,118;UBERON:0004907,2.71e-10,5;UBERON:0001007,5.26e-10,145;UBERON:0001555,5.26e-10,145;UBERON:0007026,5.26e-10,145;UBERON:0004119,6.45e-09,160;UBERON:0000925,6.45e-09,160;UBERON:0006595,6.45e-09,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0.383829398097213,0,0,0,0,0.46480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33678033231916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0.73886140225013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,1.23084805461069,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,1.13082457147153,0,0,13.9762951915276,21.3860550726769,0,0,0,0,0,0,0.182454789215666,0,0,0,2.41981432097328,0,0,1.20258735531594,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.240476460754601,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,16.3094329338435,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,3.12605604493237,0,0,2.95712172434091,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,14.574152492317,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.196300467230486,0.853425474875886,0,0,0,0.485710993059139,0,0,0,0,0,0,43.9892701215285,32.3468149545857,0,0,0,0,0,0,0,0,0.0644578879735772,0.399764623699716,0,0,0,1.46067277649303,0,0,0,0.0679914901909147,0,5.81929524566941,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.129177819672012,0.31037357147929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@C6orf222 | |||
}} |
Revision as of 20:44, 13 September 2013
Short description: | p1@C6orf222 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C6orf222_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000437635, NM_001010903, uc003oly.2_5end |
EntrezGene: | C6orf222 |
HGNC: | 33769 |
UniProt: | P0C671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.86e-12 | 4 |
eosinophil | 3.70e-07 | 2 |
epithelial cell of large intestine | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.29e-52 | 17 |
gastrointestinal system | 6.09e-44 | 25 |
small intestine | 2.29e-38 | 4 |
large intestine | 1.93e-17 | 11 |
duodenum | 1.08e-16 | 2 |
hepatopancreatic ampulla | 4.23e-13 | 1 |
extrahepatic bile duct | 4.23e-13 | 1 |
common bile duct | 4.23e-13 | 1 |
duodenal papilla | 4.23e-13 | 1 |
rectum | 1.23e-12 | 4 |
intestinal mucosa | 1.86e-12 | 4 |
wall of intestine | 1.86e-12 | 4 |
gastrointestinal system mucosa | 1.86e-12 | 4 |
gastrointestinal system epithelium | 1.86e-12 | 4 |
intestinal epithelium | 1.86e-12 | 4 |
colon | 2.23e-12 | 9 |
subdivision of digestive tract | 1.45e-10 | 118 |
lower digestive tract | 2.71e-10 | 5 |
digestive system | 5.26e-10 | 145 |
digestive tract | 5.26e-10 | 145 |
primitive gut | 5.26e-10 | 145 |
endoderm-derived structure | 6.45e-09 | 160 |
endoderm | 6.45e-09 | 160 |
presumptive endoderm | 6.45e-09 | 160 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.27e-08 | 14 |
tubular adenocarcinoma | 3.48e-07 | 2 |
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