FFCP PHASE1:Hg19::chr8:61429565..61429579,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9763 | |||
|TSSclassifier=S | |||
|UniProt=P61019 | |||
|association_with_transcript=6bp_to_uc003xud.1,uc011lef.1_5end | |||
|description=CAGE_peak_4_at_RAB2A_5end | |||
|id=chr8:61429565..61429579,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.08e-19!42;CL:0000860!4.97e-17!45;CL:0000048!2.16e-13!430;CL:0000766!2.82e-13!76;CL:0000723!8.18e-13!436;CL:0000034!2.07e-12!444;CL:0002009!6.87e-12!65;CL:0002194!1.35e-11!63;CL:0000576!1.35e-11!63;CL:0000040!1.35e-11!63;CL:0000559!1.35e-11!63;CL:0000557!5.36e-10!71;CL:0000134!4.77e-09!358;CL:0000839!1.88e-08!70;CL:0002320!7.38e-08!365;CL:0000136!1.03e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.63e-15;33!CL:0002057;4.63e-15;33!CL:0000576;1.52e-10;48!CL:0000473;4.60e-10;39!CL:0000234;4.60e-10;39!CL:0000136;5.23e-08;13!CL:0000766;1.28e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.08e-19,42;CL:0002057,3.08e-19,42;CL:0000473,1.53e-15,48;CL:0000234,1.53e-15,48;CL:0000766,4.69e-14,72;CL:0000048,1.64e-13,427;CL:0000723,6.30e-13,433;CL:0002009,1.05e-12,61;CL:0000034,1.61e-12,441;CL:0002194,2.05e-12,59;CL:0000576,2.05e-12,59;CL:0000040,2.05e-12,59;CL:0000559,2.05e-12,59;CL:0000557,1.26e-10,67;CL:0000134,2.50e-09,354;CL:0000839,5.43e-09,66;CL:0002320,4.11e-08,361;CL:0000136,1.03e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;2.07e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.07e-13!167;UBERON:0002371!1.40e-09!80;UBERON:0001474!5.40e-09!86;UBERON:0004765!9.40e-09!101;UBERON:0001434!9.40e-09!101;UBERON:0003081!2.24e-08!216;UBERON:0002384!3.25e-08!375;UBERON:0002405!3.58e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.00e-12,167;UBERON:0003081,1.05e-10,203;UBERON:0002371,4.05e-10,76;UBERON:0000926,1.81e-09,315;UBERON:0004120,1.81e-09,315;UBERON:0006603,1.81e-09,315;UBERON:0001474,1.83e-09,82;UBERON:0004765,1.51e-08,90;UBERON:0002384,1.80e-08,371;UBERON:0002405,2.74e-08,93;UBERON:0001434,3.63e-08,100 | |||
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| |||
|short_description=p4@RAB2A | |||
}} |
Revision as of 05:41, 14 September 2013
Short description: | p4@RAB2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RAB2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_uc003xud.1, uc011lef.1_5end |
EntrezGene: | RAB2A |
HGNC: | 9763 |
UniProt: | P61019 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.08e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.08e-19 | 42 |
defensive cell | 1.53e-15 | 48 |
phagocyte | 1.53e-15 | 48 |
myeloid leukocyte | 4.69e-14 | 72 |
multi fate stem cell | 1.64e-13 | 427 |
somatic stem cell | 6.30e-13 | 433 |
macrophage dendritic cell progenitor | 1.05e-12 | 61 |
stem cell | 1.61e-12 | 441 |
monopoietic cell | 2.05e-12 | 59 |
monocyte | 2.05e-12 | 59 |
monoblast | 2.05e-12 | 59 |
promonocyte | 2.05e-12 | 59 |
granulocyte monocyte progenitor cell | 1.26e-10 | 67 |
mesenchymal cell | 2.50e-09 | 354 |
myeloid lineage restricted progenitor cell | 5.43e-09 | 66 |
connective tissue cell | 4.11e-08 | 361 |
fat cell | 1.03e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.00e-12 | 167 |
lateral plate mesoderm | 1.05e-10 | 203 |
bone marrow | 4.05e-10 | 76 |
mesoderm | 1.81e-09 | 315 |
mesoderm-derived structure | 1.81e-09 | 315 |
presumptive mesoderm | 1.81e-09 | 315 |
bone element | 1.83e-09 | 82 |
skeletal element | 1.51e-08 | 90 |
connective tissue | 1.80e-08 | 371 |
immune system | 2.74e-08 | 93 |
skeletal system | 3.63e-08 | 100 |
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