FFCP PHASE1:Hg19::chr8:117878863..117878874,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5885|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9811|TSSclassifier=N|UniProt=|association_with_transcript=355bp_to_ENST00000519469_5end|coexpression_cluster_id=C15|description=CAGE_peak_15_at_RAD21_5end|id=chr8:117878863..117878874,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002615;8.29e-19;3!CL:0002623;1.48e-18;3!CL:0000622;1.58e-11;5!CL:0000154;9.25e-10;6!CL:0002549;6.35e-08;2!CL:0002588;6.35e-08;2!CL:0000150;8.58e-07;9|ontology_enrichment_celltype_v019_2=CL:0002615,6.06e-19,3;CL:0002623,1.94e-18,3;CL:0000622,1.85e-11,5;CL:0000154,1.06e-09,6;CL:0002549,4.38e-08,2;CL:0002588,7.03e-08,2;CL:0000150,9.37e-07,9|ontology_enrichment_development_v019=UBERON:0009143;1.50e-14;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.20e-10!115;UBERON:0001737!5.40e-09!9;UBERON:0001557!3.86e-08!19;UBERON:0002616!6.91e-08!59;UBERON:0000481!3.99e-07!347|ontology_enrichment_uberon_v019=UBERON:0005284;1.58e-11;5!UBERON:0003688;6.94e-10;6!UBERON:0002358;6.94e-10;6!UBERON:0003684;6.94e-10;6!UBERON:0001178;6.94e-10;6!UBERON:0001044;9.25e-10;6!UBERON:0003293;9.25e-10;6!UBERON:0003294;9.25e-10;6!UBERON:0010047;9.25e-10;6!UBERON:0003408;9.25e-10;6!UBERON:0000167;9.25e-10;6!UBERON:0001041;4.36e-09;14!UBERON:0001897;6.35e-08;2!UBERON:0005629;6.35e-08;2!UBERON:0005358;6.35e-08;2!UBERON:0001886;6.35e-08;2!UBERON:0004086;6.35e-08;2!UBERON:0010225;6.35e-08;2!UBERON:0005282;6.35e-08;2!UBERON:0005281;6.35e-08;2!UBERON:0004457;7.10e-07;9!UBERON:0000042;7.10e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0005284,1.15e-11,5;UBERON:0003688,5.94e-10,6;UBERON:0002358,5.94e-10,6;UBERON:0003684,5.94e-10,6;UBERON:0001178,5.94e-10,6;UBERON:0001044,1.06e-09,6;UBERON:0003293,1.06e-09,6;UBERON:0003294,1.06e-09,6;UBERON:0010047,1.06e-09,6;UBERON:0000167,1.06e-09,6;UBERON:0005629,4.38e-08,2;UBERON:0005358,4.38e-08,2;UBERON:0001886,4.38e-08,2;UBERON:0004086,4.38e-08,2;UBERON:0005282,4.38e-08,2;UBERON:0005281,4.38e-08,2;UBERON:0001897,5.74e-08,2;UBERON:0010225,5.74e-08,2|phase1_expression=0.181678379270557,0.214100523890983,1.69145284915165,0,3.12872766099101,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0.311211035399766,0.404132016209064,0.490385709340376,0.605429710579726,1.72852777344,0,0,0,0,0,0.161872944368132,0,0,0,0.413303124703062,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.723033089650446,0.220587945464788,0.435758888184812,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.542530047399471,0,0,0,0,0,0,4.1389228517002,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,1.66435439510497,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0.429680979473094,0.145016693914229,0.340906509664404,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0.632758849437452,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,1.3754865741837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0.399158742865633,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0.16480387422676,20.4791645884154,0,0.276283915531148,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0.32681539055697,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.61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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9811 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=355bp_to_ENST00000519469_5end | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_15_at_RAD21_5end | |||
|id=chr8:117878863..117878874,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;8.29e-19;3!CL:0002623;1.48e-18;3!CL:0000622;1.58e-11;5!CL:0000154;9.25e-10;6!CL:0002549;6.35e-08;2!CL:0002588;6.35e-08;2!CL:0000150;8.58e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,6.06e-19,3;CL:0002623,1.94e-18,3;CL:0000622,1.85e-11,5;CL:0000154,1.06e-09,6;CL:0002549,4.38e-08,2;CL:0002588,7.03e-08,2;CL:0000150,9.37e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.50e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.20e-10!115;UBERON:0001737!5.40e-09!9;UBERON:0001557!3.86e-08!19;UBERON:0002616!6.91e-08!59;UBERON:0000481!3.99e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;1.58e-11;5!UBERON:0003688;6.94e-10;6!UBERON:0002358;6.94e-10;6!UBERON:0003684;6.94e-10;6!UBERON:0001178;6.94e-10;6!UBERON:0001044;9.25e-10;6!UBERON:0003293;9.25e-10;6!UBERON:0003294;9.25e-10;6!UBERON:0010047;9.25e-10;6!UBERON:0003408;9.25e-10;6!UBERON:0000167;9.25e-10;6!UBERON:0001041;4.36e-09;14!UBERON:0001897;6.35e-08;2!UBERON:0005629;6.35e-08;2!UBERON:0005358;6.35e-08;2!UBERON:0001886;6.35e-08;2!UBERON:0004086;6.35e-08;2!UBERON:0010225;6.35e-08;2!UBERON:0005282;6.35e-08;2!UBERON:0005281;6.35e-08;2!UBERON:0004457;7.10e-07;9!UBERON:0000042;7.10e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,1.15e-11,5;UBERON:0003688,5.94e-10,6;UBERON:0002358,5.94e-10,6;UBERON:0003684,5.94e-10,6;UBERON:0001178,5.94e-10,6;UBERON:0001044,1.06e-09,6;UBERON:0003293,1.06e-09,6;UBERON:0003294,1.06e-09,6;UBERON:0010047,1.06e-09,6;UBERON:0000167,1.06e-09,6;UBERON:0005629,4.38e-08,2;UBERON:0005358,4.38e-08,2;UBERON:0001886,4.38e-08,2;UBERON:0004086,4.38e-08,2;UBERON:0005282,4.38e-08,2;UBERON:0005281,4.38e-08,2;UBERON:0001897,5.74e-08,2;UBERON:0010225,5.74e-08,2 | |||
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| |||
|short_description=p15@RAD21 | |||
}} |
Revision as of 03:16, 14 September 2013
Short description: | p15@RAD21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_RAD21_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 355bp_to_ENST00000519469_5end |
EntrezGene: | RAD21 |
HGNC: | 9811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 6.06e-19 | 3 |
acinar cell of salivary gland | 1.94e-18 | 3 |
acinar cell | 1.85e-11 | 5 |
protein secreting cell | 1.06e-09 | 6 |
fibroblast of choroid plexus | 4.38e-08 | 2 |
smooth muscle cell of the umbilical vein | 7.03e-08 | 2 |
glandular epithelial cell | 9.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 1.15e-11 | 5 |
omentum | 5.94e-10 | 6 |
peritoneum | 5.94e-10 | 6 |
abdominal cavity | 5.94e-10 | 6 |
visceral peritoneum | 5.94e-10 | 6 |
saliva-secreting gland | 1.06e-09 | 6 |
gland of oral region | 1.06e-09 | 6 |
gland of foregut | 1.06e-09 | 6 |
oral gland | 1.06e-09 | 6 |
oral cavity | 1.06e-09 | 6 |
vascular plexus | 4.38e-08 | 2 |
ventricle of nervous system | 4.38e-08 | 2 |
choroid plexus | 4.38e-08 | 2 |
brain ventricle | 4.38e-08 | 2 |
ventricular system of brain | 4.38e-08 | 2 |
ventricular system of central nervous system | 4.38e-08 | 2 |
dorsal plus ventral thalamus | 5.74e-08 | 2 |
thalamic complex | 5.74e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.