FFCP PHASE1:Hg19::chr10:101691118..101691135,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23268 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30373 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-365bp_to_ENST00000543621,uc001kqh.2_5end | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_6_at_DNMBP_5end | |||
|id=chr10:101691118..101691135,- | |||
|ontology_enrichment_celltype=CL:0000066!4.14e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:0000322;6.76e-18;3!CL:0000083;1.21e-13;4!CL:0002202;7.48e-07;9!CL:0002632;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.76e-18,3;CL:0000083,1.13e-13,4;CL:0002202,7.48e-07,9;CL:0002632,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.07e-09!106;DOID:4929!2.09e-09!2;DOID:0050687!1.53e-08!143;DOID:14566!4.81e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:4929;4.22e-98;2!DOID:3910;4.32e-26;2!DOID:1793;1.21e-13;4!DOID:3908;2.66e-11;5!DOID:170;1.50e-09;6!DOID:299;5.95e-09;25!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,4.22e-98,2;DOID:3910,4.32e-26,2;DOID:1793,1.13e-13,4;DOID:3908,2.66e-11,5;DOID:170,1.44e-09,6;DOID:299,5.95e-09,25;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:305,2.62e-08,106;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0002394!1.53e-09!4;UBERON:0003928!1.53e-09!4;UBERON:0000488!5.16e-09!4;UBERON:0002294!5.90e-09!7;UBERON:0001173!5.90e-09!7;UBERON:0004912!5.90e-09!7;UBERON:0009856!3.56e-08!26;UBERON:0005911!5.73e-08!82;UBERON:0004907!2.33e-07!5;UBERON:0003929!2.56e-07!54;UBERON:0009854!3.83e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;5.12e-50;1!UBERON:0003703;5.12e-50;1!UBERON:0001174;5.12e-50;1!UBERON:0004914;5.12e-50;1!UBERON:0004903;4.32e-26;2!UBERON:0002173;4.32e-26;2!UBERON:0002186;4.32e-26;2!UBERON:0000058;8.12e-21;10!UBERON:0004821;6.76e-18;3!UBERON:0007499;6.76e-18;3!UBERON:0003215;6.76e-18;3!UBERON:0010368;6.76e-18;3!UBERON:0009911;6.76e-18;3!UBERON:0002299;6.76e-18;3!UBERON:0006524;6.76e-18;3!UBERON:0008874;6.76e-18;3!UBERON:0002169;6.76e-18;3!UBERON:0004894;6.76e-18;3!UBERON:0002114;1.03e-17;2!UBERON:0009856;8.82e-14;4!UBERON:0002394;1.21e-13;4!UBERON:0003928;1.21e-13;4!UBERON:0002108;3.42e-11;4!UBERON:0002294;2.26e-08;7!UBERON:0001173;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,6.58e-50,1;UBERON:0003703,6.58e-50,1;UBERON:0001174,6.58e-50,1;UBERON:0004914,6.58e-50,1;UBERON:0004903,4.32e-26,2;UBERON:0002173,4.32e-26,2;UBERON:0002186,4.32e-26,2;UBERON:0004821,6.76e-18,3;UBERON:0003215,6.76e-18,3;UBERON:0010368,6.76e-18,3;UBERON:0009911,6.76e-18,3;UBERON:0002299,6.76e-18,3;UBERON:0006524,6.76e-18,3;UBERON:0008874,6.76e-18,3;UBERON:0002169,6.76e-18,3;UBERON:0004894,6.76e-18,3;UBERON:0002114,1.12e-17,2;UBERON:0000058,1.72e-11,19;UBERON:0002108,3.60e-11,4;UBERON:0002394,1.57e-09,6;UBERON:0003928,1.57e-09,6;UBERON:0007499,5.49e-09,25;UBERON:0009856,1.11e-08,26;UBERON:0002294,8.85e-07,9;UBERON:0001173,8.85e-07,9;UBERON:0004912,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0.516833518338658,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847168708148562,0,0,0.633309773357254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8563893593836,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.449341755736634,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0.720273989940749,3.72757606696298,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0.422401346077626,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.354581522651905,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,1.79650404213174,0,0,0,0,0,0 | |||
|short_description=p6@DNMBP | |||
}} |
Revision as of 04:30, 11 January 2014
Short description: | p6@DNMBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DNMBP_5end |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | -365bp_to_ENST00000543621, uc001kqh.2_5end |
EntrezGene: | DNMBP |
HGNC: | 30373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.76e-18 | 3 |
epithelial cell of pancreas | 1.13e-13 | 4 |
epithelial cell of tracheobronchial tree | 7.48e-07 | 9 |
epithelial cell of lower respiratory tract | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 6.58e-50 | 1 |
extrahepatic bile duct | 6.58e-50 | 1 |
common bile duct | 6.58e-50 | 1 |
duodenal papilla | 6.58e-50 | 1 |
bronchoalveolar duct junction | 4.32e-26 | 2 |
alveolar duct | 4.32e-26 | 2 |
bronchiole | 4.32e-26 | 2 |
pulmonary alveolus epithelium | 6.76e-18 | 3 |
alveolus | 6.76e-18 | 3 |
pulmonary lobule | 6.76e-18 | 3 |
lobule | 6.76e-18 | 3 |
alveolus of lung | 6.76e-18 | 3 |
alveolar system | 6.76e-18 | 3 |
pulmonary acinus | 6.76e-18 | 3 |
alveolar sac | 6.76e-18 | 3 |
alveolar wall | 6.76e-18 | 3 |
duodenum | 1.12e-17 | 2 |
duct | 1.72e-11 | 19 |
small intestine | 3.60e-11 | 4 |
bile duct | 1.57e-09 | 6 |
digestive system duct | 1.57e-09 | 6 |
epithelial sac | 5.49e-09 | 25 |
sac | 1.11e-08 | 26 |
biliary system | 8.85e-07 | 9 |
biliary tree | 8.85e-07 | 9 |
biliary bud | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 4.22e-98 | 2 |
lung adenocarcinoma | 4.32e-26 | 2 |
pancreatic cancer | 1.13e-13 | 4 |
non-small cell lung carcinoma | 2.66e-11 | 5 |
endocrine gland cancer | 1.44e-09 | 6 |
adenocarcinoma | 5.95e-09 | 25 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
carcinoma | 2.62e-08 | 106 |
lung carcinoma | 7.48e-07 | 9 |