FFCP PHASE1:Hg19::chr10:82228012..82228045,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:82228012..82228045,+ | |||
|id=chr10:82228012..82228045,+ | |||
|ontology_enrichment_celltype=CL:0000115!7.70e-21!35;CL:0002139!1.05e-19!24;CL:0002078!1.43e-16!44;CL:0000791!1.31e-15!18;CL:0000789!1.31e-15!18;CL:0002420!1.31e-15!18;CL:0002419!1.31e-15!18;CL:0000790!1.31e-15!18;CL:0000084!4.84e-15!25;CL:0000827!4.84e-15!25;CL:0000071!2.81e-14!18;CL:0002546!2.81e-14!18;CL:0000625!1.45e-11!11;CL:0000213!2.31e-10!57;CL:0000215!2.31e-10!57;CL:0000542!1.27e-07!53;CL:0000051!1.27e-07!53;CL:0000838!3.51e-07!52;CL:0005020!4.81e-07!6;CL:0002138!4.81e-07!6;CL:0005022!4.81e-07!6;CL:0000624!5.81e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.42e-31;18!CL:0000789;1.42e-31;18!CL:0002419;1.42e-31;18!CL:0000084;8.02e-29;25!CL:0000625;2.98e-22;11!CL:0002139;7.69e-19;24!CL:0000115;3.44e-16;36!CL:0002138;3.00e-13;6!CL:0000624;5.37e-13;6!CL:0002078;7.65e-11;45!CL:0000226;1.73e-10;3!CL:0000842;1.73e-10;3!CL:0000071;1.57e-09;18!CL:0000213;1.75e-08;58!CL:0000215;1.75e-08;58!CL:0000542;1.62e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.34e-32,18;CL:0000789,2.34e-32,18;CL:0002420,2.34e-32,18;CL:0002419,2.34e-32,18;CL:0000790,2.34e-32,18;CL:0000084,2.53e-29,25;CL:0000827,2.53e-29,25;CL:0000625,1.07e-22,11;CL:0000115,3.90e-21,36;CL:0002139,4.61e-19,24;CL:0002078,4.78e-16,45;CL:0000838,1.26e-13,52;CL:0000624,2.20e-13,6;CL:0000542,2.74e-13,53;CL:0000051,2.74e-13,53;CL:0005020,3.52e-13,6;CL:0002138,3.52e-13,6;CL:0005022,3.52e-13,6;CL:0000213,4.15e-13,58;CL:0000215,4.15e-13,58;CL:0000226,2.64e-10,3;CL:0000842,2.64e-10,3;CL:0000071,9.69e-10,18;CL:0002546,9.69e-10,18;CL:0002087,5.94e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;1.42e-31;18!CL:0005022;3.00e-13;6!CL:0002546;1.57e-09;18!CL:0000051;1.62e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.03e-17!115;UBERON:0001986!2.81e-14!18;UBERON:0004638!2.81e-14!18;UBERON:0004852!2.81e-14!18;UBERON:0000487!3.01e-12!22;UBERON:0006914!5.13e-10!25;UBERON:0004111!8.09e-08!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002465;3.41e-11;10!UBERON:0002193;8.31e-11;42!UBERON:0001473;7.54e-10;8!UBERON:0004536;7.54e-10;8!UBERON:0006558;7.54e-10;8!UBERON:0000487;1.45e-09;22!UBERON:0004638;1.57e-09;18!UBERON:0001986;1.57e-09;18!UBERON:0004852;1.57e-09;18!UBERON:0000178;1.72e-09;15!UBERON:0000179;1.72e-09;15!UBERON:0000463;1.72e-09;15!UBERON:0006914;3.19e-08;25!UBERON:0002405;3.55e-08;27!UBERON:0002370;5.14e-08;2!UBERON:0005058;5.14e-08;2!UBERON:0009113;5.14e-08;2!UBERON:0002390;1.41e-07;32!UBERON:0005162;4.86e-07;2!UBERON:0000122;4.86e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,3.82e-11,10;UBERON:0000487,8.29e-10,22;UBERON:0001473,8.46e-10,8;UBERON:0004536,8.46e-10,8;UBERON:0006558,8.46e-10,8;UBERON:0004638,9.69e-10,18;UBERON:0001986,9.69e-10,18;UBERON:0004852,9.69e-10,18;UBERON:0000178,1.53e-09,15;UBERON:0000179,1.53e-09,15;UBERON:0000463,1.53e-09,15;UBERON:0006914,1.96e-08,25;UBERON:0002370,2.42e-08,4;UBERON:0005058,2.42e-08,4;UBERON:0009113,2.42e-08,4;UBERON:0003295,2.42e-08,4;UBERON:0005562,2.42e-08,4;UBERON:0004535,2.68e-08,109;UBERON:0001009,6.09e-08,112;UBERON:0004177,7.39e-08,7;UBERON:0005057,7.39e-08,7;UBERON:0005162,6.46e-07,2;UBERON:0000122,6.46e-07,2;UBERON:0000055,9.76e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0,0.971680998056939,0.257575567634187,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,1.180258620683,1.96505381374582,1.43921049299656,0.334372990781356,4.88883399950386,2.36723902867367,0,0.222820913770347,0.294605907474837,0,0.812411591295047,0,0,0.164437904603676,0.276350017785848,0.869409257205157,3.55887751588945,3.47803076516627,3.1360657141493,0.113309342697566,1.91610246800961,0.68725489096526,2.02415753615602,2.22995790026868,1.30216690771284,2.85135613334512,1.95747654801105,3.58362511232371,1.24930726552346,1.65744076430812,4.10563998460523,0.403213486449465,0.267440195783507,1.44824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,1.78886166630035,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,1.6507082516404,0.835979866147242,1.55050055501597,1.06729878806013,3.3472061276467,1.61131726843659,1.52054421143703,0.976248230192678,1.10298924103761,0,0.625098097988558,1.12264686313085,0.900891843866578,1.53316637465883,0.949265659568129,1.46561395144326,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.463721619900307,0,1.29929802984966,0.462985512576611,2.47330397904978,0,0,0.246217006087397,0,0,0,0,0.283550194484773,0,0,0,0,0.176096868026452,0.621984346622316,1.00883967391873,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,1.18218456121156,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0,2.89475236572042,2.15714200818617,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0.211103257785751,2.27466768141793,1.87103075804167,0.215915916102139,3.08454505380579,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0.443430153536676,0,0.507447609232169,0,0.569647187174163,1.66762242820452,2.05681136543097,1.29694662238543,1.62009431171434,0,0,0,0,0.557409525377156,0,0,0,0.399158742865633,0.191505370132367,0.635020748171649,0,0.561594356226918,0.684704037099577,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,1.17206543417515,0,0.111443384277478,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0,0.828851746593443,0.251932747854276,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0,0,1.02193298195737,0.31396051279005,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,1.14581926067151,0,0,0.364909578431332,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0.313932918407225,1.19472429772959,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,2.62887354279315,0,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0.394028536495991,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0.52893040697076,0,0,0.533937062838473,1.25763444079733,1.24271716604159,3.47316215268366,0,0.121792598380896,0,0.544017803369474,0.2506898940227,0,0,0.157054096250234,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.558867626472451,0,0,0.151649117541648,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0,0.345786262321089,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.507326481551255,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.543757863814654,0.328863867814245,0,0,0.549451649953598,0.314231179832004,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0.62041277132864,0,0.559277158988962,0,0,0,0.102662806856247,0,0,0,0,0,0,0.549702583727146,0.150962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| |||
|short_description=p@chr10:82228012..82228045,+ | |||
}} |
Revision as of 03:50, 11 January 2014
Short description: | p@chr10:82228012..82228045, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:82228012..82228045, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.34e-32 | 18 |
alpha-beta T cell | 2.34e-32 | 18 |
immature T cell | 2.34e-32 | 18 |
mature T cell | 2.34e-32 | 18 |
immature alpha-beta T cell | 2.34e-32 | 18 |
T cell | 2.53e-29 | 25 |
pro-T cell | 2.53e-29 | 25 |
CD8-positive, alpha-beta T cell | 1.07e-22 | 11 |
endothelial cell | 3.90e-21 | 36 |
endothelial cell of vascular tree | 4.61e-19 | 24 |
meso-epithelial cell | 4.78e-16 | 45 |
lymphoid lineage restricted progenitor cell | 1.26e-13 | 52 |
CD4-positive, alpha-beta T cell | 2.20e-13 | 6 |
lymphocyte | 2.74e-13 | 53 |
common lymphoid progenitor | 2.74e-13 | 53 |
lymphangioblast | 3.52e-13 | 6 |
endothelial cell of lymphatic vessel | 3.52e-13 | 6 |
vascular lymphangioblast | 3.52e-13 | 6 |
lining cell | 4.15e-13 | 58 |
barrier cell | 4.15e-13 | 58 |
single nucleate cell | 2.64e-10 | 3 |
mononuclear cell | 2.64e-10 | 3 |
blood vessel endothelial cell | 9.69e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.69e-10 | 18 |
nongranular leukocyte | 5.94e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 3.82e-11 | 10 |
simple squamous epithelium | 8.29e-10 | 22 |
lymphatic vessel | 8.46e-10 | 8 |
lymph vasculature | 8.46e-10 | 8 |
lymphatic part of lymphoid system | 8.46e-10 | 8 |
blood vessel endothelium | 9.69e-10 | 18 |
endothelium | 9.69e-10 | 18 |
cardiovascular system endothelium | 9.69e-10 | 18 |
blood | 1.53e-09 | 15 |
haemolymphatic fluid | 1.53e-09 | 15 |
organism substance | 1.53e-09 | 15 |
squamous epithelium | 1.96e-08 | 25 |
thymus | 2.42e-08 | 4 |
hemolymphoid system gland | 2.42e-08 | 4 |
thymic region | 2.42e-08 | 4 |
pharyngeal gland | 2.42e-08 | 4 |
thymus primordium | 2.42e-08 | 4 |
cardiovascular system | 2.68e-08 | 109 |
circulatory system | 6.09e-08 | 112 |
hemopoietic organ | 7.39e-08 | 7 |
immune organ | 7.39e-08 | 7 |
multi cell component structure | 6.46e-07 | 2 |
neuron projection bundle | 6.46e-07 | 2 |
vessel | 9.76e-07 | 68 |