FFCP PHASE1:Hg19::chr11:118122996..118123090,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196264 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27279 | |||
|TSSclassifier=not | |||
|UniProt=Q6UWV2,B4DLD5,E9PPB1,B4E2I8,A8K025 | |||
|association_with_transcript=0bp_to_ENST00000278949,ENST00000446386,ENST00000525386,ENST00000527472,NM_198275,uc001psm.2,uc009yzy.2,uc010rxy.1,uc010rxz.1_5end | |||
|description=CAGE_peak_1_at_MPZL3_5end | |||
|id=chr11:118122996..118123090,- | |||
|ontology_enrichment_celltype=CL:0000738!9.71e-14!140;CL:0000066!4.20e-12!254;CL:0000542!1.18e-11!53;CL:0000051!1.18e-11!53;CL:0002087!1.30e-11!119;CL:0000838!1.46e-11!52;CL:0000791!8.10e-11!18;CL:0000789!8.10e-11!18;CL:0002420!8.10e-11!18;CL:0002419!8.10e-11!18;CL:0000790!8.10e-11!18;CL:0000037!2.73e-10!172;CL:0000566!2.73e-10!172;CL:0002032!5.16e-10!165;CL:0000837!5.16e-10!165;CL:0002031!1.02e-09!124;CL:0000084!1.14e-09!25;CL:0000827!1.14e-09!25;CL:0002076!5.38e-09!43;CL:0000223!1.38e-08!59;CL:0000988!1.07e-07!182;CL:0000625!5.57e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.73e-11;18!CL:0000789;4.73e-11;18!CL:0002419;4.73e-11;18!CL:0000084;8.01e-10;25!CL:0002076;5.57e-08;42!CL:0000625;4.01e-07;11!CL:0000542;4.85e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.62e-14,136;CL:0000066,2.13e-13,253;CL:0002087,2.76e-12,115;CL:0000542,5.40e-12,53;CL:0000051,5.40e-12,53;CL:0000838,6.74e-12,52;CL:0000791,5.22e-11,18;CL:0000789,5.22e-11,18;CL:0002420,5.22e-11,18;CL:0002419,5.22e-11,18;CL:0000790,5.22e-11,18;CL:0000037,6.67e-11,168;CL:0002032,1.07e-10,161;CL:0000837,1.07e-10,161;CL:0002031,3.25e-10,120;CL:0002076,4.50e-10,42;CL:0000084,7.78e-10,25;CL:0000827,7.78e-10,25;CL:0000223,2.44e-09,58;CL:0000988,2.42e-08,177;CL:0000625,4.30e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.73e-11;18!CL:0000051;4.85e-07;53 | |||
|ontology_enrichment_disease=DOID:305!4.19e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.35e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.89e-08!169;UBERON:0000925!6.89e-08!169;UBERON:0006595!6.89e-08!169;UBERON:0001004!7.45e-08!72;UBERON:0004921!3.99e-07!129;UBERON:0004185!3.99e-07!129;UBERON:0000065!5.08e-07!53 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.68e-09,160;UBERON:0000925,3.68e-09,160;UBERON:0006595,3.68e-09,160;UBERON:0001041,6.37e-09,87;UBERON:0004921,7.87e-09,118;UBERON:0001004,1.29e-07,74;UBERON:0001007,1.77e-07,145;UBERON:0001555,1.77e-07,145;UBERON:0007026,1.77e-07,145;UBERON:0000065,6.60e-07,54 | |||
|phase1_expression=0.726713517082227,0.856402095563933,1.83240725324762,0,1.34088328328186,1.74467704820074,0,0,0,21.3788524756313,10.4670175195864,43.2513916817741,38.5099788213542,0.123766352960047,1.65698687863958,3.36162573225888,3.61616716814386,0.730310090387373,1.46379839637152,1.60057375499824,0.612002073732759,1.25381888591235,0.85870796139317,0.958120975510189,0.251085279189606,7.56492716904717,7.96375717664474,6.13944094246698,25.1753137183299,31.0901812458742,9.90823189222886,5.51652734687356,8.73497164456925,19.227208528673,8.52139206383318,4.26507697462265,2.93600439334847,2.76997704265939,11.2304890583279,11.718587018656,3.35873211359887,5.18229865630367,4.12120908214698,6.83371722263954,2.26725566213286,9.21819432513701,6.50801303335917,4.11167888021826,9.60089749774821,6.61692502340946,6.66017836975662,7.33094912654614,7.23965929546899,2.5819387343353,12.1883837934908,7.71793592124679,4.63940455098338,6.51698104890745,3.97909060082173,6.09765151444578,5.75403413219137,4.61791820261403,3.19141852194611,6.39337125799041,3.19230162491442,2.8369261234557,7.4738669879469,6.02996796616184,3.12889751052121,6.73285418585862,7.26479403160043,4.05105399586321,11.3926459478718,2.5350634357433,1.27562579979026,4.19317291016752,4.6054738770063,4.95583746376971,6.91120022797445,3.13514018115373,2.98375015798635,2.92262646023414,7.03984977845291,6.55366333514558,8.89509253863555,14.5088275672612,6.80673177961221,4.02326707968138,3.30522436392431,11.4486450544244,10.2458334439701,8.80855784056408,9.55683070313072,0,10.0891541336676,0.526768169550154,88.7161063213387,68.3838727183547,72.7829306458263,33.1029260873543,43.9995059955347,46.8713327677386,46.7584148178987,43.672899098988,50.0830042707223,53.1681347000691,68.5133775325489,34.8408389653836,24.581216688817,39.6295350094859,40.8998026323056,52.4543585180445,65.2460877913066,57.2537372111986,77.3562876156828,44.5305716801435,75.8776577331804,93.810292616758,129.799102006005,23.2552752456591,29.2987554235388,23.7613011112094,36.2886036977432,28.6690008985897,36.2299107001803,24.3880569605337,18.064815932263,91.1262479375791,63.6507665964747,66.9088745938531,0,0.670700859703636,2.42938867502708,1.44575660953827,1.00267582127178,2.60723734129483,6.36228757640879,5.83961844363163,1.79616152611729,2.21729397462564,2.98638271356629,6.94189100137877,11.6574492253614,14.4605932685927,5.8418530857843,7.66170844116776,7.04677190749985,1.90792499444274,1.71598473234038,0.74291500265913,6.75792185046797,3.4409383804245,2.08284300964557,5.6530794192401,2.93649605346934,3.57653454522088,3.34391946458897,3.10100111003195,8.53839030448104,8.03329470635209,6.0424397566372,0.760272105718513,2.68468263302986,3.67663080345869,3.24056779152704,6.25098097988558,3.59246996201872,4.0540132973996,7.66583187329416,1.89853131913626,2.38162267109529,79.068250461638,96.9450660370813,15.6993858771312,0.496971951695318,3.41902381494365,2.51577443545116,2.0078563452417,0.709336764396714,1.68203280042692,3.20246987189115,3.20667812942308,1.24484414159907,2.15537075311501,2.61539044981534,3.17850598054356,0,0,0,0.570471821544449,0,0.352303495931295,0.323745888736263,0.421352420106746,0,0.737005903870608,0,0,0,0.910161361938026,0,1.0100166837244,0.500474079487857,0.831192346452549,0,0.30648779579902,0,1.13432183160021,0.89694817844431,0.213557388818567,0.211931901159562,1.80054657650641,0.103052529238439,0.257640540045629,0,1.18143432568886,0.584622030967192,0.252433774244115,0.184099797284599,0,0.355009592516614,0.302256294682921,1.3564847384839,17.3934767846967,30.8203116267643,13.1930113878942,1.82960559194393,2.78312513475119,1.74290914304278,1.14027160516907,2.27088765788066,1.82488679537915,0,0.643240938192885,0,0,0,8.04486240270938,11.4637589253109,10.6044853148732,10.4779274095774,10.0224544282507,11.3889897173326,10.9213359609733,9.8110732562673,8.84918460976698,0.738155454624648,2.80483547606892,2.4694440679884,0,13.9430538304014,10.8110993834539,8.86184860022106,3.09024169590255,49.9333060485041,2.57351715447788,19.7550513735526,8.99214026060957,10.4550131308096,14.2586205544136,0,0,0,1.04337364477569,3.40485213283883,3.89789408954899,3.70388410061289,2.28304982681518,26.0767451326561,25.7545848628462,3.20082107913617,13.1042388477973,9.21513206190115,20.6214434770909,43.5073712035046,27.3625937677806,13.6128954508329,12.4972593561004,5.36735750831296,0.985326475791887,0,1.4512968087854,1.44119953416961,2.39860623510122,0.126995788584338,0,0,0,0.411309970813294,0,0.285826432630578,2.01835951821649,6.10344096366592,1.39342743059805,1.03417372606222,0,0.845302752556,0.797814349754612,1.04007436911366,0.771622122786426,1.41849132023278,1.0656887160644,0.285955987316295,0,1.64648067356154,0.977208552881205,0,0,12.6604538365026,12.2014684204041,13.5963268007598,1.2162378064119,4.52031382288914,2.10833939483032,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.895304816199478,11.4326846873398,49.0606592902799,36.6566877261179,40.9414285732397,2.28685161800217,2.60279707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| |||
|short_description=p1@MPZL3 | |||
}} |
Revision as of 10:37, 11 January 2014
Short description: | p1@MPZL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MPZL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000278949, ENST00000446386, ENST00000525386, ENST00000527472, NM_198275, uc001psm.2, uc009yzy.2, uc010rxy.1, uc010rxz.1_5end |
EntrezGene: | MPZL3 |
HGNC: | 27279 |
UniProt: | Q6UWV2B4DLD5E9PPB1B4E2I8A8K025 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.62e-14 | 136 |
epithelial cell | 2.13e-13 | 253 |
nongranular leukocyte | 2.76e-12 | 115 |
lymphocyte | 5.40e-12 | 53 |
common lymphoid progenitor | 5.40e-12 | 53 |
lymphoid lineage restricted progenitor cell | 6.74e-12 | 52 |
mature alpha-beta T cell | 5.22e-11 | 18 |
alpha-beta T cell | 5.22e-11 | 18 |
immature T cell | 5.22e-11 | 18 |
mature T cell | 5.22e-11 | 18 |
immature alpha-beta T cell | 5.22e-11 | 18 |
hematopoietic stem cell | 6.67e-11 | 168 |
hematopoietic oligopotent progenitor cell | 1.07e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 3.25e-10 | 120 |
endo-epithelial cell | 4.50e-10 | 42 |
T cell | 7.78e-10 | 25 |
pro-T cell | 7.78e-10 | 25 |
endodermal cell | 2.44e-09 | 58 |
hematopoietic cell | 2.42e-08 | 177 |
CD8-positive, alpha-beta T cell | 4.30e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.68e-09 | 160 |
endoderm | 3.68e-09 | 160 |
presumptive endoderm | 3.68e-09 | 160 |
foregut | 6.37e-09 | 87 |
subdivision of digestive tract | 7.87e-09 | 118 |
respiratory system | 1.29e-07 | 74 |
digestive system | 1.77e-07 | 145 |
digestive tract | 1.77e-07 | 145 |
primitive gut | 1.77e-07 | 145 |
respiratory tract | 6.60e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.35e-10 | 106 |