FFCP PHASE1:Hg19::chr11:67007760..67007773,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22992 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13606 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000517637_5end | |||
|description=CAGE_peak_17_at_KDM2A_5end | |||
|id=chr11:67007760..67007773,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.02e-15!45;CL:0002057!1.48e-14!42;CL:0000557!7.32e-14!71;CL:0000839!7.07e-13!70;CL:0000766!2.48e-12!76;CL:0002009!3.75e-12!65;CL:0002031!1.05e-10!124;CL:0002194!1.63e-10!63;CL:0000576!1.63e-10!63;CL:0000040!1.63e-10!63;CL:0000559!1.63e-10!63;CL:0000738!3.04e-10!140;CL:0002087!2.60e-08!119;CL:0000763!1.62e-07!112;CL:0000049!1.62e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000097;9.11e-19;5!CL:0000136;9.17e-13;13!CL:0000163;1.10e-10;9!CL:0002393;1.80e-07;6!CL:0002397;1.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.16e-18,5;CL:0002028,1.16e-18,5;CL:0000766,2.96e-12,72;CL:0000136,4.34e-11,15;CL:0000839,7.78e-11,66;CL:0000557,1.17e-10,67;CL:0000163,1.25e-10,9;CL:0000763,9.86e-08,108;CL:0000049,9.86e-08,108;CL:0000473,4.87e-07,48;CL:0000234,4.87e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.63e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.60e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.97e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.95e-11!80;UBERON:0001474!7.58e-10!86;UBERON:0002390!9.34e-10!102;UBERON:0003061!9.34e-10!102;UBERON:0002193!2.47e-09!112;UBERON:0004765!1.76e-08!101;UBERON:0001434!1.76e-08!101;UBERON:0002405!2.72e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.63e-11;1!UBERON:0000996;3.63e-11;1!UBERON:0001153;3.63e-11;1!UBERON:0009854;3.63e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,4.01e-11,1;UBERON:0001154,6.00e-11,1;UBERON:0001153,6.00e-11,1;UBERON:0001045,6.00e-11,1;UBERON:0002371,2.84e-09,76;UBERON:0001474,1.63e-08,82;UBERON:0004765,1.17e-07,90;UBERON:0002405,2.24e-07,93;UBERON:0002390,6.07e-07,98;UBERON:0003061,6.07e-07,98;UBERON:0001434,8.81e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,1.66198622559563,1.40381113229099,0.651032612147555,0,0,0,0,0,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0.709446689665756,0.344745680736619,0,0,0,0.272906150057846,0.898893937780338,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0.290209238628584,0.56738522469114,1.86846674698672,0,0,0.217188844705117,0.605399502633369,1.84138817993782,2.84816148696796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,2.28060927094849,1.29707958075265,3.02981840223312,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,2.57602529119306,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0.19924798825107,1.10513566212459,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.505492637027904,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0.674921674654501,0.77380195455795,0,0,0.315222829196793,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.427149650270779,0,0,0,0,0,0,1.63205341010842,3.0082787282724,2.45076461410769,4.26234419922746,0,0,0,0.250381861413,0,0.554645257684261,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.225630985047772,0,0,0,0.982631505060581,0,0,0,0,0.126831620387814,0,0,0,0.175871244359621,0.127762427639595,0,0.672567444437648,0,0,0.0887023701626388,0,2.22934412268644,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0.215927591218621,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0.250707539292375,0,0.267964130156178,0,0,0,0.23806443146374,0,0.248298857183432,0,0.190941474834495,0.202117188958219,0,0,0.0673520530145875,0.143444410785353,0,0.162806537221949,0,0,0,0,0,0,1.33151354837103,0,0 | |||
|short_description=p17@KDM2A | |||
}} |
Revision as of 08:55, 11 January 2014
Short description: | p17@KDM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_KDM2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000517637_5end |
EntrezGene: | KDM2A |
HGNC: | 13606 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.16e-18 | 5 |
basophil mast progenitor cell | 1.16e-18 | 5 |
myeloid leukocyte | 2.96e-12 | 72 |
fat cell | 4.34e-11 | 15 |
myeloid lineage restricted progenitor cell | 7.78e-11 | 66 |
granulocyte monocyte progenitor cell | 1.17e-10 | 67 |
endocrine cell | 1.25e-10 | 9 |
myeloid cell | 9.86e-08 | 108 |
common myeloid progenitor | 9.86e-08 | 108 |
defensive cell | 4.87e-07 | 48 |
phagocyte | 4.87e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
vagina | 4.01e-11 | 1 |
vermiform appendix | 6.00e-11 | 1 |
caecum | 6.00e-11 | 1 |
midgut | 6.00e-11 | 1 |
bone marrow | 2.84e-09 | 76 |
bone element | 1.63e-08 | 82 |
skeletal element | 1.17e-07 | 90 |
immune system | 2.24e-07 | 93 |
hematopoietic system | 6.07e-07 | 98 |
blood island | 6.07e-07 | 98 |
skeletal system | 8.81e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.97e-11 | 1 |