FFCP PHASE1:Hg19::chr14:52118380..52118390,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=145438 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20129 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=71bp_to_NR_037676_5end | |||
|description=CAGE_peak_5_at_FRMD6-AS1_5end | |||
|id=chr14:52118380..52118390,- | |||
|ontology_enrichment_celltype=CL:0002620!1.51e-12!23;CL:0000055!1.67e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000222;1.40e-14;1!CL:0002591;1.40e-14;1!CL:0002620;1.49e-09;23!CL:0002596;6.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.11e-14,1;CL:0002620,1.98e-09,23;CL:0002596,4.69e-08,2;CL:0000057,5.80e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!6.05e-08!40;UBERON:0002199!4.32e-07!45;UBERON:0002416!4.32e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;6.14e-08;2!UBERON:0002012;6.14e-08;2!UBERON:0005396;6.14e-08;2!UBERON:0008886;6.14e-08;2!UBERON:0002097;8.14e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,4.69e-08,2;UBERON:0002097,5.06e-08,41;UBERON:0000078,7.52e-08,2;UBERON:0007497,7.52e-08,2;UBERON:0003643,7.52e-08,2;UBERON:0003504,7.52e-08,2;UBERON:0003469,7.52e-08,2;UBERON:0003496,7.52e-08,2;UBERON:0002012,7.52e-08,2;UBERON:0008886,7.52e-08,2;UBERON:0007303,7.52e-08,2;UBERON:0002061,7.52e-08,2;UBERON:0005432,7.52e-08,2;UBERON:0004363,7.52e-08,2;UBERON:0002199,3.85e-07,46;UBERON:0002416,3.85e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0,0,0,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0.651844533267181,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0,0.22452937262617,0,0,0,0,0,0,0,0,0,2.51577443545116,0.286836620748814,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0,0.206651562351531,0,0.494533858557114,0,0,0.168336113954066,0,0.277064115484183,0,0.612975591598039,0,0,0.717558542755448,0.640672166455702,0.211931901159562,1.20036438433761,0.206105058476878,2.83404594050192,0.37223371266318,1.0126579934476,0.389748020644795,1.00973509697646,0.552299391853796,0.646584227275248,0.355009592516614,0.10075209822764,0.508681776931463,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0.144119953416961,0.50496973370552,0.063497894292169,0,0,1.71072446022705,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.178428988797162,0.473107245101804,0.585707074963566,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,0,0,0.496215615637554,1.2276957863045,0,0,0,0.321707842287215,0,0,0.532685175939381,0,0,0.116210378459959,0.120859449591622,0,0,0.574072240823034,0,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0.660075999364704,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0.286249773483982,0,0.632758849437452,0.571890581771475,0,0,0,1.56989728039846,0,0,0,0.404364963146632,0,0,0.48763373908959,0,0,0.136499911407986,0.424216295861138,1.13008116620243,0,0,0,0,0,0.405820753925408,0.92947049429925,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0.994147647766298,0,0.556543525114529,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,1.99613798001194,0.260427761085233,0.174919999992391,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0.303747783290123,0,0,0,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0.511164065356265,0.339936274560377,0,0,0,0,0,0.704815022316672,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0.221858103073705,0,0,0,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0.300515217994437,0,0,0,0,0.464033759878494,0.398095888698616,0.400027764663154,0,0,1.26184898228651,0,0,0,0.226705925512272,0.231522474323834,0,0.895444205407437,0,0.877136198314828,0,0.38582807654183,0.168942440653073,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0.491545817507439,0,0,0.106691729694141,0,0.567515953566836,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.319267718114302,0.41023272848151,0.504143392443436,0.0691572524642179,0.161475645631851,0,0.196295437002051,0.11796972334774,0.183428598521679,0,0.762764190934334,0,0,0.225630985047772,0.20170506870352,0,0,0,0.295712172434091,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0.333694205676207,0.078493092850514,0,0.280272163313789,0,0,0.47775168788705,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.154348316215889,0,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0.332660356546013,0,0.426909383510862,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | |||
|short_description=p5@FRMD6-AS1 | |||
}} |
Revision as of 20:04, 11 January 2014
Short description: | p5@FRMD6-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FRMD6-AS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_NR_037676_5end |
EntrezGene: | FRMD6-AS1 |
HGNC: | 20129 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.11e-14 | 1 |
skin fibroblast | 1.98e-09 | 23 |
smooth muscle cell of the carotid artery | 4.69e-08 | 2 |
fibroblast | 5.80e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 4.69e-08 | 2 |
skin of body | 5.06e-08 | 41 |
mixed ectoderm/mesoderm/endoderm-derived structure | 7.52e-08 | 2 |
developing epithelial placode | 7.52e-08 | 2 |
respiratory system arterial blood vessel | 7.52e-08 | 2 |
respiratory system blood vessel | 7.52e-08 | 2 |
respiratory system artery | 7.52e-08 | 2 |
head blood vessel | 7.52e-08 | 2 |
pulmonary artery | 7.52e-08 | 2 |
pulmonary vascular system | 7.52e-08 | 2 |
pharyngeal vasculature | 7.52e-08 | 2 |
truncus arteriosus | 7.52e-08 | 2 |
aortic sac | 7.52e-08 | 2 |
pharyngeal arch artery | 7.52e-08 | 2 |
integument | 3.85e-07 | 46 |
integumental system | 3.85e-07 | 46 |