FFCP PHASE1:Hg19::chr17:39781054..39781073,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3872 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6427 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=20bp_to_ENST00000463128_5end | |||
|coexpression_cluster_id=C2041 | |||
|description=CAGE_peak_7_at_KRT17_5end | |||
|id=chr17:39781054..39781073,- | |||
|ontology_enrichment_celltype=CL:0002076!2.23e-25!43;CL:0000066!2.45e-18!254;CL:0000223!3.10e-18!59;CL:0002251!1.56e-16!21;CL:0002368!3.63e-13!13;CL:0002623!1.69e-08!3;CL:0000622!1.99e-08!5;CL:0002328!4.20e-08!3;CL:0000154!5.36e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002623;4.47e-29;3!CL:0000622;1.02e-17;5!CL:0000154;7.21e-15;6!CL:0000222;3.94e-11;1!CL:1001319;9.49e-11;1!CL:1000600;9.49e-11;1!CL:0002252;9.49e-11;1!CL:0000244;1.33e-10;4!CL:0000731;1.33e-10;4!CL:0000150;4.25e-10;9!CL:0002251;8.40e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.22e-28,3;CL:0000622,1.85e-17,5;CL:0000154,1.19e-14,6;CL:0002252,9.05e-11,1;CL:1001319,1.10e-10,1;CL:1000600,1.10e-10,1;CL:0000244,1.21e-10,4;CL:0000731,1.21e-10,4;CL:0000150,5.89e-10,9;CL:0002251,1.01e-07,20;CL:0002076,1.34e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.04e-19!14;DOID:305!2.59e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.94e-11;1!DOID:3149;3.94e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.58e-11,1;DOID:3149,4.58e-11,1;DOID:1749,9.23e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.82e-16!169;UBERON:0000925!4.82e-16!169;UBERON:0006595!4.82e-16!169;UBERON:0005631!3.66e-14!14;UBERON:0000158!3.66e-14!14;UBERON:0001004!3.09e-13!72;UBERON:0003729!4.11e-12!5;UBERON:0000161!1.68e-11!35;UBERON:0000166!1.73e-11!21;UBERON:0003343!4.17e-10!4;UBERON:0004785!4.17e-10!4;UBERON:0000165!1.36e-09!28;UBERON:0000930!1.36e-09!28;UBERON:0001007!3.43e-09!155;UBERON:0001555!3.43e-09!155;UBERON:0007026!3.43e-09!155;UBERON:0000344!7.24e-09!12;UBERON:0000365!2.64e-08!5;UBERON:0004815!4.20e-08!3;UBERON:0002031!4.20e-08!3;UBERON:0000305!4.60e-08!7;UBERON:0000065!5.09e-08!53;UBERON:0003124!1.02e-07!7;UBERON:0000077!1.07e-07!130;UBERON:0000478!2.21e-07!24;UBERON:0004923!2.29e-07!57;UBERON:0004871!5.31e-07!8;UBERON:0005910!6.74e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;8.57e-18;5!UBERON:0005910;6.25e-15;6!UBERON:0001044;7.21e-15;6!UBERON:0003293;7.21e-15;6!UBERON:0003294;7.21e-15;6!UBERON:0010047;7.21e-15;6!UBERON:0003408;7.21e-15;6!UBERON:0000167;7.21e-15;6!UBERON:0001041;4.50e-11;14!UBERON:0007029;9.49e-11;1!UBERON:0000997;9.49e-11;1!UBERON:0004645;9.49e-11;1!UBERON:0005056;9.49e-11;1!UBERON:0004176;9.49e-11;1!UBERON:0001256;9.49e-11;1!UBERON:0001259;9.49e-11;1!UBERON:0000014;1.54e-10;4!UBERON:0000486;9.97e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,8.35e-18,5;UBERON:0005910,6.12e-15,6;UBERON:0001044,1.19e-14,6;UBERON:0003293,1.19e-14,6;UBERON:0003294,1.19e-14,6;UBERON:0010047,1.19e-14,6;UBERON:0000167,1.19e-14,6;UBERON:0007029,6.77e-11,1;UBERON:0000997,7.46e-11,1;UBERON:0005056,7.46e-11,1;UBERON:0004645,1.10e-10,1;UBERON:0001256,1.10e-10,1;UBERON:0001259,1.10e-10,1;UBERON:0000014,1.40e-10,4;UBERON:0003408,5.18e-09,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.985143749731331,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,1.27612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0.670302275535787,0,0,0,3.36942951335251,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,1.19372242368845,0.296964680832639,0.921482106297696,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,8.22600091243759,0,0,0.23056390438806,0.269272933229316,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37189356380129,0.69647365264322,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,2.35694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0,2.34804281319486,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.943757786781923,0.917142992608395,0.693153996902029,0,0,0,0,0,0,0,0.327543835020193,0.739280431085226,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,0,0,0,0,0,1.03608082081518,1.0243108625637,2.76503864725637,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0,1.46301509978723,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60698544745092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0.342233301085281,0.202056159043763,0.430333232356058,0,1.22104902916462,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@KRT17 | |||
}} |
Revision as of 15:20, 20 January 2014
Short description: | p7@KRT17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_KRT17_5end |
Coexpression cluster: | C2041_cervical_immature_malignant_keratoacanthoma_salivary_nasal_epidermoid |
Association with transcript: | 20bp_to_ENST00000463128_5end |
EntrezGene: | KRT17 |
HGNC: | 6427 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.22e-28 | 3 |
acinar cell | 1.85e-17 | 5 |
protein secreting cell | 1.19e-14 | 6 |
epithelial cell of esophagus | 9.05e-11 | 1 |
bladder cell | 1.10e-10 | 1 |
lower urinary tract cell | 1.10e-10 | 1 |
transitional epithelial cell | 1.21e-10 | 4 |
urothelial cell | 1.21e-10 | 4 |
glandular epithelial cell | 5.89e-10 | 9 |
epithelial cell of alimentary canal | 1.01e-07 | 20 |
endo-epithelial cell | 1.34e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
urothelium | 8.35e-18 | 5 |
transitional epithelium | 6.12e-15 | 6 |
saliva-secreting gland | 1.19e-14 | 6 |
gland of oral region | 1.19e-14 | 6 |
gland of foregut | 1.19e-14 | 6 |
oral gland | 1.19e-14 | 6 |
oral cavity | 1.19e-14 | 6 |
surface | 6.77e-11 | 1 |
mammalian vulva | 7.46e-11 | 1 |
external female genitalia | 7.46e-11 | 1 |
urinary bladder urothelium | 1.10e-10 | 1 |
wall of urinary bladder | 1.10e-10 | 1 |
mucosa of urinary bladder | 1.10e-10 | 1 |
zone of skin | 1.40e-10 | 4 |
gland of gut | 5.18e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.58e-11 | 1 |
keratoacanthoma | 4.58e-11 | 1 |
squamous cell carcinoma | 9.23e-07 | 14 |