FFCP PHASE1:Hg19::chr17:42906965..42907004,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:42906965..42907004,- | |||
|id=chr17:42906965..42907004,- | |||
|ontology_enrichment_celltype=CL:0000055!8.69e-22!180;CL:0000057!7.32e-15!75;CL:0002620!1.58e-10!23;CL:0002321!6.64e-08!248;CL:0000133!7.32e-08!59;CL:0000220!2.04e-07!246;CL:0000222!3.51e-07!119;CL:0002319!6.61e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.49e-08;23!CL:1000746;4.49e-08;7!CL:1000612;4.49e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.79e-12,76;CL:0002620,1.71e-08,23;CL:1000746,9.22e-08,7;CL:1000612,9.22e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.50e-10!95;UBERON:0002199!6.16e-09!45;UBERON:0002416!6.16e-09!45;UBERON:0002097!5.78e-08!40;UBERON:0003064!1.59e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;4.49e-08;7!UBERON:0001229;4.49e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000080,4.38e-08,9;UBERON:0002120,4.38e-08,9;UBERON:0004875,4.38e-08,9;UBERON:0005721,4.38e-08,9;UBERON:0005754,4.38e-08,9;UBERON:0007297,4.38e-08,9;UBERON:0010532,9.22e-08,7;UBERON:0000074,9.22e-08,7;UBERON:0001229,9.22e-08,7;UBERON:0001230,9.22e-08,7;UBERON:0003220,9.22e-08,7;UBERON:0005749,9.22e-08,7;UBERON:0004199,9.22e-08,7;UBERON:0004209,9.22e-08,7;UBERON:0004198,9.22e-08,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0,0.261185628199839,0,1.39560233594486,0.218441372130172,1.05506791291381,0.247532705920093,0,0,0,0,0,1.84681587115182,3.06001036866379,0.626909442956176,1.71741592278634,1.50561867580173,0.251085279189606,0,0,0,0,0,0,0,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,0,0.795285947051099,0.486634870302636,1.70162670895322,0,0.263504357079378,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0.419499436209906,0.550236083880135,0.835979866147242,0.516833518338658,1.06729878806013,0.66944122552934,0.402829317109147,0,0.24406205754817,0,0,0.892997282840798,1.34717623575702,1.68917220724983,1.53316637465883,1.89853131913626,0.366403487860815,0,0,0,0.993943903390637,0.25326102332916,1.19168262731897,0.860509862246441,0,1.12135520028461,0,0.49333509683432,0,0.269421344139376,0.326923806226917,1.05950199351452,0.576175924479999,0.937285727335186,0.624320153660641,0.570471821544449,0.298897361103602,1.40921398372518,1.45685649931318,1.26405726032024,0.408308342509787,1.59684612505298,0,2.37600571456411,2.47266929278557,0,0,1.5150250255866,1.50142223846357,1.10825646193673,1.31693286264251,1.5324389789951,0.751190294532984,0.567160915800105,4.12596162084383,0.85422955527427,0.211931901159562,5.10154863343484,1.13357782162283,1.28820270022815,0.744467425326359,4.21940830603166,1.75386609290158,0.757301322732344,0.736399189138395,0.484938170456436,4.26011511019937,2.21654616100809,1.3564847384839,0.386521706326594,0.818238361772504,0.860413786167011,0.975789649036763,1.59035721985782,0.348581828608555,0.10366105501537,0.504641701751257,3.6497735907583,1.56449532329816,0,1.38134921352481,0.928735856063958,0,0.354920400119532,0.337169380156203,0,0,0,0,0.404493924480493,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0,1.62904152655162,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0.12624243342638,0.63497894292169,0.381988425558278,0,0,0.719792448923265,0.901029173531752,0.571652865261156,2.69114602428866,0,1.68678057388185,0.775630294546667,0,0,2.6593811658487,4.16029747645464,1.80045161983499,1.41849132023278,0.532844358032199,0.57191197463259,1.08524321078289,1.64648067356154,0,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0,0.61642896765115,0.895304816199478,0,0,0,0,2.28685161800217,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0.542530047399471,2.28767947683888,2.67643483195743,0.473107245101804,0.585707074963566,0.300946099727719,0,0,1.99267679560631,2.21243002250044,1.39013783148933,1.17480694477644,1.37257369524342,0,0,0,0.303127571446259,0,0,0,0.61384789315225,0.280660094433074,0,0.511707249066704,0,1.48418066444991,1.23367755042124,1.42049380250502,1.31403449622095,0.519254429183621,1.16210378459959,0.120859449591622,0.601519410909855,0,0.459257792658427,0.546273504020151,0.917870904715969,0.451199612907412,0.231046011313244,0.784349769176855,1.46139224653261,0.316654886678627,2.27466768141793,1.70093705276516,1.0795795805107,0,1.35473218771926,1.00337954770971,2.54876273045038,0,0.671624264166535,0,0,0.256450125116389,1.64007322849853,0.976135183992909,0.309123034943167,0.0915694648183434,0.330037999682352,0,0,0,0.096670718292122,0.924291702687866,0,1.10269257987624,0.751941714077915,0.290033387828457,0.681813019328807,0.267096106940212,0,0.192190067365106,0.127612712494584,0,0,1.25924938732256,0,0.924100740528266,0,0,0.74129687641568,0.429374660225974,0.372158369359667,0.632758849437452,1.14378116354295,0.511795582622668,1.28381696410176,0,0,1.61885211824983,0.823611089208164,0.824686816419805,0.202182481573316,0,1.26377536871694,0.975267478179181,0,0,0.545999645631943,0.848432591722276,0,0,0.66343897524122,0,0.578775534266688,0,0.608731130888112,0.30982349809975,0.563391205064483,2.43799298746888,0.294747123039363,0.35667105148125,1.41904425628239,0.211107635297664,0.987884678879706,1.13841952129715,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0.432807638929335,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0.844501632511974,0,0.552567831062295,0,0.102268682502155,0.369254416383208,0,0,0,0,1.08507746200627,0,1.11136990144637,0.969332746095218,0,3.99227596002388,0,0,0,0,0,0.236387681767936,0,0.291604613383254,3.29887490373255,0,0,0,0,0.295547618953547,0,0.10893846351899,0,1.46205491157214,0.227884111694002,0,0,0.217294743844016,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0.282706142867882,0,3.98104772431402,0.796118080530053,3.05515072466813,0,0.123563938946503,0.208843899010911,0.13480226596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| |||
|short_description=p@chr17:42906965..42907004,- | |||
}} |
Revision as of 15:42, 20 January 2014
Short description: | p@chr17:42906965..42907004, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:42906965..42907004, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.79e-12 | 76 |
skin fibroblast | 1.71e-08 | 23 |
glomerular cell | 9.22e-08 | 7 |
kidney corpuscule cell | 9.22e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mesonephros | 4.38e-08 | 9 |
pronephros | 4.38e-08 | 9 |
nephrogenic cord | 4.38e-08 | 9 |
pronephric mesoderm | 4.38e-08 | 9 |
rostral part of nephrogenic cord | 4.38e-08 | 9 |
presumptive pronephric mesoderm | 4.38e-08 | 9 |
primitive nephron | 9.22e-08 | 7 |
renal glomerulus | 9.22e-08 | 7 |
renal corpuscle | 9.22e-08 | 7 |
glomerular capsule | 9.22e-08 | 7 |
metanephric mesenchyme | 9.22e-08 | 7 |
glomerular tuft | 9.22e-08 | 7 |
S-shaped body | 9.22e-08 | 7 |
renal vesicle | 9.22e-08 | 7 |
comma-shaped body | 9.22e-08 | 7 |