FFCP PHASE1:Hg19::chr1:13840276..13840295,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126755 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27005 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VT99 | |||
|association_with_transcript=-34bp_to_NM_001010847,uc001avb.2_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_5_at_LRRC38_5end | |||
|id=chr1:13840276..13840295,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;9.81e-07;2!CL:0000242;9.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.54e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;1.66e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.57e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.70e-17!115;UBERON:0005743!1.29e-16!86;UBERON:0001017!1.80e-16!82;UBERON:0002346!1.50e-14!90;UBERON:0000073!2.46e-14!94;UBERON:0001016!2.46e-14!94;UBERON:0003075!7.76e-13!86;UBERON:0007284!7.76e-13!86;UBERON:0001049!9.55e-13!57;UBERON:0005068!9.55e-13!57;UBERON:0006241!9.55e-13!57;UBERON:0007135!9.55e-13!57;UBERON:0000955!6.69e-12!69;UBERON:0006238!6.69e-12!69;UBERON:0000924!1.19e-11!173;UBERON:0006601!1.19e-11!173;UBERON:0002616!9.28e-11!59;UBERON:0004121!2.39e-10!169;UBERON:0000153!1.84e-09!129;UBERON:0007811!1.84e-09!129;UBERON:0003076!3.39e-09!15;UBERON:0003057!3.39e-09!15;UBERON:0000033!1.64e-08!123;UBERON:0000483!8.35e-08!309;UBERON:0000119!1.28e-07!312;UBERON:0001905!7.32e-07!2;UBERON:0002757!7.32e-07!2;UBERON:0010134!7.32e-07!2;UBERON:0002784!7.32e-07!2;UBERON:0005408!7.32e-07!2;UBERON:0001899!7.32e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.38e-24;2!UBERON:0002757;6.38e-24;2!UBERON:0010134;6.38e-24;2!UBERON:0005408;6.38e-24;2!UBERON:0001899;6.38e-24;2!UBERON:0005090;6.11e-23;2!UBERON:0001630;6.11e-23;2!UBERON:0002426;1.66e-12;1!UBERON:0003831;1.66e-12;1!UBERON:0003898;1.66e-12;1!UBERON:0004830;1.66e-12;1!UBERON:0003830;1.66e-12;1!UBERON:0005175;1.66e-12;1!UBERON:0001774;1.66e-12;1!UBERON:0001103;1.66e-12;1!UBERON:0003296;1.86e-12;4!UBERON:0010133;1.86e-12;4!UBERON:0002784;1.86e-12;4!UBERON:0001389;3.26e-12;1!UBERON:0000026;3.26e-12;1!UBERON:0008784;3.26e-12;1!UBERON:0006058;3.26e-12;1!UBERON:0003663;3.26e-12;1!UBERON:0004256;3.26e-12;1!UBERON:0004708;3.26e-12;1!UBERON:0002101;3.26e-12;1!UBERON:0004709;3.26e-12;1!UBERON:0002529;3.26e-12;1!UBERON:0010538;3.26e-12;1!UBERON:0003661;3.26e-12;1!UBERON:0010890;3.26e-12;1!UBERON:0002471;3.26e-12;1!UBERON:0001383;3.26e-12;1!UBERON:0010758;3.26e-12;1!UBERON:0010707;3.26e-12;1!UBERON:0000978;3.26e-12;1!UBERON:0002103;3.26e-12;1!UBERON:0001665;3.26e-12;1!UBERON:0003823;3.26e-12;1!UBERON:0000154;3.26e-12;1!UBERON:0010709;3.26e-12;1!UBERON:0002346;4.32e-12;4!UBERON:0000923;4.32e-12;4!UBERON:0010316;4.32e-12;4!UBERON:0005291;4.32e-12;4!UBERON:0001134;2.19e-11;16!UBERON:0002036;2.19e-11;16!UBERON:0002050;7.43e-10;5!UBERON:0005423;7.43e-10;5!UBERON:0001894;1.72e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.38e-24,2;UBERON:0002757,6.38e-24,2;UBERON:0010134,6.38e-24,2;UBERON:0005408,6.38e-24,2;UBERON:0001899,6.38e-24,2;UBERON:0005090,6.84e-23,2;UBERON:0001630,6.84e-23,2;UBERON:0002426,1.75e-12,1;UBERON:0003831,1.75e-12,1;UBERON:0003898,1.75e-12,1;UBERON:0004830,1.75e-12,1;UBERON:0003830,1.75e-12,1;UBERON:0005175,1.75e-12,1;UBERON:0001774,1.75e-12,1;UBERON:0001103,1.75e-12,1;UBERON:0010084,1.75e-12,1;UBERON:0003296,1.86e-12,4;UBERON:0010133,1.86e-12,4;UBERON:0002784,1.86e-12,4;UBERON:0005418,3.45e-12,1;UBERON:0001389,3.45e-12,1;UBERON:0000026,3.45e-12,1;UBERON:0008784,3.45e-12,1;UBERON:0006058,3.45e-12,1;UBERON:0003663,3.45e-12,1;UBERON:0004256,3.45e-12,1;UBERON:0004708,3.45e-12,1;UBERON:0002101,3.45e-12,1;UBERON:0004709,3.45e-12,1;UBERON:0002529,3.45e-12,1;UBERON:0010538,3.45e-12,1;UBERON:0003661,3.45e-12,1;UBERON:0010890,3.45e-12,1;UBERON:0002471,3.45e-12,1;UBERON:0001383,3.45e-12,1;UBERON:0004357,3.45e-12,1;UBERON:0004347,3.45e-12,1;UBERON:0005420,3.45e-12,1;UBERON:0005732,3.45e-12,1;UBERON:0010758,3.45e-12,1;UBERON:0010707,3.45e-12,1;UBERON:0000978,3.45e-12,1;UBERON:0002103,3.45e-12,1;UBERON:0001665,3.45e-12,1;UBERON:0003823,3.45e-12,1;UBERON:0000154,3.45e-12,1;UBERON:0010709,3.45e-12,1;UBERON:0005733,3.45e-12,1;UBERON:0005730,3.45e-12,1;UBERON:0001894,1.72e-07,7;UBERON:0006222,1.72e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99031692572366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.110579259931225,0.886642856860642,0.658156191461918,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,4.01288823649394,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0.321506296930038,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,7.60917492149269,0,0,0,0,1.40500471742064,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2754495206101,0,0,0,0.23658523500376,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,4.42184177277261,0,0.202612753855184,0.781078098613847,0,0.19024743058172,0,0,0.496211178389294,7.73833475182331,0,10.7140367175657,18.8318884442541,0,0,0,0,0,0,0.131545547125698,0,0.667388411352415,0,0,0,0,0,0,0.0714765441766563,5.21444918717998,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,1.29485767437579,5.2358031496686,5.799072156691,0.971421986118279,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.785233868459781,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,1.89325874631822,0.203974470572744,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.227336094654718,0,0,0,0.639701945702943,0.476128862927481,0,0,0.448527450322454,0,0,0.653150243690884,2.05339980651169,0.0673520530145875,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p5@LRRC38 | |||
}} |
Revision as of 16:26, 10 January 2014
Short description: | p5@LRRC38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LRRC38_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -34bp_to_NM_001010847, uc001avb.2_5end |
EntrezGene: | LRRC38 |
HGNC: | 27005 |
UniProt: | Q5VT99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.57e-12 | 1 |