FFCP PHASE1:Hg19::chr1:86045923..86045935,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:86045923..86045935,+ | |||
|id=chr1:86045923..86045935,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.44e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0000307;4.76e-11;3!CL:0000222;3.86e-09;1!CL:1001319;3.86e-09;1!CL:1000600;3.86e-09;1!CL:0002581;1.09e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.43e-11,3;CL:0000069,4.43e-11,3;CL:0000307,4.43e-11,3;CL:0000377,4.43e-11,3;CL:1001319,3.58e-09,1;CL:1000600,3.58e-09,1;CL:0002581,7.18e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000377;4.76e-11;3!UBERON:0009847;9.33e-11;3!UBERON:0003353;9.33e-11;3!UBERON:0007123;8.65e-07;5 | |||
|ontology_enrichment_disease=DOID:0050687!7.49e-22!143;DOID:14566!9.73e-21!239;DOID:162!1.95e-20!235;DOID:305!1.16e-16!106;DOID:7!6.45e-07!39;DOID:299!9.14e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.04e-08;14!DOID:3111;1.09e-08;1!DOID:3112;1.09e-08;1!DOID:3603;1.09e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.47e-10,143;DOID:1749,9.74e-09,14;DOID:3112,1.05e-08,1;DOID:3111,1.53e-08,1;DOID:3603,1.53e-08,1;DOID:305,6.70e-08,106;DOID:162,9.01e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.86e-09;1!UBERON:0001256;3.86e-09;1!UBERON:0001259;3.86e-09;1!UBERON:0007195;1.09e-08;1!UBERON:0004913;1.09e-08;1!UBERON:0003703;1.09e-08;1!UBERON:0001174;1.09e-08;1!UBERON:0004914;1.09e-08;1!UBERON:0002046;8.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.58e-09,1;UBERON:0001256,3.58e-09,1;UBERON:0001259,3.58e-09,1;UBERON:0007195,1.22e-08,1;UBERON:0004913,1.91e-08,1;UBERON:0003703,1.91e-08,1;UBERON:0001174,1.91e-08,1;UBERON:0004914,1.91e-08,1;UBERON:0002046,7.48e-07,5;UBERON:0004117,7.48e-07,5;UBERON:0007689,7.48e-07,5;UBERON:0007123,7.48e-07,5;UBERON:0003091,7.48e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0.684372125364421,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0.276149695926898,0,0.710019185033229,0,0,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.110293972732394,0.435758888184812,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.283550194484773,0.447792613514241,0.290633938513962,0.383382679165211,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0.247528499761764,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.06824071127473,0,0.245040215981032,0,0,0,0.318852545457645,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970884173996107,0,0.568272293612826,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0,0,0,1.11136990144637,0,0,0,0.260427761085233,0.699679999969566,0,1.0241410345695,0.762760950878299,0,0,0.291604613383254,0,0.885741385813839,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,0.455768223388005,0,0.0897576444097721,0,0,0.183195186803725,0.533034776018635,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,1.13852239634511,0.158936578980379,2.95397290339238,0.326465616318295,0.706765357169704,0,0,0,0,0.593042257361244,0,0.104421949505455,0.067401132980677,0,0,0,0.586993856796269,0.242780379534093,0,0,0,0,0.300646838828985,0,0,0,0.313932918407225,1.19472429772959,0.284609546029793,0.138674673013139,0.173559738335131,0.293977192243133,1.65412492502765,0,0.343972064943233,0.0967563312890851,0.219267951258557,0.246346371159628,0,0,0,1.09633539717401,0.596143835108969,0,0,0.480952921509202,0,0.19980960958213,0.144090417154106,0.343609788497747,0,0.432164393964449,0.372757606696298,0,0.67952103036807,0.313808538937,0.407992870545287,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,1.05600336519407,0,0.575745591958336,0,0,0.5085370753095,0,0,0,2.39460383124975,0.492555124496034,0,0.113312091520126,0,0,0.387848869084652,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0.314108192500469,0,0.488105059607853,0,0.573409195690071,0,0.124192805882767,0.138348634936231,2.74956897516635,1.21319294033318,0,0.470531639396343,0,0.144921028610825,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,2.52369796457302,0,0.428883182749851,0.260994291965212,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0,0,0.337884881306145,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0,1.05656061679314,0,0,0,0,0.552317850755522,0,0,0,0,0.314531883711793,0.218419276384028,0.169732529954025,0.425149840203366,0,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0.550285795565037,1.5018336599544,0,0.690359926060101,0,0,0.20170506870352,0,0,1.14640342257068,1.03499260351932,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0.342976018874837,0,0,1.53651993149159,1.00108261702862,0,0.157115589916002,0.560544326627578,0,0.431855182437243,0,0,0,0.348724276104376,1.04314963381548,0,0,0,0,0,0.473328002922261,0.340853619036631,0,0.4582137370881,0.31020638566432,0,0,0.687051635306701,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0.109940516745429,0,0,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0.0644578879735772,0.0999411559249289,0.535661815816973,2.11736923029415,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.655593431782173,0.506794004045748,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0,1.34558235096736,0,0,0,0,0,0,0,2.68630786416216,0.106727345877715,1.9307228228694,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p@chr1:86045923..86045935,+ | |||
}} |
Revision as of 19:21, 10 January 2014
Short description: | p@chr1:86045923..86045935, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:86045923..86045935, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.43e-11 | 3 |
branched duct epithelial cell | 4.43e-11 | 3 |
tracheal epithelial cell | 4.43e-11 | 3 |
tracheoblast | 4.43e-11 | 3 |
bladder cell | 3.58e-09 | 1 |
lower urinary tract cell | 3.58e-09 | 1 |
perirenal preadipocyte | 7.18e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 3.58e-09 | 1 |
wall of urinary bladder | 3.58e-09 | 1 |
mucosa of urinary bladder | 3.58e-09 | 1 |
stroma of bone marrow | 1.22e-08 | 1 |
hepatopancreatic ampulla | 1.91e-08 | 1 |
extrahepatic bile duct | 1.91e-08 | 1 |
common bile duct | 1.91e-08 | 1 |
duodenal papilla | 1.91e-08 | 1 |
thyroid gland | 7.48e-07 | 5 |
pharyngeal pouch | 7.48e-07 | 5 |
thyroid diverticulum | 7.48e-07 | 5 |
pharyngeal pouch 2 | 7.48e-07 | 5 |
thyroid primordium | 7.48e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.47e-10 | 143 |
squamous cell carcinoma | 9.74e-09 | 14 |
papillary adenocarcinoma | 1.05e-08 | 1 |
cystadenocarcinoma | 1.53e-08 | 1 |
mucinous cystadenocarcinoma | 1.53e-08 | 1 |
carcinoma | 6.70e-08 | 106 |
cancer | 9.01e-07 | 235 |