FFCP PHASE1:Hg19::chr2:128180820..128180831,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5624 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9451 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-32bp_to_ENST00000464089_5end | |||
|description=CAGE_peak_5_at_PROC_5end | |||
|id=chr2:128180820..128180831,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.18e-18!254;CL:0002076!3.05e-11!43;CL:0000223!7.67e-10!59;CL:0002251!1.47e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0002553;5.37e-13;1!CL:1000746;1.06e-07;7!CL:1000612;1.06e-07;7!CL:0000650;3.92e-07;2!CL:1000500;3.92e-07;2!CL:1000618;3.92e-07;2!CL:1001318;3.92e-07;2!CL:0002173;3.92e-07;2!CL:0002535;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,4.77e-13,1;CL:1000746,1.33e-07,7;CL:1000612,1.33e-07,7;CL:0000066,3.35e-07,253;CL:0002535,5.28e-07,2;CL:0000650,5.60e-07,2;CL:1000500,5.60e-07,2;CL:1000618,5.60e-07,2;CL:1001318,5.60e-07,2;CL:0002173,5.60e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.85e-17!106;DOID:0050687!6.65e-12!143;DOID:162!7.14e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3151;5.37e-13;1!DOID:3149;5.37e-13;1!DOID:3119;3.59e-08;14!DOID:3451;3.92e-07;2!DOID:4159;3.92e-07;2!DOID:0060122;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.33e-13,1;DOID:3149,3.33e-13,1;DOID:305,8.70e-10,106;DOID:3119,3.87e-08,14;DOID:3451,3.09e-07,2;DOID:4159,3.09e-07,2;DOID:0060122,3.09e-07,2;DOID:0050687,6.52e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.07e-09!169;UBERON:0000925!1.07e-09!169;UBERON:0006595!1.07e-09!169;UBERON:0004807!4.03e-09!28;UBERON:0001007!4.64e-09!155;UBERON:0001555!4.64e-09!155;UBERON:0007026!4.64e-09!155;UBERON:0004921!6.81e-09!129;UBERON:0004185!6.81e-09!129;UBERON:0000064!2.17e-08!219;UBERON:0005911!2.77e-08!82;UBERON:0000077!3.18e-08!130;UBERON:0000072!2.43e-07!46;UBERON:0001041!6.79e-07!98;UBERON:0001004!9.63e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;2.84e-10;5!UBERON:0010039;2.84e-10;5!UBERON:0000074;1.06e-07;7!UBERON:0001229;1.06e-07;7!UBERON:0006562;3.92e-07;2!UBERON:0003567;3.92e-07;2!UBERON:0003838;3.92e-07;2!UBERON:0003586;3.92e-07;2!UBERON:0006955;3.92e-07;2!UBERON:0005169;3.92e-07;2!UBERON:0002321;3.92e-07;2!UBERON:0004801;3.92e-07;2!UBERON:0005215;3.92e-07;2!UBERON:0002303;3.92e-07;2!UBERON:0002319;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,1.33e-07,7;UBERON:0000074,1.33e-07,7;UBERON:0001229,1.33e-07,7;UBERON:0001230,1.33e-07,7;UBERON:0003220,1.33e-07,7;UBERON:0005749,1.33e-07,7;UBERON:0004199,1.33e-07,7;UBERON:0004209,1.33e-07,7;UBERON:0004198,1.33e-07,7;UBERON:0006955,5.28e-07,2;UBERON:0004801,5.28e-07,2;UBERON:0003567,5.60e-07,2;UBERON:0003838,5.60e-07,2;UBERON:0003586,5.60e-07,2;UBERON:0005169,5.60e-07,2;UBERON:0002321,5.60e-07,2;UBERON:0005215,5.60e-07,2;UBERON:0002303,5.60e-07,2;UBERON:0002319,5.60e-07,2;UBERON:0005103,9.38e-07,8;UBERON:0000083,9.38e-07,8;UBERON:0009201,9.38e-07,8;UBERON:0006553,9.38e-07,8;UBERON:0003074,9.38e-07,8;UBERON:0003060,9.38e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.09340350391728,0.655324116390517,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66943437013739,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.773043412653187,0.818238361772504,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.445893486866185,0,0.839910640994298,0.567100388969546,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,1.00337954770971,0,0.831076008928724,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,1.22520107990516,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0.140669416410513,0,0,0,0,0,1.0077309914171,0.102268682502155,0,0,0.269605053441981,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.568967241427498,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0.599428828746391,1.44090417154106,0,1.54435498075768,0,0,0.471388069233591,0,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0.795229689809303,0.408610218334727,0,0,0.415440338029185,0.2249738915515,0,0.0607495566580247,1.67717343799633,0.157611414598396,0.262272940674991,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.684347351537318,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,1.54400723580486,0,0,0,0.337884881306145,0,0,0.607719912354764,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,1.65085738669511,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,1.91643641459393,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,1.86123831398592,0,0,0.098150233615243,0.731507549893617,0,0,0,0.485710993059139,0.467878926924211,0,0,0,0.109940516745429,0.452888530700021,0.308696632431779,0,3.76253837089218,0,0.235676547101626,0,0,0,0,0,0,0,0.535661815816973,0,0.160482733378337,1.46067277649303,0,0,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.129177819672012,0.31037357147929,0.112131862580613,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.325613074443898,0,0,0.449126010532934,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@PROC | |||
}} |
Revision as of 05:19, 21 January 2014
Short description: | p5@PROC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PROC_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000464089_5end |
EntrezGene: | PROC |
HGNC: | 9451 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 4.77e-13 | 1 |
glomerular cell | 1.33e-07 | 7 |
kidney corpuscule cell | 1.33e-07 | 7 |
epithelial cell | 3.35e-07 | 253 |
epithelial cell of cervix | 5.28e-07 | 2 |
mesangial cell | 5.60e-07 | 2 |
kidney interstitial cell | 5.60e-07 | 2 |
juxtaglomerular complex cell | 5.60e-07 | 2 |
renal interstitial pericyte | 5.60e-07 | 2 |
extraglomerular mesangial cell | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 1.33e-07 | 7 |
renal glomerulus | 1.33e-07 | 7 |
renal corpuscle | 1.33e-07 | 7 |
glomerular capsule | 1.33e-07 | 7 |
metanephric mesenchyme | 1.33e-07 | 7 |
glomerular tuft | 1.33e-07 | 7 |
S-shaped body | 1.33e-07 | 7 |
renal vesicle | 1.33e-07 | 7 |
comma-shaped body | 1.33e-07 | 7 |
uterine epithelium | 5.28e-07 | 2 |
cervix epithelium | 5.28e-07 | 2 |
abdomen connective tissue | 5.60e-07 | 2 |
abdominal segment connective tissue | 5.60e-07 | 2 |
trunk connective tissue | 5.60e-07 | 2 |
interstitial tissue | 5.60e-07 | 2 |
extraglomerular mesangium | 5.60e-07 | 2 |
kidney interstitium | 5.60e-07 | 2 |
juxtaglomerular apparatus | 5.60e-07 | 2 |
mesangium | 5.60e-07 | 2 |
mesonephric epithelium | 9.38e-07 | 8 |
mesonephric tubule | 9.38e-07 | 8 |
nephric duct | 9.38e-07 | 8 |
renal duct | 9.38e-07 | 8 |
mesonephric duct | 9.38e-07 | 8 |
pronephric duct | 9.38e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.33e-13 | 1 |
keratoacanthoma | 3.33e-13 | 1 |
carcinoma | 8.70e-10 | 106 |
gastrointestinal system cancer | 3.87e-08 | 14 |
skin carcinoma | 3.09e-07 | 2 |
skin cancer | 3.09e-07 | 2 |
integumentary system cancer | 3.09e-07 | 2 |
cell type cancer | 6.52e-07 | 143 |