FFCP PHASE1:Mm9::chr11:74985973..74985980,+: Difference between revisions
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{{FFCP|EntrezGene=387150|HGNC=|MCL_coexpression_id=7|UniProt=|association_with_transcript=0bp_to_uc007kde.2_5end|description=CAGE_peak_2_at_Mir132_5end|id=chr11:74985973..74985980,+|ontology_enrichment_celltype=CL:0000540!6.15e-07!33;CL:0000047!6.15e-07!33;CL:0000031!6.15e-07!33;CL:0000404!6.15e-07!33;CL:0000117!8.34e-07!23;CL:0000337!8.34e-07!23|ontology_enrichment_celltype_v019_2=CL:0000624,4.37e-08,8;CL:0000213,2.05e-07,1;CL:0002078,2.05e-07,1;CL:0000115,2.05e-07,1;CL:0002262,2.05e-07,1;CL:1000398,2.05e-07,1;CL:0000791,3.07e-07,9;CL:0000789,3.07e-07,9;CL:0002420,3.07e-07,9;CL:0002419,3.07e-07,9;CL:0000790,3.07e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.48e-13!75;UBERON:0001016!4.48e-13!75;UBERON:0001017!9.77e-13!73;UBERON:0005743!9.77e-13!73;UBERON:0000955!3.47e-11!50;UBERON:0006238!3.47e-11!50;UBERON:0002020!4.06e-11!34;UBERON:0001049!6.00e-11!52;UBERON:0005068!6.00e-11!52;UBERON:0006241!6.00e-11!52;UBERON:0007135!6.00e-11!52;UBERON:0003080!6.24e-11!40;UBERON:0002346!1.49e-10!71;UBERON:0003075!1.49e-10!71;UBERON:0007284!1.49e-10!71;UBERON:0002616!1.72e-10!49;UBERON:0003056!2.25e-10!49;UBERON:0002780!2.96e-10!39;UBERON:0001890!2.96e-10!39;UBERON:0006240!2.96e-10!39;UBERON:0004121!3.73e-10!102;UBERON:0000924!3.73e-10!102;UBERON:0006601!3.73e-10!102;UBERON:0000033!6.39e-10!63;UBERON:0002791!1.45e-09!29;UBERON:0003528!1.45e-09!29;UBERON:0001893!1.45e-09!29;UBERON:0002021!4.69e-08!10;UBERON:0000411!4.69e-08!10;UBERON:0001950!4.69e-08!10;UBERON:0007811!1.86e-07!86;UBERON:0000956!2.31e-07!21;UBERON:0001869!2.31e-07!21;UBERON:0000203!2.31e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.33e-22,10;UBERON:0000411,2.33e-22,10;UBERON:0001950,2.33e-22,10;UBERON:0000956,4.52e-14,21;UBERON:0001869,4.52e-14,21;UBERON:0000203,4.52e-14,21;UBERON:0002619,4.68e-13,17;UBERON:0003528,4.81e-10,29;UBERON:0002791,4.81e-10,29;UBERON:0001893,4.81e-10,29;UBERON:0000955,7.55e-10,47;UBERON:0006238,7.55e-10,47;UBERON:0002020,1.75e-08,34;UBERON:0002616,6.10e-08,46;UBERON:0001017,1.85e-07,73;UBERON:0002394,2.05e-07,1;UBERON:0001281,2.05e-07,1;UBERON:0000353,2.05e-07,1;UBERON:0003497,2.05e-07,1;UBERON:0003909,2.05e-07,1;UBERON:0003928,2.05e-07,1;UBERON:0003835,2.05e-07,1;UBERON:0003513,2.05e-07,1;UBERON:0001280,2.05e-07,1;UBERON:0004647,2.05e-07,1;UBERON:0002294,2.05e-07,1;UBERON:0001173,2.05e-07,1;UBERON:0004912,2.05e-07,1;UBERON:0005171,2.05e-07,1;UBERON:0002780,2.55e-07,39;UBERON:0001890,2.55e-07,39;UBERON:0006240,2.55e-07,39;UBERON:0001016,3.14e-07,75;UBERON:0003080,4.02e-07,40;UBERON:0001049,6.25e-07,52;UBERON:0005068,6.25e-07,52;UBERON:0006241,6.25e-07,52;UBERON:0007135,6.25e-07,52|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,2.67498572088167,5.14941957908386,0.856089841127525,0.159544317990673,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.336093799142464,0.257259436035947,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0.889294796111139,0.449949858640699,0,0,0,0,0.207379224616955,0.270011876663381,0,0.285650984403804,0,0,0.287536413054709,0,0,0.510749352340751,0.614426133024974,0,0.274462930807229,0.52091337055676,0.837548997004143,0.56276261003168,0.61119299110724,0.883885756421003,0.284743361598206,0.372798891650601,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,0,1.17112318804619,0,0,0.11981512450592,0,0.127070227073065,0.898743836428936,0,0.376963056338593,1.04294592115366,0.511430914660661,0,0.162241263067758,0.101839363850316,0,0,0.631325567659422,0,0.459804208866946,0,0,0,0.12811372028485,0,0.517406741478031,0,0.189106080167819,0,0,0,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.162137619091711,0.584799949701329,0.439100230582101,0,0.630869845692382,0.514523061896422,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0,0,0.809621403349789,0,0.395287777946524,1.28528526568723,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0.713475270408282,0.329098041204242,0.913394847343798,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.419854356970974,0.967399816630967,0,0,0.203319467126849,0,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0,0,0.576060012515731,0.632022241256357,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.179427713218951,0,0.19318959403219,0,0,0,0,0,0.920650473014354,1.14579102687879,1.3748254587495,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,0.906284817968409,1.03552062350364,0,0.399024873401031,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.280924522409647,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p2@Mir132}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:387150 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc007kde.2_5end | |||
|cluster_id=chr11:74985973..74985980,+ | |||
|description=CAGE_peak_2_at_Mir132_5end | |||
|id=chr11:74985973..74985980,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.15e-07!33;CL:0000047!6.15e-07!33;CL:0000031!6.15e-07!33;CL:0000404!6.15e-07!33;CL:0000117!8.34e-07!23;CL:0000337!8.34e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.37e-08,8;CL:0000213,2.05e-07,1;CL:0002078,2.05e-07,1;CL:0000115,2.05e-07,1;CL:0002262,2.05e-07,1;CL:1000398,2.05e-07,1;CL:0000791,3.07e-07,9;CL:0000789,3.07e-07,9;CL:0002420,3.07e-07,9;CL:0002419,3.07e-07,9;CL:0000790,3.07e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.48e-13!75;UBERON:0001016!4.48e-13!75;UBERON:0001017!9.77e-13!73;UBERON:0005743!9.77e-13!73;UBERON:0000955!3.47e-11!50;UBERON:0006238!3.47e-11!50;UBERON:0002020!4.06e-11!34;UBERON:0001049!6.00e-11!52;UBERON:0005068!6.00e-11!52;UBERON:0006241!6.00e-11!52;UBERON:0007135!6.00e-11!52;UBERON:0003080!6.24e-11!40;UBERON:0002346!1.49e-10!71;UBERON:0003075!1.49e-10!71;UBERON:0007284!1.49e-10!71;UBERON:0002616!1.72e-10!49;UBERON:0003056!2.25e-10!49;UBERON:0002780!2.96e-10!39;UBERON:0001890!2.96e-10!39;UBERON:0006240!2.96e-10!39;UBERON:0004121!3.73e-10!102;UBERON:0000924!3.73e-10!102;UBERON:0006601!3.73e-10!102;UBERON:0000033!6.39e-10!63;UBERON:0002791!1.45e-09!29;UBERON:0003528!1.45e-09!29;UBERON:0001893!1.45e-09!29;UBERON:0002021!4.69e-08!10;UBERON:0000411!4.69e-08!10;UBERON:0001950!4.69e-08!10;UBERON:0007811!1.86e-07!86;UBERON:0000956!2.31e-07!21;UBERON:0001869!2.31e-07!21;UBERON:0000203!2.31e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.33e-22,10;UBERON:0000411,2.33e-22,10;UBERON:0001950,2.33e-22,10;UBERON:0000956,4.52e-14,21;UBERON:0001869,4.52e-14,21;UBERON:0000203,4.52e-14,21;UBERON:0002619,4.68e-13,17;UBERON:0003528,4.81e-10,29;UBERON:0002791,4.81e-10,29;UBERON:0001893,4.81e-10,29;UBERON:0000955,7.55e-10,47;UBERON:0006238,7.55e-10,47;UBERON:0002020,1.75e-08,34;UBERON:0002616,6.10e-08,46;UBERON:0001017,1.85e-07,73;UBERON:0002394,2.05e-07,1;UBERON:0001281,2.05e-07,1;UBERON:0000353,2.05e-07,1;UBERON:0003497,2.05e-07,1;UBERON:0003909,2.05e-07,1;UBERON:0003928,2.05e-07,1;UBERON:0003835,2.05e-07,1;UBERON:0003513,2.05e-07,1;UBERON:0001280,2.05e-07,1;UBERON:0004647,2.05e-07,1;UBERON:0002294,2.05e-07,1;UBERON:0001173,2.05e-07,1;UBERON:0004912,2.05e-07,1;UBERON:0005171,2.05e-07,1;UBERON:0002780,2.55e-07,39;UBERON:0001890,2.55e-07,39;UBERON:0006240,2.55e-07,39;UBERON:0001016,3.14e-07,75;UBERON:0003080,4.02e-07,40;UBERON:0001049,6.25e-07,52;UBERON:0005068,6.25e-07,52;UBERON:0006241,6.25e-07,52;UBERON:0007135,6.25e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,2.67498572088167,5.14941957908386,0.856089841127525,0.159544317990673,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.336093799142464,0.257259436035947,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0.889294796111139,0.449949858640699,0,0,0,0,0.207379224616955,0.270011876663381,0,0.285650984403804,0,0,0.287536413054709,0,0,0.510749352340751,0.614426133024974,0,0.274462930807229,0.52091337055676,0.837548997004143,0.56276261003168,0.61119299110724,0.883885756421003,0.284743361598206,0.372798891650601,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,0,1.17112318804619,0,0,0.11981512450592,0,0.127070227073065,0.898743836428936,0,0.376963056338593,1.04294592115366,0.511430914660661,0,0.162241263067758,0.101839363850316,0,0,0.631325567659422,0,0.459804208866946,0,0,0,0.12811372028485,0,0.517406741478031,0,0.189106080167819,0,0,0,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.162137619091711,0.584799949701329,0.439100230582101,0,0.630869845692382,0.514523061896422,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0,0,0.809621403349789,0,0.395287777946524,1.28528526568723,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0.713475270408282,0.329098041204242,0.913394847343798,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.419854356970974,0.967399816630967,0,0,0.203319467126849,0,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0,0,0.576060012515731,0.632022241256357,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.179427713218951,0,0.19318959403219,0,0,0,0,0,0.920650473014354,1.14579102687879,1.3748254587495,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,0.906284817968409,1.03552062350364,0,0.399024873401031,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.280924522409647,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p2@Mir132 | |||
}} |
Revision as of 23:06, 3 August 2015
Short description: | p2@Mir132 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mir132_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_uc007kde.2_5end |
EntrezGene: | 387150 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.37e-08 | 8 |
lining cell | 2.05e-07 | 1 |
meso-epithelial cell | 2.05e-07 | 1 |
endothelial cell | 2.05e-07 | 1 |
endothelial cell of sinusoid | 2.05e-07 | 1 |
endothelial cell of hepatic sinusoid | 2.05e-07 | 1 |
mature alpha-beta T cell | 3.07e-07 | 9 |
alpha-beta T cell | 3.07e-07 | 9 |
immature T cell | 3.07e-07 | 9 |
mature T cell | 3.07e-07 | 9 |
immature alpha-beta T cell | 3.07e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.33e-22 | 10 |
visual cortex | 2.33e-22 | 10 |
neocortex | 2.33e-22 | 10 |
cerebral cortex | 4.52e-14 | 21 |
cerebral hemisphere | 4.52e-14 | 21 |
pallium | 4.52e-14 | 21 |
regional part of cerebral cortex | 4.68e-13 | 17 |
brain grey matter | 4.81e-10 | 29 |
regional part of telencephalon | 4.81e-10 | 29 |
telencephalon | 4.81e-10 | 29 |
brain | 7.55e-10 | 47 |
future brain | 7.55e-10 | 47 |
gray matter | 1.75e-08 | 34 |
regional part of brain | 6.10e-08 | 46 |
central nervous system | 1.85e-07 | 73 |
bile duct | 2.05e-07 | 1 |
hepatic sinusoid | 2.05e-07 | 1 |
parenchyma | 2.05e-07 | 1 |
abdomen blood vessel | 2.05e-07 | 1 |
sinusoid | 2.05e-07 | 1 |
digestive system duct | 2.05e-07 | 1 |
abdominal segment blood vessel | 2.05e-07 | 1 |
trunk blood vessel | 2.05e-07 | 1 |
liver parenchyma | 2.05e-07 | 1 |
liver lobule | 2.05e-07 | 1 |
biliary system | 2.05e-07 | 1 |
biliary tree | 2.05e-07 | 1 |
biliary bud | 2.05e-07 | 1 |
hepatic duct | 2.05e-07 | 1 |
regional part of forebrain | 2.55e-07 | 39 |
forebrain | 2.55e-07 | 39 |
future forebrain | 2.55e-07 | 39 |
nervous system | 3.14e-07 | 75 |
anterior neural tube | 4.02e-07 | 40 |
neural tube | 6.25e-07 | 52 |
neural rod | 6.25e-07 | 52 |
future spinal cord | 6.25e-07 | 52 |
neural keel | 6.25e-07 | 52 |