FFCP PHASE1:Mm9::chr11:93905438..93905450,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=70834|HGNC=|MCL_coexpression_id=1|UniProt=Q5NC72|association_with_transcript=6bp_to_ENSMUST00000132079_5end|description=CAGE_peak_7_at_Spag9_5end|id=chr11:93905438..93905450,+|ontology_enrichment_celltype=CL:0000540!1.54e-10!33;CL:0000047!1.54e-10!33;CL:0000031!1.54e-10!33;CL:0000404!1.54e-10!33;CL:0000117!3.23e-10!23;CL:0000337!3.23e-10!23;CL:0000221!1.32e-07!44;CL:0000133!1.32e-07!44;CL:0000393!1.37e-07!39;CL:0000211!1.37e-07!39;CL:0002319!3.64e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.57e-13,23;CL:0000337,3.57e-13,23;CL:0000540,1.89e-09,33;CL:0000047,1.89e-09,33;CL:0000031,1.89e-09,33;CL:0000404,1.89e-09,33;CL:0000393,1.80e-07,39;CL:0000211,1.80e-07,39;CL:0002610,2.34e-07,3;CL:0000221,3.05e-07,44;CL:0000133,3.05e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.92e-25!71;UBERON:0003075!2.92e-25!71;UBERON:0007284!2.92e-25!71;UBERON:0004121!3.57e-25!102;UBERON:0000924!3.57e-25!102;UBERON:0006601!3.57e-25!102;UBERON:0001017!1.30e-22!73;UBERON:0005743!1.30e-22!73;UBERON:0000073!1.38e-22!75;UBERON:0001016!1.38e-22!75;UBERON:0000033!1.68e-21!63;UBERON:0001049!1.16e-19!52;UBERON:0005068!1.16e-19!52;UBERON:0006241!1.16e-19!52;UBERON:0007135!1.16e-19!52;UBERON:0000955!5.18e-19!50;UBERON:0006238!5.18e-19!50;UBERON:0002616!2.42e-18!49;UBERON:0003056!3.14e-17!49;UBERON:0003080!2.12e-14!40;UBERON:0002020!3.37e-14!34;UBERON:0002780!1.11e-13!39;UBERON:0001890!1.11e-13!39;UBERON:0006240!1.11e-13!39;UBERON:0002791!1.34e-11!29;UBERON:0003528!1.34e-11!29;UBERON:0001893!1.34e-11!29;UBERON:0000153!6.08e-11!94;UBERON:0007811!1.38e-10!86;UBERON:0002021!7.29e-08!10;UBERON:0000411!7.29e-08!10;UBERON:0001950!7.29e-08!10;UBERON:0000956!3.23e-07!21;UBERON:0001869!3.23e-07!21;UBERON:0000203!3.23e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.37e-36,54;UBERON:0001017,1.93e-33,73;UBERON:0001016,2.67e-32,75;UBERON:0001049,2.87e-32,52;UBERON:0005068,2.87e-32,52;UBERON:0006241,2.87e-32,52;UBERON:0007135,2.87e-32,52;UBERON:0002346,8.23e-32,64;UBERON:0003075,8.23e-32,64;UBERON:0007284,8.23e-32,64;UBERON:0004121,1.42e-29,95;UBERON:0000924,1.42e-29,95;UBERON:0006601,1.42e-29,95;UBERON:0000955,2.85e-29,47;UBERON:0006238,2.85e-29,47;UBERON:0010371,1.42e-28,73;UBERON:0002616,1.00e-27,46;UBERON:0010314,1.36e-23,92;UBERON:0003080,5.87e-23,40;UBERON:0002020,9.80e-23,34;UBERON:0003056,1.51e-22,49;UBERON:0002780,2.62e-21,39;UBERON:0001890,2.62e-21,39;UBERON:0006240,2.62e-21,39;UBERON:0003528,3.22e-20,29;UBERON:0002791,3.22e-20,29;UBERON:0001893,3.22e-20,29;UBERON:0002021,1.88e-18,10;UBERON:0000411,1.88e-18,10;UBERON:0001950,1.88e-18,10;UBERON:0002619,3.86e-12,17;UBERON:0000956,2.11e-11,21;UBERON:0001869,2.11e-11,21;UBERON:0000203,2.11e-11,21;UBERON:0000025,3.53e-11,114;UBERON:0002420,7.57e-11,8;UBERON:0007245,7.57e-11,8;UBERON:0010009,7.57e-11,8;UBERON:0010011,7.57e-11,8;UBERON:0000454,7.57e-11,8;UBERON:0004111,8.64e-11,122;UBERON:0003076,1.34e-09,12;UBERON:0003057,1.34e-09,12;UBERON:0002950,9.90e-09,4;UBERON:0001891,9.90e-09,4;UBERON:0009616,9.90e-09,4;UBERON:0010286,9.90e-09,4;UBERON:0000483,1.82e-07,174;UBERON:0011216,1.96e-07,194;UBERON:0004684,2.34e-07,3;UBERON:0002275,2.34e-07,3;UBERON:0000119,2.78e-07,176|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0.286533439938757,0,0.404632921719196,1.05798195854407,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0.630974884054146,0.856952953211411,0.662605622854841,0.367472397644862,0.287536413054709,0,5.50579404996943,5.2351808614927,7.0659005297872,1.45074916503213,1.28082701043374,1.04182674111352,2.23346399201105,5.6276261003168,2.29197371665215,2.06240009831567,2.56269025438385,1.1183966749518,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.346970653532272,1.21786191324856,0,0.452167921657868,0.823120949949934,0.251333182659351,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,3.80615036115011,2.51336048176146,0,0,0,0,6.44099749440738,4.11750542536764,0.753926112677186,5.73620256634512,8.18289463457058,4.36354893575076,5.353961681236,0.203678727700633,0.124406970610093,0.252722758433675,0.841767423545896,0.520481771850815,0.229902104433473,0.540186389416048,0.150704817835715,1.2246569847239,1.0249097622788,0.749613796477831,1.03481348295606,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.590292695242212,0.154267112887378,0.465067889500816,0.268273401399619,1.05088808130453,0.493679549740441,0,0.243206428637567,0.146199987425332,0.219550115291051,0.402619256281115,3.57492912559016,0.720332286654991,0.330418782983798,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0.610953983535943,0.193952487167626,0.280543279561274,0.442655759869801,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0.476087281772027,0,0.315270288212382,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,5.29816946959713,5.62616095642575,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.790575555893047,2.57057053137446,0.283880170416537,0.534196811001766,0.81443479676788,0.989820737835213,0,0.242780636154981,0,0.377210159511796,0,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0.258717367565509,0.214337035031592,0.886701168211368,0.535106452806212,1.15184314421485,0,0,0,0,0.32977250588296,0,0.241251699712623,0.238744688006273,0.164140899745061,0,6.30446026835733,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0,0,0,0,0.448549638131936,0.496375471371293,0.388902376688095,0.516639293910924,2.02747350588934,0.704143431874524,0.781226309063701,1.25831213310853,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0,1.6942555278512,6.44455331110048,1.14579102687879,2.06223818812425,2.05524755931193,2.2661816921691,5.40018000185445,4.5032120322422,6.34399372577886,3.62432218226274,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0.412070114477788,0,0.505394423527595,0.25347929989024,0.754505365544305,0.37456602987953,0.192075457214608,0.287177344778066,0.476293691283074,0.579421629724277,0.578727661391115,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0.771626443924566,0.249810577937946,0.467863216890817,0.644613162144895,0.191288332068843,0,0.231867835620421|short_description=p7@Spag9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70834 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5NC72 | |||
|association_with_transcript=6bp_to_ENSMUST00000132079_5end | |||
|cluster_id=chr11:93905438..93905450,+ | |||
|description=CAGE_peak_7_at_Spag9_5end | |||
|id=chr11:93905438..93905450,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.54e-10!33;CL:0000047!1.54e-10!33;CL:0000031!1.54e-10!33;CL:0000404!1.54e-10!33;CL:0000117!3.23e-10!23;CL:0000337!3.23e-10!23;CL:0000221!1.32e-07!44;CL:0000133!1.32e-07!44;CL:0000393!1.37e-07!39;CL:0000211!1.37e-07!39;CL:0002319!3.64e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.57e-13,23;CL:0000337,3.57e-13,23;CL:0000540,1.89e-09,33;CL:0000047,1.89e-09,33;CL:0000031,1.89e-09,33;CL:0000404,1.89e-09,33;CL:0000393,1.80e-07,39;CL:0000211,1.80e-07,39;CL:0002610,2.34e-07,3;CL:0000221,3.05e-07,44;CL:0000133,3.05e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.92e-25!71;UBERON:0003075!2.92e-25!71;UBERON:0007284!2.92e-25!71;UBERON:0004121!3.57e-25!102;UBERON:0000924!3.57e-25!102;UBERON:0006601!3.57e-25!102;UBERON:0001017!1.30e-22!73;UBERON:0005743!1.30e-22!73;UBERON:0000073!1.38e-22!75;UBERON:0001016!1.38e-22!75;UBERON:0000033!1.68e-21!63;UBERON:0001049!1.16e-19!52;UBERON:0005068!1.16e-19!52;UBERON:0006241!1.16e-19!52;UBERON:0007135!1.16e-19!52;UBERON:0000955!5.18e-19!50;UBERON:0006238!5.18e-19!50;UBERON:0002616!2.42e-18!49;UBERON:0003056!3.14e-17!49;UBERON:0003080!2.12e-14!40;UBERON:0002020!3.37e-14!34;UBERON:0002780!1.11e-13!39;UBERON:0001890!1.11e-13!39;UBERON:0006240!1.11e-13!39;UBERON:0002791!1.34e-11!29;UBERON:0003528!1.34e-11!29;UBERON:0001893!1.34e-11!29;UBERON:0000153!6.08e-11!94;UBERON:0007811!1.38e-10!86;UBERON:0002021!7.29e-08!10;UBERON:0000411!7.29e-08!10;UBERON:0001950!7.29e-08!10;UBERON:0000956!3.23e-07!21;UBERON:0001869!3.23e-07!21;UBERON:0000203!3.23e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.37e-36,54;UBERON:0001017,1.93e-33,73;UBERON:0001016,2.67e-32,75;UBERON:0001049,2.87e-32,52;UBERON:0005068,2.87e-32,52;UBERON:0006241,2.87e-32,52;UBERON:0007135,2.87e-32,52;UBERON:0002346,8.23e-32,64;UBERON:0003075,8.23e-32,64;UBERON:0007284,8.23e-32,64;UBERON:0004121,1.42e-29,95;UBERON:0000924,1.42e-29,95;UBERON:0006601,1.42e-29,95;UBERON:0000955,2.85e-29,47;UBERON:0006238,2.85e-29,47;UBERON:0010371,1.42e-28,73;UBERON:0002616,1.00e-27,46;UBERON:0010314,1.36e-23,92;UBERON:0003080,5.87e-23,40;UBERON:0002020,9.80e-23,34;UBERON:0003056,1.51e-22,49;UBERON:0002780,2.62e-21,39;UBERON:0001890,2.62e-21,39;UBERON:0006240,2.62e-21,39;UBERON:0003528,3.22e-20,29;UBERON:0002791,3.22e-20,29;UBERON:0001893,3.22e-20,29;UBERON:0002021,1.88e-18,10;UBERON:0000411,1.88e-18,10;UBERON:0001950,1.88e-18,10;UBERON:0002619,3.86e-12,17;UBERON:0000956,2.11e-11,21;UBERON:0001869,2.11e-11,21;UBERON:0000203,2.11e-11,21;UBERON:0000025,3.53e-11,114;UBERON:0002420,7.57e-11,8;UBERON:0007245,7.57e-11,8;UBERON:0010009,7.57e-11,8;UBERON:0010011,7.57e-11,8;UBERON:0000454,7.57e-11,8;UBERON:0004111,8.64e-11,122;UBERON:0003076,1.34e-09,12;UBERON:0003057,1.34e-09,12;UBERON:0002950,9.90e-09,4;UBERON:0001891,9.90e-09,4;UBERON:0009616,9.90e-09,4;UBERON:0010286,9.90e-09,4;UBERON:0000483,1.82e-07,174;UBERON:0011216,1.96e-07,194;UBERON:0004684,2.34e-07,3;UBERON:0002275,2.34e-07,3;UBERON:0000119,2.78e-07,176 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0.286533439938757,0,0.404632921719196,1.05798195854407,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0.630974884054146,0.856952953211411,0.662605622854841,0.367472397644862,0.287536413054709,0,5.50579404996943,5.2351808614927,7.0659005297872,1.45074916503213,1.28082701043374,1.04182674111352,2.23346399201105,5.6276261003168,2.29197371665215,2.06240009831567,2.56269025438385,1.1183966749518,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.346970653532272,1.21786191324856,0,0.452167921657868,0.823120949949934,0.251333182659351,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,3.80615036115011,2.51336048176146,0,0,0,0,6.44099749440738,4.11750542536764,0.753926112677186,5.73620256634512,8.18289463457058,4.36354893575076,5.353961681236,0.203678727700633,0.124406970610093,0.252722758433675,0.841767423545896,0.520481771850815,0.229902104433473,0.540186389416048,0.150704817835715,1.2246569847239,1.0249097622788,0.749613796477831,1.03481348295606,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.590292695242212,0.154267112887378,0.465067889500816,0.268273401399619,1.05088808130453,0.493679549740441,0,0.243206428637567,0.146199987425332,0.219550115291051,0.402619256281115,3.57492912559016,0.720332286654991,0.330418782983798,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0.610953983535943,0.193952487167626,0.280543279561274,0.442655759869801,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0.476087281772027,0,0.315270288212382,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,5.29816946959713,5.62616095642575,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.790575555893047,2.57057053137446,0.283880170416537,0.534196811001766,0.81443479676788,0.989820737835213,0,0.242780636154981,0,0.377210159511796,0,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0.258717367565509,0.214337035031592,0.886701168211368,0.535106452806212,1.15184314421485,0,0,0,0,0.32977250588296,0,0.241251699712623,0.238744688006273,0.164140899745061,0,6.30446026835733,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0,0,0,0,0.448549638131936,0.496375471371293,0.388902376688095,0.516639293910924,2.02747350588934,0.704143431874524,0.781226309063701,1.25831213310853,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0,1.6942555278512,6.44455331110048,1.14579102687879,2.06223818812425,2.05524755931193,2.2661816921691,5.40018000185445,4.5032120322422,6.34399372577886,3.62432218226274,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0.412070114477788,0,0.505394423527595,0.25347929989024,0.754505365544305,0.37456602987953,0.192075457214608,0.287177344778066,0.476293691283074,0.579421629724277,0.578727661391115,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0.771626443924566,0.249810577937946,0.467863216890817,0.644613162144895,0.191288332068843,0,0.231867835620421 | |||
|short_description=p7@Spag9 | |||
}} |
Revision as of 08:26, 4 August 2015
Short description: | p7@Spag9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Spag9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 6bp_to_ENSMUST00000132079_5end |
EntrezGene: | 70834 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.57e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.57e-13 | 23 |
neuron | 1.89e-09 | 33 |
neuronal stem cell | 1.89e-09 | 33 |
neuroblast | 1.89e-09 | 33 |
electrically signaling cell | 1.89e-09 | 33 |
electrically responsive cell | 1.80e-07 | 39 |
electrically active cell | 1.80e-07 | 39 |
raphe nuclei neuron | 2.34e-07 | 3 |
ectodermal cell | 3.05e-07 | 44 |
neurectodermal cell | 3.05e-07 | 44 |