FFCP PHASE1:Mm9::chr15:79722809..79722820,+: Difference between revisions
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{{FFCP|EntrezGene=80287|HGNC=|UniProt=Q99J72,E9QMH1,Q3U5C5|association_with_transcript=-17bp_to_ENSMUST00000100424,ENSMUST00000109620,ENSMUST00000165537,NM_001160415,NM_030255,uc007wur.2,uc007wus.2,uc007wut.2,uc011zwd.1_5end|description=CAGE_peak_4_at_Apobec3_5end|id=chr15:79722809..79722820,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,1.26e-08,6;CL:0000556,1.26e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!9.09e-11!131;UBERON:0009142!9.09e-11!131;UBERON:0002193!2.38e-09!48;UBERON:0000077!4.27e-09!97;UBERON:0000926!4.93e-09!193;UBERON:0004120!4.93e-09!193;UBERON:0006603!4.93e-09!193;UBERON:0002405!5.96e-09!70;UBERON:0002390!6.24e-09!45;UBERON:0003061!6.24e-09!45;UBERON:0001041!1.01e-08!92;UBERON:0001007!7.78e-07!128;UBERON:0001555!7.78e-07!128;UBERON:0007026!7.78e-07!128;UBERON:0004921!8.63e-07!126;UBERON:0004185!8.63e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.96e-11,48;UBERON:0002405,2.96e-11,48;UBERON:0002390,3.07e-11,45;UBERON:0003061,3.07e-11,45;UBERON:0001041,4.57e-11,80;UBERON:0003887,9.07e-08,10;UBERON:0004177,1.07e-07,29;UBERON:0005057,1.07e-07,29;UBERON:0004921,1.22e-07,114;UBERON:0001007,2.61e-07,116;UBERON:0001555,2.61e-07,116;UBERON:0007026,2.61e-07,116;UBERON:0004119,5.42e-07,118;UBERON:0000925,5.42e-07,118;UBERON:0006595,5.42e-07,118|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0.774739940649458,0.422366166455,0,0.171217968225505,0.159544317990673,2.39681021903688,0.786783621770977,7.99463428357591,9.71881283471165,11.8925519281785,3.3123527362615,5.34746291062381,4.2438965179803,0.340173160604279,1.19149141441062,1.82839852397255,0.47997726838022,0.22940928106717,0.57423196411502,0.430761996159075,0,0,0,0.665191531965914,0,0,0,3.75507105676657,2.82598897109437,4.28755648150975,2.92972141515835,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.971020706062307,0.503587271902309,0.506884656097573,0.183546752161682,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0.839918529752175,0,2.18117387875057,0.725362142011344,1.34437519656986,0.771778308107841,0.286533439938757,0,0,0,0,1.35537812827653,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0.768436610643109,0.207379224616955,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.226714680320357,0.579728977403356,0,0,0,0,0,0,2.04516387093669,1.55871602761721,0.35333957451034,0.281686839553361,0,0,0,4.76280290224671,7.34743609877786,5.05524445014783,0.11418387971906,5.43769555659061,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0,0,0,0,5.30766331169925,1.13236794963186,3.3126227769059,6.30337829075789,0,0,0,0.766371165625774,2.27648736561249,1.19980546198682,1.01656181658452,0,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0.305518091550949,3.4833951770826,3.79084137650512,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,1.40442637462647,1.02939162845886,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.243206428637567,0,0.439100230582101,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0,0,0.257734922644187,0,0,0.380451252225118,0,0.164698954724011,0,0,0.38992817423824,0.898819408654221,0.432276099749388,1.59313018603494,0,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.210407459670956,0.569128834118316,0.295220295959204,0.31399745568275,0.370191491765402,0,1.83529616287703,1.57247196090562,0.899448449539415,1.62288097110802,2.41177159752417,1.78238096246994,2.30156909960649,1.94562272130042,1.92192989231657,1.43768206527355,1.48856379067401,0.624075346229121,0,0,0,0.923765950833023,0,0,0.339490171550376,0.938760993154008,0.670025029767263,1.42826184531608,0.585400943573396,0.315270288212382,0.664394068946325,1.2756381492599,1.3109065177259,1.72684981865896,2.16973587872267,1.50791283939272,0.54390568381871,3.44234991113325,2.48343071674259,0.160550589987792,0,0.327869890753351,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0,0,0.283880170416537,0,0.651547837414304,1.15479086080775,0,0,0.302323556964751,0.943025398779491,0.885905678642318,0.307435147943927,1.55056975900933,1.09060118843252,1.06949213515416,0.632073515871632,0,0,0,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0.882113592219848,0,0,0.120625849856312,0,0,0.874442509889552,0.370850604021019,4.27177201994632,0.206386867963223,2.40752885580625,6.96963290917357,7.92826520781946,4.80434163733698,1.18984900995699,0.979660166265606,1.79659965945751,3.81868247206045,0,0,0.432021363287205,1.25452977608681,0.87345025498471,1.34864346384821,0.41326727862668,0.523511883968059,1.8146096260851,0.621339313086926,1.12738587736838,0.299033092087958,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.419437377702843,0.483168241652012,0.288030006257865,0.948033361884535,2.22997736819181,1.33524244314275,1.29920822977795,1.61124026100733,1.58945083825012,1.56254084375959,2.51072196196781,1.00966449948148,1.06689529317,0.907435666231565,1.55932609183604,1.44317762460494,1.40252282617883,0.226730383615211,0,0,0,0.965947970160952,1.87682475451182,1.46521299413812,2.57242054894879,3.00943262421218,0,0,1.14579102687879,0,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0.486213434136588,0.419226325255965,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0,0.25347929989024,0.943131706930381,0.561849044819294,0.256100609619477,0.516919220600519,0,0.231768651889711,0.578727661391115,0,0,0,0.70990322463735,0,0.581385666529314,0.470546902076653,0.169229215783353,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.29551344712669,1.63692417267876,0.154936841185966,0.192906610981141,0,0.467863216890817,0.429742108096597,0,0.661774257358546,0.463735671240843|short_description=p4@Apobec3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:80287 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99J72,uniprot:E9QMH1,uniprot:Q3U5C5 | |||
|association_with_transcript=-17bp_to_ENSMUST00000100424,ENSMUST00000109620,ENSMUST00000165537,NM_001160415,NM_030255,uc007wur.2,uc007wus.2,uc007wut.2,uc011zwd.1_5end | |||
|cluster_id=chr15:79722809..79722820,+ | |||
|description=CAGE_peak_4_at_Apobec3_5end | |||
|id=chr15:79722809..79722820,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.26e-08,6;CL:0000556,1.26e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!9.09e-11!131;UBERON:0009142!9.09e-11!131;UBERON:0002193!2.38e-09!48;UBERON:0000077!4.27e-09!97;UBERON:0000926!4.93e-09!193;UBERON:0004120!4.93e-09!193;UBERON:0006603!4.93e-09!193;UBERON:0002405!5.96e-09!70;UBERON:0002390!6.24e-09!45;UBERON:0003061!6.24e-09!45;UBERON:0001041!1.01e-08!92;UBERON:0001007!7.78e-07!128;UBERON:0001555!7.78e-07!128;UBERON:0007026!7.78e-07!128;UBERON:0004921!8.63e-07!126;UBERON:0004185!8.63e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.96e-11,48;UBERON:0002405,2.96e-11,48;UBERON:0002390,3.07e-11,45;UBERON:0003061,3.07e-11,45;UBERON:0001041,4.57e-11,80;UBERON:0003887,9.07e-08,10;UBERON:0004177,1.07e-07,29;UBERON:0005057,1.07e-07,29;UBERON:0004921,1.22e-07,114;UBERON:0001007,2.61e-07,116;UBERON:0001555,2.61e-07,116;UBERON:0007026,2.61e-07,116;UBERON:0004119,5.42e-07,118;UBERON:0000925,5.42e-07,118;UBERON:0006595,5.42e-07,118 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0.774739940649458,0.422366166455,0,0.171217968225505,0.159544317990673,2.39681021903688,0.786783621770977,7.99463428357591,9.71881283471165,11.8925519281785,3.3123527362615,5.34746291062381,4.2438965179803,0.340173160604279,1.19149141441062,1.82839852397255,0.47997726838022,0.22940928106717,0.57423196411502,0.430761996159075,0,0,0,0.665191531965914,0,0,0,3.75507105676657,2.82598897109437,4.28755648150975,2.92972141515835,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.971020706062307,0.503587271902309,0.506884656097573,0.183546752161682,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0.839918529752175,0,2.18117387875057,0.725362142011344,1.34437519656986,0.771778308107841,0.286533439938757,0,0,0,0,1.35537812827653,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0.768436610643109,0.207379224616955,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.226714680320357,0.579728977403356,0,0,0,0,0,0,2.04516387093669,1.55871602761721,0.35333957451034,0.281686839553361,0,0,0,4.76280290224671,7.34743609877786,5.05524445014783,0.11418387971906,5.43769555659061,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0,0,0,0,5.30766331169925,1.13236794963186,3.3126227769059,6.30337829075789,0,0,0,0.766371165625774,2.27648736561249,1.19980546198682,1.01656181658452,0,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0.305518091550949,3.4833951770826,3.79084137650512,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,1.40442637462647,1.02939162845886,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.243206428637567,0,0.439100230582101,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0,0,0.257734922644187,0,0,0.380451252225118,0,0.164698954724011,0,0,0.38992817423824,0.898819408654221,0.432276099749388,1.59313018603494,0,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.210407459670956,0.569128834118316,0.295220295959204,0.31399745568275,0.370191491765402,0,1.83529616287703,1.57247196090562,0.899448449539415,1.62288097110802,2.41177159752417,1.78238096246994,2.30156909960649,1.94562272130042,1.92192989231657,1.43768206527355,1.48856379067401,0.624075346229121,0,0,0,0.923765950833023,0,0,0.339490171550376,0.938760993154008,0.670025029767263,1.42826184531608,0.585400943573396,0.315270288212382,0.664394068946325,1.2756381492599,1.3109065177259,1.72684981865896,2.16973587872267,1.50791283939272,0.54390568381871,3.44234991113325,2.48343071674259,0.160550589987792,0,0.327869890753351,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0,0,0.283880170416537,0,0.651547837414304,1.15479086080775,0,0,0.302323556964751,0.943025398779491,0.885905678642318,0.307435147943927,1.55056975900933,1.09060118843252,1.06949213515416,0.632073515871632,0,0,0,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0.882113592219848,0,0,0.120625849856312,0,0,0.874442509889552,0.370850604021019,4.27177201994632,0.206386867963223,2.40752885580625,6.96963290917357,7.92826520781946,4.80434163733698,1.18984900995699,0.979660166265606,1.79659965945751,3.81868247206045,0,0,0.432021363287205,1.25452977608681,0.87345025498471,1.34864346384821,0.41326727862668,0.523511883968059,1.8146096260851,0.621339313086926,1.12738587736838,0.299033092087958,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.419437377702843,0.483168241652012,0.288030006257865,0.948033361884535,2.22997736819181,1.33524244314275,1.29920822977795,1.61124026100733,1.58945083825012,1.56254084375959,2.51072196196781,1.00966449948148,1.06689529317,0.907435666231565,1.55932609183604,1.44317762460494,1.40252282617883,0.226730383615211,0,0,0,0.965947970160952,1.87682475451182,1.46521299413812,2.57242054894879,3.00943262421218,0,0,1.14579102687879,0,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0.486213434136588,0.419226325255965,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0,0.25347929989024,0.943131706930381,0.561849044819294,0.256100609619477,0.516919220600519,0,0.231768651889711,0.578727661391115,0,0,0,0.70990322463735,0,0.581385666529314,0.470546902076653,0.169229215783353,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.29551344712669,1.63692417267876,0.154936841185966,0.192906610981141,0,0.467863216890817,0.429742108096597,0,0.661774257358546,0.463735671240843 | |||
|short_description=p4@Apobec3 | |||
}} |
Revision as of 15:40, 5 August 2015
Short description: | p4@Apobec3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Apobec3_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENSMUST00000100424, ENSMUST00000109620, ENSMUST00000165537, NM_001160415, NM_030255, uc007wur.2, uc007wus.2, uc007wut.2, uc011zwd.1_5end |
EntrezGene: | 80287 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.26e-08 | 6 |
megakaryocyte | 1.26e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.96e-11 | 48 |
immune system | 2.96e-11 | 48 |
hematopoietic system | 3.07e-11 | 45 |
blood island | 3.07e-11 | 45 |
foregut | 4.57e-11 | 80 |
intraembryonic coelom | 9.07e-08 | 10 |
hemopoietic organ | 1.07e-07 | 29 |
immune organ | 1.07e-07 | 29 |
subdivision of digestive tract | 1.22e-07 | 114 |
digestive system | 2.61e-07 | 116 |
digestive tract | 2.61e-07 | 116 |
primitive gut | 2.61e-07 | 116 |
endoderm-derived structure | 5.42e-07 | 118 |
endoderm | 5.42e-07 | 118 |
presumptive endoderm | 5.42e-07 | 118 |