FFCP PHASE1:Hg19::chr5:127873496..127873584,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2201 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3604 | |||
|TSSclassifier=strong | |||
|UniProt=D6RJI3 | |||
|association_with_transcript=0bp_to_ENST00000508989_5end | |||
|description=CAGE_peak_3_at_FBN2_5end | |||
|id=chr5:127873496..127873584,- | |||
|ontology_enrichment_celltype=CL:0000055!8.21e-18!180;CL:0000057!1.54e-14!75;CL:0000860!7.91e-13!45;CL:0002057!1.22e-12!42;CL:0000048!1.78e-12!430;CL:0000723!4.17e-12!436;CL:0000144!8.34e-12!625;CL:0000034!2.12e-11!444;CL:0002371!1.56e-10!591;CL:0000680!1.65e-09!57;CL:0000056!1.65e-09!57;CL:0000355!1.65e-09!57;CL:0000187!1.38e-08!54;CL:0000393!8.78e-08!60;CL:0000211!8.78e-08!60;CL:0000548!8.88e-08!679;CL:0000004!8.88e-08!679;CL:0000255!8.88e-08!679;CL:0000012!1.06e-07!682;CL:0002620!1.86e-07!23;CL:0000183!7.63e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.02e-14;33!CL:0002057;5.02e-14;33!CL:0000473;1.95e-08;39!CL:0000234;1.95e-08;39!CL:0000576;4.09e-08;48!CL:0000057;6.12e-08;73!CL:0002620;7.03e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.69e-17,427;CL:0000723,7.06e-17,433;CL:0000034,1.55e-15,441;CL:0000057,3.01e-14,76;CL:0000860,8.74e-14,42;CL:0002057,8.74e-14,42;CL:0000680,2.74e-11,58;CL:0000056,2.74e-11,58;CL:0000355,2.74e-11,58;CL:0000187,3.27e-10,55;CL:0000473,3.47e-10,48;CL:0000234,3.47e-10,48;CL:0002320,1.62e-09,361;CL:0000393,3.00e-09,61;CL:0000211,3.00e-09,61;CL:0000134,8.56e-09,354;CL:0002620,6.10e-08,23;CL:0002194,3.37e-07,59;CL:0000576,3.37e-07,59;CL:0000040,3.37e-07,59;CL:0000559,3.37e-07,59;CL:0000192,8.18e-07,43;CL:0000514,8.18e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.22e-13!167;UBERON:0000468!1.10e-11!659;UBERON:0000914!5.15e-11!83;UBERON:0002329!5.15e-11!83;UBERON:0003077!5.15e-11!83;UBERON:0003059!5.15e-11!83;UBERON:0007282!5.15e-11!83;UBERON:0009618!5.15e-11!83;UBERON:0007285!5.15e-11!83;UBERON:0000486!2.28e-10!82;UBERON:0004290!4.86e-10!70;UBERON:0001134!1.83e-09!61;UBERON:0002036!1.83e-09!61;UBERON:0003082!1.83e-09!61;UBERON:0002385!5.42e-09!63;UBERON:0001015!5.42e-09!63;UBERON:0000383!5.42e-09!63;UBERON:0000467!2.55e-08!625;UBERON:0000480!3.96e-08!626;UBERON:0000479!3.59e-07!787;UBERON:0000926!4.62e-07!448;UBERON:0004120!4.62e-07!448;UBERON:0006603!4.62e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.33e-15,167;UBERON:0000926,1.33e-12,315;UBERON:0004120,1.33e-12,315;UBERON:0006603,1.33e-12,315;UBERON:0007524,1.18e-11,73;UBERON:0002329,1.57e-11,71;UBERON:0003059,1.57e-11,71;UBERON:0007282,1.57e-11,71;UBERON:0004290,1.57e-11,71;UBERON:0009618,1.57e-11,71;UBERON:0003077,4.16e-11,72;UBERON:0007285,4.16e-11,72;UBERON:0001134,4.83e-11,62;UBERON:0002036,4.83e-11,62;UBERON:0003082,4.83e-11,62;UBERON:0000486,6.87e-11,83;UBERON:0002385,3.64e-10,64;UBERON:0001015,3.64e-10,64;UBERON:0000383,3.64e-10,64;UBERON:0002384,2.82e-09,371;UBERON:0007503,7.34e-09,78;UBERON:0001434,5.25e-07,100 | |||
|phase1_expression=29.6135758211007,20.1254492457524,22.8346134635473,23.01685862122,17.8784437770915,14.8297549097063,7.59899634504932,3.15859936713415,0.783556884599516,0.245733936501509,0.697801167972428,5.46103430325431,0.791300934685361,2.47532705920093,6.2965501388304,2.6893005858071,4.21886169616784,3.65155045193687,1.95173119516203,1.47745269692145,1.63200552995402,0,1.71741592278634,1.77936752594749,1.63205431473244,0,0,0,1.96682138424452,2.30297638858328,4.64448369948228,1.83884244895785,1.8072355126695,4.06729411183466,0,0,0,3.32397245119126,2.80762226458198,3.68918480216948,0,0.32389366601898,0.257575567634187,5.52513307362346,7.17964293008738,3.39617685662943,5.57829688573643,4.52284676824008,3.40677007984614,6.90461741573161,4.61089271752381,3.31075121844019,7.23965929546899,3.87290810150296,2.70852973188684,7.52969358170419,4.63940455098338,3.37085226667627,4.59125838556354,4.8139354061414,3.19668562899521,7.25672860410775,6.58230070151385,2.55734850319616,5.22376629531451,6.80862269629368,6.85104473895132,8.54245461872927,2.60741459210101,1.73751075764093,6.65939452896706,9.94349617166425,2.84816148696796,1.05627643155971,1.70083439972035,1.46761051855863,8.08766144254765,10.3622056060639,7.23265140136861,0,0.39783335439818,0.547992461293902,0,0,0,0.853460445133014,0,0.574752439954483,0,0,0,0,0.382273228125229,0,1.12101712596307,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.511946444617674,0,0.236777252044017,0.821127996921047,0,0,0,0,12.0726154746655,10.7404551948565,3.97583067623023,15.0401373190767,7.53201898596283,1.5905718941022,5.35298357332899,4.06499713805492,5.32150553910154,4.65524364173568,0.261958150995425,0.728590576585084,0.370784442784429,0,0,0,0.238490624305342,0,0,0.39752481473341,0,0,0,0,1.10047216776027,0.835979866147242,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.625098097988558,0.673588117878509,1.80178368773316,1.53316637465883,4.74632829784064,2.38162267109529,0,3.87780264148325,0,5.4666914686485,0,0.529636723252875,14.9155042789383,1.41867352879343,2.24271040056923,2.1349799145941,2.4666754841716,2.48968828319813,9.69916838901754,3.75962377160955,7.56787138224657,8.06646294271999,4.92075006850973,0.624320153660641,2.2818872861778,1.79338416662161,1.76151747965647,5.17993421978021,2.66856532734272,5.71631679513701,2.21101771161182,5.78624374584287,16.6320400019487,16.0723504031062,3.64064544775211,4.31170885089743,0.841680569770331,1.25118519871964,3.87889761677856,4.38977620880838,6.43624371177941,14.7233297728465,1.36118619792025,16.1450672119976,13.4541154955697,4.23863802319124,6.00182192168805,4.12210116953756,5.41045134095821,2.23340227597908,12.9957775825775,9.06164147999147,18.9325330683086,13.3472353031334,10.5069936932228,24.1406522911298,3.82857973265033,4.91725717700414,3.86521706326594,1.90922284413584,3.72845974005705,0.365921118388786,0.397589304964456,0,0.310983165046111,0,0,1.56449532329816,4.5026865673502,0,26.9333398258548,18.0469870417396,2.12952240071719,1.85443159085912,0.964044119533928,1.54411561825352,2.17879444092406,1.42362371466658,1.07865046528132,0.98110732562673,0.769494313892781,0,4.20725321410337,1.2347220339942,5.88034845542168,0,0,0,0,0,3.77449182656756,0.439001141634502,1.1240175325762,0.301586917234893,1.75918045801206,3.58389135841357,0,2.88662684050547,0.231860809950154,11.6234607293463,0.288732895522148,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0.16798212819886,0,1.07470227243418,0.581267877027924,1.91691339582606,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,1.00917975910825,6.5394010324992,0.66004457238855,7.23921608243556,17.8828222925941,2.535908257668,1.59562869950922,2.08014873822732,1.28603687131071,1.41849132023278,1.5985330740966,6.29103172095849,10.8524321078289,4.93944202068461,1.95441710576241,9.95097456479128,5.543663110534,0.602878754119172,0.871533458600294,2.39935178836937,0,0.502257091432126,0,2.39624855491583,4.59447743336456,1.42636905040718,11.1481606134036,8.01357657946495,1.61154866915906,0,0.197030760201927,0,0.128343036279748,1.52456774533478,2.60279707715243,0,0,1.27587750330633,1.49801404789436,0,0.414415513436035,6.74803204455269,3.50119364741774,2.71265023699736,4.99130067673937,7.13715955188647,7.09660867652706,0.35142424497814,14.7463588866582,9.09630016223939,21.729344971426,0,2.58116835958384,3.99664626553181,0.195801157462741,0,3.3082884179662,5.1771408196468,1.38745825144478,0.606255142892519,1.66435439510497,2.11673205330776,10.6686357362074,18.7223607411436,10.9457436828899,6.40695746278505,10.2341449813341,3.37793234401576,13.3576259800492,1.07946785661859,4.43904313282818,1.06765302817952,2.59627214591811,1.04589340613963,0,3.20810352485256,1.84161977871793,4.59257792658427,5.46273504020151,15.0793077203338,0.451199612907412,0,0,1.46139224653261,0.316654886678627,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0.769350375349168,1.31205858279882,6.83294628795036,9.78889610653362,0.457847324091717,0.330037999682352,2.87132768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| |||
|short_description=p3@FBN2 | |||
}} |
Revision as of 07:13, 22 January 2014
Short description: | p3@FBN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FBN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508989_5end |
EntrezGene: | FBN2 |
HGNC: | 3604 |
UniProt: | D6RJI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.69e-17 | 427 |
somatic stem cell | 7.06e-17 | 433 |
stem cell | 1.55e-15 | 441 |
fibroblast | 3.01e-14 | 76 |
classical monocyte | 8.74e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.74e-14 | 42 |
muscle precursor cell | 2.74e-11 | 58 |
myoblast | 2.74e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.74e-11 | 58 |
muscle cell | 3.27e-10 | 55 |
defensive cell | 3.47e-10 | 48 |
phagocyte | 3.47e-10 | 48 |
connective tissue cell | 1.62e-09 | 361 |
electrically responsive cell | 3.00e-09 | 61 |
electrically active cell | 3.00e-09 | 61 |
mesenchymal cell | 8.56e-09 | 354 |
skin fibroblast | 6.10e-08 | 23 |
monopoietic cell | 3.37e-07 | 59 |
monocyte | 3.37e-07 | 59 |
monoblast | 3.37e-07 | 59 |
promonocyte | 3.37e-07 | 59 |
smooth muscle cell | 8.18e-07 | 43 |
smooth muscle myoblast | 8.18e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.33e-15 | 167 |
mesoderm | 1.33e-12 | 315 |
mesoderm-derived structure | 1.33e-12 | 315 |
presumptive mesoderm | 1.33e-12 | 315 |
dense mesenchyme tissue | 1.18e-11 | 73 |
somite | 1.57e-11 | 71 |
presomitic mesoderm | 1.57e-11 | 71 |
presumptive segmental plate | 1.57e-11 | 71 |
dermomyotome | 1.57e-11 | 71 |
trunk paraxial mesoderm | 1.57e-11 | 71 |
paraxial mesoderm | 4.16e-11 | 72 |
presumptive paraxial mesoderm | 4.16e-11 | 72 |
skeletal muscle tissue | 4.83e-11 | 62 |
striated muscle tissue | 4.83e-11 | 62 |
myotome | 4.83e-11 | 62 |
multilaminar epithelium | 6.87e-11 | 83 |
muscle tissue | 3.64e-10 | 64 |
musculature | 3.64e-10 | 64 |
musculature of body | 3.64e-10 | 64 |
connective tissue | 2.82e-09 | 371 |
epithelial vesicle | 7.34e-09 | 78 |
skeletal system | 5.25e-07 | 100 |