FFCP PHASE1:Mm9::chr16:91269972..91269978,+: Difference between revisions
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{{FFCP|EntrezGene=50914|HGNC=|MCL_coexpression_id=519|UniProt=Q9JKN5,Q3UN59|association_with_transcript=-35bp_to_ENSMUST00000056882,NM_016968,uc007zxf.1_5end|description=CAGE_peak_3_at_Olig1_5end|id=chr16:91269972..91269978,+|ontology_enrichment_celltype=CL:0002319!1.72e-14!43;CL:0000221!5.95e-14!44;CL:0000133!5.95e-14!44;CL:0000117!5.87e-12!23;CL:0000337!5.87e-12!23;CL:0000055!3.34e-11!50;CL:0000540!6.28e-10!33;CL:0000047!6.28e-10!33;CL:0000031!6.28e-10!33;CL:0000404!6.28e-10!33;CL:0002453!9.45e-08!8;CL:0000393!1.84e-07!39;CL:0000211!1.84e-07!39|ontology_enrichment_celltype_v019_2=CL:0002319,1.13e-15,43;CL:0000221,3.06e-15,44;CL:0000133,3.06e-15,44;CL:0002453,6.18e-14,8;CL:0000117,5.05e-12,23;CL:0000337,5.05e-12,23;CL:0000333,5.02e-11,10;CL:0000095,5.02e-11,10;CL:0000243,5.02e-11,10;CL:0000123,5.02e-11,10;CL:0000125,5.02e-11,10;CL:0000030,5.02e-11,10;CL:0000339,5.02e-11,10;CL:0002610,3.56e-10,3;CL:0002614,1.36e-09,3;CL:0002321,2.37e-08,70;CL:0000128,2.85e-08,6;CL:0000126,2.85e-08,6;CL:0000127,2.85e-08,6;CL:0000878,4.37e-08,2;CL:0000129,4.37e-08,2;CL:0002611,6.90e-08,2;CL:0000540,7.80e-08,33;CL:0000047,7.80e-08,33;CL:0000031,7.80e-08,33;CL:0000404,7.80e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.28e-29!73;UBERON:0005743!1.28e-29!73;UBERON:0000073!2.22e-28!75;UBERON:0001016!2.22e-28!75;UBERON:0001049!1.20e-23!52;UBERON:0005068!1.20e-23!52;UBERON:0006241!1.20e-23!52;UBERON:0007135!1.20e-23!52;UBERON:0000955!1.60e-21!50;UBERON:0006238!1.60e-21!50;UBERON:0002616!1.46e-20!49;UBERON:0004121!3.06e-18!102;UBERON:0000924!3.06e-18!102;UBERON:0006601!3.06e-18!102;UBERON:0002020!4.39e-18!34;UBERON:0000033!1.50e-16!63;UBERON:0002346!9.70e-16!71;UBERON:0003075!9.70e-16!71;UBERON:0007284!9.70e-16!71;UBERON:0003080!1.84e-13!40;UBERON:0002791!4.10e-13!29;UBERON:0003528!4.10e-13!29;UBERON:0001893!4.10e-13!29;UBERON:0002780!1.42e-12!39;UBERON:0001890!1.42e-12!39;UBERON:0006240!1.42e-12!39;UBERON:0003076!4.40e-12!12;UBERON:0003057!4.40e-12!12;UBERON:0003056!3.52e-11!49;UBERON:0007811!1.25e-09!86;UBERON:0000153!1.74e-08!94;UBERON:0002420!2.33e-08!8;UBERON:0007245!2.33e-08!8;UBERON:0010009!2.33e-08!8;UBERON:0010011!2.33e-08!8;UBERON:0000454!2.33e-08!8;UBERON:0000025!3.48e-08!114;UBERON:0002240!4.25e-08!6;UBERON:0005174!4.25e-08!6;UBERON:0001137!4.25e-08!6;UBERON:0002298!4.37e-08!6;UBERON:0000956!5.12e-07!21;UBERON:0001869!5.12e-07!21;UBERON:0000203!5.12e-07!21;UBERON:0001948!6.45e-07!5;UBERON:0002315!6.45e-07!5;UBERON:0002619!6.97e-07!17;UBERON:0004111!7.31e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0000073,3.43e-26,54;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0001049,2.42e-22,52;UBERON:0005068,2.42e-22,52;UBERON:0006241,2.42e-22,52;UBERON:0007135,2.42e-22,52;UBERON:0003076,9.18e-21,12;UBERON:0003057,9.18e-21,12;UBERON:0002346,2.35e-17,64;UBERON:0003075,2.35e-17,64;UBERON:0007284,2.35e-17,64;UBERON:0000955,2.49e-15,47;UBERON:0006238,2.49e-15,47;UBERON:0010371,1.09e-14,73;UBERON:0002616,8.32e-14,46;UBERON:0002240,1.17e-13,6;UBERON:0005174,1.17e-13,6;UBERON:0001137,1.17e-13,6;UBERON:0002020,1.55e-12,34;UBERON:0002950,2.34e-12,4;UBERON:0001891,2.34e-12,4;UBERON:0009616,2.34e-12,4;UBERON:0010286,2.34e-12,4;UBERON:0010314,8.99e-11,92;UBERON:0001948,9.81e-11,5;UBERON:0002315,9.81e-11,5;UBERON:0004684,3.56e-10,3;UBERON:0002275,3.56e-10,3;UBERON:0002038,1.36e-09,3;UBERON:0009663,1.36e-09,3;UBERON:0009661,1.36e-09,3;UBERON:0000125,1.36e-09,3;UBERON:0002308,1.36e-09,3;UBERON:0004733,6.86e-09,6;UBERON:0004732,6.86e-09,6;UBERON:0002028,6.86e-09,6;UBERON:0007277,6.86e-09,6;UBERON:0011216,1.08e-08,194;UBERON:0003080,1.57e-08,40;UBERON:0002256,6.90e-08,2;UBERON:0000025,7.20e-08,114;UBERON:0001896,1.00e-07,2;UBERON:0002298,1.00e-07,2;UBERON:0005290,1.00e-07,2;UBERON:0010096,1.00e-07,2;UBERON:0002780,2.78e-07,39;UBERON:0001890,2.78e-07,39;UBERON:0006240,2.78e-07,39;UBERON:0004111,4.49e-07,122;UBERON:0003528,9.36e-07,29;UBERON:0002791,9.36e-07,29;UBERON:0001893,9.36e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36050312760893,1.09843091367236,0.972149495371417,1.1198913730029,2.87505128729943,0,0,0,0,0,0,0.202316460859598,0,0,0,0.889294796111139,0,0,0,6.5912024314049,8.06858441175265,0,0.135005938331691,0,4.85606673486466,4.19650227808066,0.122490799214954,0.0958454710182364,0,3.30347642998166,2.42605942361857,3.5329502648936,0.395658863190582,0.182975287204819,0.52091337055676,2.51264699101243,2.25105044012672,2.44477196442896,2.65165726926301,2.70506193518296,0.559198337475902,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0.878342391034642,1.67557365450764,0,0,0,0,2.69623150928681,2.74500361691176,0.376963056338593,1.39059456153821,0.767146371990992,3.94797284663164,3.24482526135515,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,3.5163505977661,0,0,0,0,0,0.716906393857656,0.445597348164788,0.849229592366497,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0.330916980914195,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.859265911718438,1.37016503954128,2.2661816921691,0,0.900642406448441,0.453142408984205,0,0,0.399024873401031,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.463537303779422,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0|short_description=p3@Olig1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50914 | |||
|HGNC= | |||
|MCL_coexpression_id=519 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JKN5,uniprot:Q3UN59 | |||
|association_with_transcript=-35bp_to_ENSMUST00000056882,NM_016968,uc007zxf.1_5end | |||
|cluster_id=chr16:91269972..91269978,+ | |||
|description=CAGE_peak_3_at_Olig1_5end | |||
|id=chr16:91269972..91269978,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.72e-14!43;CL:0000221!5.95e-14!44;CL:0000133!5.95e-14!44;CL:0000117!5.87e-12!23;CL:0000337!5.87e-12!23;CL:0000055!3.34e-11!50;CL:0000540!6.28e-10!33;CL:0000047!6.28e-10!33;CL:0000031!6.28e-10!33;CL:0000404!6.28e-10!33;CL:0002453!9.45e-08!8;CL:0000393!1.84e-07!39;CL:0000211!1.84e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.13e-15,43;CL:0000221,3.06e-15,44;CL:0000133,3.06e-15,44;CL:0002453,6.18e-14,8;CL:0000117,5.05e-12,23;CL:0000337,5.05e-12,23;CL:0000333,5.02e-11,10;CL:0000095,5.02e-11,10;CL:0000243,5.02e-11,10;CL:0000123,5.02e-11,10;CL:0000125,5.02e-11,10;CL:0000030,5.02e-11,10;CL:0000339,5.02e-11,10;CL:0002610,3.56e-10,3;CL:0002614,1.36e-09,3;CL:0002321,2.37e-08,70;CL:0000128,2.85e-08,6;CL:0000126,2.85e-08,6;CL:0000127,2.85e-08,6;CL:0000878,4.37e-08,2;CL:0000129,4.37e-08,2;CL:0002611,6.90e-08,2;CL:0000540,7.80e-08,33;CL:0000047,7.80e-08,33;CL:0000031,7.80e-08,33;CL:0000404,7.80e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.28e-29!73;UBERON:0005743!1.28e-29!73;UBERON:0000073!2.22e-28!75;UBERON:0001016!2.22e-28!75;UBERON:0001049!1.20e-23!52;UBERON:0005068!1.20e-23!52;UBERON:0006241!1.20e-23!52;UBERON:0007135!1.20e-23!52;UBERON:0000955!1.60e-21!50;UBERON:0006238!1.60e-21!50;UBERON:0002616!1.46e-20!49;UBERON:0004121!3.06e-18!102;UBERON:0000924!3.06e-18!102;UBERON:0006601!3.06e-18!102;UBERON:0002020!4.39e-18!34;UBERON:0000033!1.50e-16!63;UBERON:0002346!9.70e-16!71;UBERON:0003075!9.70e-16!71;UBERON:0007284!9.70e-16!71;UBERON:0003080!1.84e-13!40;UBERON:0002791!4.10e-13!29;UBERON:0003528!4.10e-13!29;UBERON:0001893!4.10e-13!29;UBERON:0002780!1.42e-12!39;UBERON:0001890!1.42e-12!39;UBERON:0006240!1.42e-12!39;UBERON:0003076!4.40e-12!12;UBERON:0003057!4.40e-12!12;UBERON:0003056!3.52e-11!49;UBERON:0007811!1.25e-09!86;UBERON:0000153!1.74e-08!94;UBERON:0002420!2.33e-08!8;UBERON:0007245!2.33e-08!8;UBERON:0010009!2.33e-08!8;UBERON:0010011!2.33e-08!8;UBERON:0000454!2.33e-08!8;UBERON:0000025!3.48e-08!114;UBERON:0002240!4.25e-08!6;UBERON:0005174!4.25e-08!6;UBERON:0001137!4.25e-08!6;UBERON:0002298!4.37e-08!6;UBERON:0000956!5.12e-07!21;UBERON:0001869!5.12e-07!21;UBERON:0000203!5.12e-07!21;UBERON:0001948!6.45e-07!5;UBERON:0002315!6.45e-07!5;UBERON:0002619!6.97e-07!17;UBERON:0004111!7.31e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0000073,3.43e-26,54;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0001049,2.42e-22,52;UBERON:0005068,2.42e-22,52;UBERON:0006241,2.42e-22,52;UBERON:0007135,2.42e-22,52;UBERON:0003076,9.18e-21,12;UBERON:0003057,9.18e-21,12;UBERON:0002346,2.35e-17,64;UBERON:0003075,2.35e-17,64;UBERON:0007284,2.35e-17,64;UBERON:0000955,2.49e-15,47;UBERON:0006238,2.49e-15,47;UBERON:0010371,1.09e-14,73;UBERON:0002616,8.32e-14,46;UBERON:0002240,1.17e-13,6;UBERON:0005174,1.17e-13,6;UBERON:0001137,1.17e-13,6;UBERON:0002020,1.55e-12,34;UBERON:0002950,2.34e-12,4;UBERON:0001891,2.34e-12,4;UBERON:0009616,2.34e-12,4;UBERON:0010286,2.34e-12,4;UBERON:0010314,8.99e-11,92;UBERON:0001948,9.81e-11,5;UBERON:0002315,9.81e-11,5;UBERON:0004684,3.56e-10,3;UBERON:0002275,3.56e-10,3;UBERON:0002038,1.36e-09,3;UBERON:0009663,1.36e-09,3;UBERON:0009661,1.36e-09,3;UBERON:0000125,1.36e-09,3;UBERON:0002308,1.36e-09,3;UBERON:0004733,6.86e-09,6;UBERON:0004732,6.86e-09,6;UBERON:0002028,6.86e-09,6;UBERON:0007277,6.86e-09,6;UBERON:0011216,1.08e-08,194;UBERON:0003080,1.57e-08,40;UBERON:0002256,6.90e-08,2;UBERON:0000025,7.20e-08,114;UBERON:0001896,1.00e-07,2;UBERON:0002298,1.00e-07,2;UBERON:0005290,1.00e-07,2;UBERON:0010096,1.00e-07,2;UBERON:0002780,2.78e-07,39;UBERON:0001890,2.78e-07,39;UBERON:0006240,2.78e-07,39;UBERON:0004111,4.49e-07,122;UBERON:0003528,9.36e-07,29;UBERON:0002791,9.36e-07,29;UBERON:0001893,9.36e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36050312760893,1.09843091367236,0.972149495371417,1.1198913730029,2.87505128729943,0,0,0,0,0,0,0.202316460859598,0,0,0,0.889294796111139,0,0,0,6.5912024314049,8.06858441175265,0,0.135005938331691,0,4.85606673486466,4.19650227808066,0.122490799214954,0.0958454710182364,0,3.30347642998166,2.42605942361857,3.5329502648936,0.395658863190582,0.182975287204819,0.52091337055676,2.51264699101243,2.25105044012672,2.44477196442896,2.65165726926301,2.70506193518296,0.559198337475902,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0.878342391034642,1.67557365450764,0,0,0,0,2.69623150928681,2.74500361691176,0.376963056338593,1.39059456153821,0.767146371990992,3.94797284663164,3.24482526135515,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,3.5163505977661,0,0,0,0,0,0.716906393857656,0.445597348164788,0.849229592366497,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0.330916980914195,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.859265911718438,1.37016503954128,2.2661816921691,0,0.900642406448441,0.453142408984205,0,0,0.399024873401031,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.463537303779422,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p3@Olig1 | |||
}} |
Revision as of 04:32, 4 August 2015
Short description: | p3@Olig1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Olig1_5end |
Coexpression cluster: | MCL_coexpression_mm9:519 |
Association with transcript: | -35bp_to_ENSMUST00000056882, NM_016968, uc007zxf.1_5end |
EntrezGene: | 50914 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.13e-15 | 43 |
ectodermal cell | 3.06e-15 | 44 |
neurectodermal cell | 3.06e-15 | 44 |
oligodendrocyte precursor cell | 6.18e-14 | 8 |
CNS neuron (sensu Vertebrata) | 5.05e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.05e-12 | 23 |
migratory neural crest cell | 5.02e-11 | 10 |
neuron associated cell | 5.02e-11 | 10 |
glial cell (sensu Vertebrata) | 5.02e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 5.02e-11 | 10 |
glial cell | 5.02e-11 | 10 |
glioblast | 5.02e-11 | 10 |
glioblast (sensu Vertebrata) | 5.02e-11 | 10 |
raphe nuclei neuron | 3.56e-10 | 3 |
neuron of the substantia nigra | 1.36e-09 | 3 |
embryonic cell | 2.37e-08 | 70 |
oligodendrocyte | 2.85e-08 | 6 |
macroglial cell | 2.85e-08 | 6 |
astrocyte | 2.85e-08 | 6 |
central nervous system macrophage | 4.37e-08 | 2 |
microglial cell | 4.37e-08 | 2 |
neuron of the dorsal spinal cord | 6.90e-08 | 2 |
neuron | 7.80e-08 | 33 |
neuronal stem cell | 7.80e-08 | 33 |
neuroblast | 7.80e-08 | 33 |
electrically signaling cell | 7.80e-08 | 33 |