FFCP PHASE1:Mm9::chr17:74801997..74802007,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:74801997..74802007,-|id=chr17:74801997..74802007,-|ontology_enrichment_celltype=CL:0000239!4.05e-18!6;CL:0000677!4.05e-18!6;CL:0000212!4.05e-18!6;CL:0000584!4.05e-18!6;CL:0002563!1.28e-15!9;CL:0002251!1.28e-15!9;CL:0000075!2.00e-15!7;CL:0000066!3.54e-10!25;CL:0000473!1.20e-09!3;CL:0000627!1.20e-09!3;CL:0000682!1.20e-09!3;CL:0002076!6.10e-09!15|ontology_enrichment_celltype_v019_2=CL:0000239,6.71e-34,6;CL:0000677,6.71e-34,6;CL:0000584,6.71e-34,6;CL:0000075,4.29e-29,7;CL:0002563,1.12e-22,9;CL:0002251,1.12e-22,9;CL:0000066,1.34e-15,25;CL:0002076,1.17e-13,15;CL:0000682,9.49e-12,3;CL:0000223,2.94e-10,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002369!2.39e-18!7;UBERON:0006858!2.39e-18!7;UBERON:0001242!5.71e-17!13;UBERON:0000060!5.71e-17!13;UBERON:0001262!5.71e-17!13;UBERON:0004786!5.71e-17!13;UBERON:0003350!1.28e-15!9;UBERON:0004808!1.28e-15!9;UBERON:0001277!1.28e-15!9;UBERON:0000344!1.76e-14!15;UBERON:0000160!1.08e-13!43;UBERON:0000485!1.39e-12!11;UBERON:0002342!1.46e-12!10;UBERON:0005062!1.46e-12!10;UBERON:0004923!2.76e-10!24;UBERON:0005409!5.07e-09!59;UBERON:0003064!1.07e-08!14|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.12e-22,9;UBERON:0004808,1.12e-22,9;UBERON:0001277,1.12e-22,9;UBERON:0001242,3.30e-22,13;UBERON:0001262,3.30e-22,13;UBERON:0004786,3.30e-22,13;UBERON:0000344,3.06e-19,15;UBERON:0000485,1.39e-18,11;UBERON:0000160,2.07e-12,31;UBERON:0004923,5.57e-12,24;UBERON:0005409,4.75e-08,47|phase1_expression=0,8.72438519098403,4.54999239389536,14.8207463540347,9.5170188689806,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59385571292016,3.01533397311352,0.861884930743556,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.173485326766136,0.608930956624282,0.922461989024234,1.95939432718409,0.940709657085638,0.125666591329675,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,2.90895623329899,0,0,0,0,0,0,0,0.823494773620054,0.502670417600539,0,0.58489226135736,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:74801997..74802007,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:74801997..74802007,- | |||
|description=CAGE_peak_at_chr17:74801997..74802007,- | |||
|id=chr17:74801997..74802007,- | |||
|ontology_enrichment_celltype=CL:0000239!4.05e-18!6;CL:0000677!4.05e-18!6;CL:0000212!4.05e-18!6;CL:0000584!4.05e-18!6;CL:0002563!1.28e-15!9;CL:0002251!1.28e-15!9;CL:0000075!2.00e-15!7;CL:0000066!3.54e-10!25;CL:0000473!1.20e-09!3;CL:0000627!1.20e-09!3;CL:0000682!1.20e-09!3;CL:0002076!6.10e-09!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.71e-34,6;CL:0000677,6.71e-34,6;CL:0000584,6.71e-34,6;CL:0000075,4.29e-29,7;CL:0002563,1.12e-22,9;CL:0002251,1.12e-22,9;CL:0000066,1.34e-15,25;CL:0002076,1.17e-13,15;CL:0000682,9.49e-12,3;CL:0000223,2.94e-10,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!2.39e-18!7;UBERON:0006858!2.39e-18!7;UBERON:0001242!5.71e-17!13;UBERON:0000060!5.71e-17!13;UBERON:0001262!5.71e-17!13;UBERON:0004786!5.71e-17!13;UBERON:0003350!1.28e-15!9;UBERON:0004808!1.28e-15!9;UBERON:0001277!1.28e-15!9;UBERON:0000344!1.76e-14!15;UBERON:0000160!1.08e-13!43;UBERON:0000485!1.39e-12!11;UBERON:0002342!1.46e-12!10;UBERON:0005062!1.46e-12!10;UBERON:0004923!2.76e-10!24;UBERON:0005409!5.07e-09!59;UBERON:0003064!1.07e-08!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.12e-22,9;UBERON:0004808,1.12e-22,9;UBERON:0001277,1.12e-22,9;UBERON:0001242,3.30e-22,13;UBERON:0001262,3.30e-22,13;UBERON:0004786,3.30e-22,13;UBERON:0000344,3.06e-19,15;UBERON:0000485,1.39e-18,11;UBERON:0000160,2.07e-12,31;UBERON:0004923,5.57e-12,24;UBERON:0005409,4.75e-08,47 | |||
|phase1_expression=0,8.72438519098403,4.54999239389536,14.8207463540347,9.5170188689806,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59385571292016,3.01533397311352,0.861884930743556,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.173485326766136,0.608930956624282,0.922461989024234,1.95939432718409,0.940709657085638,0.125666591329675,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,2.90895623329899,0,0,0,0,0,0,0,0.823494773620054,0.502670417600539,0,0.58489226135736,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:74801997..74802007,- | |||
}} |
Latest revision as of 08:15, 5 August 2015
Short description: | p@chr17:74801997..74802007, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:74801997..74802007, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.71e-34 | 6 |
gut absorptive cell | 6.71e-34 | 6 |
enterocyte | 6.71e-34 | 6 |
columnar/cuboidal epithelial cell | 4.29e-29 | 7 |
intestinal epithelial cell | 1.12e-22 | 9 |
epithelial cell of alimentary canal | 1.12e-22 | 9 |
epithelial cell | 1.34e-15 | 25 |
endo-epithelial cell | 1.17e-13 | 15 |
M cell of gut | 9.49e-12 | 3 |
endodermal cell | 2.94e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.12e-22 | 9 |
gastrointestinal system epithelium | 1.12e-22 | 9 |
intestinal epithelium | 1.12e-22 | 9 |
intestinal mucosa | 3.30e-22 | 13 |
wall of intestine | 3.30e-22 | 13 |
gastrointestinal system mucosa | 3.30e-22 | 13 |
mucosa | 3.06e-19 | 15 |
simple columnar epithelium | 1.39e-18 | 11 |
intestine | 2.07e-12 | 31 |
organ component layer | 5.57e-12 | 24 |
gastrointestinal system | 4.75e-08 | 47 |