FFCP PHASE1:Mm9::chr1:156931282..156931291,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:156931282..156931291,-|id=chr1:156931282..156931291,-|ontology_enrichment_celltype=CL:0002563!5.79e-20!9;CL:0002251!5.79e-20!9;CL:0000239!5.24e-15!6;CL:0000677!5.24e-15!6;CL:0000212!5.24e-15!6;CL:0000584!5.24e-15!6;CL:0000066!2.39e-13!25;CL:0000075!9.83e-13!7;CL:0002076!3.15e-11!15;CL:0000223!7.35e-10!20;CL:0000473!3.30e-08!3;CL:0000627!3.30e-08!3;CL:0000682!3.30e-08!3|ontology_enrichment_celltype_v019_2=CL:0000239,5.40e-48,6;CL:0000677,5.40e-48,6;CL:0000584,5.40e-48,6;CL:0000075,3.74e-41,7;CL:0002563,5.04e-32,9;CL:0002251,5.04e-32,9;CL:0000066,2.20e-25,25;CL:0000682,1.96e-24,3;CL:0002076,3.30e-19,15;CL:0000223,2.21e-14,20;CL:0000473,7.34e-11,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.05e-31!15;UBERON:0001242!1.11e-27!13;UBERON:0000060!1.11e-27!13;UBERON:0001262!1.11e-27!13;UBERON:0004786!1.11e-27!13;UBERON:0000160!5.02e-25!43;UBERON:0003350!5.79e-20!9;UBERON:0004808!5.79e-20!9;UBERON:0001277!5.79e-20!9;UBERON:0004923!2.13e-18!24;UBERON:0005409!3.04e-18!59;UBERON:0000485!5.44e-16!11;UBERON:0001007!6.91e-11!128;UBERON:0001555!6.91e-11!128;UBERON:0007026!6.91e-11!128;UBERON:0004119!1.32e-10!130;UBERON:0000925!1.32e-10!130;UBERON:0006595!1.32e-10!130;UBERON:0004921!3.11e-09!126;UBERON:0004185!3.11e-09!126;UBERON:0000331!2.87e-07!3;UBERON:0002116!2.87e-07!3;UBERON:0001204!2.87e-07!3;UBERON:0001168!2.87e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.04e-32,9;UBERON:0004808,5.04e-32,9;UBERON:0001277,5.04e-32,9;UBERON:0001242,6.43e-30,13;UBERON:0001262,6.43e-30,13;UBERON:0004786,6.43e-30,13;UBERON:0000485,3.32e-26,11;UBERON:0000344,6.61e-26,15;UBERON:0004923,4.23e-16,24;UBERON:0000160,4.40e-16,31;UBERON:0005409,1.94e-10,47;UBERON:0001153,3.65e-09,1;UBERON:0001045,3.65e-09,1|phase1_expression=0,6.63053274514786,2.72999543633722,4.83942738090928,8.5152274090879,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.91763712426868,2.29692785646008,2.58457197695445,1.72376986148711,0.190023419456374,0.756090389279792,2.21730510655305,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.793351699990633,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.596869416123452,0.58489226135736,0.898819408654221,0.864552199498777,0.796565093017469,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:156931282..156931291,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:156931282..156931291,- | |||
|description=CAGE_peak_at_chr1:156931282..156931291,- | |||
|id=chr1:156931282..156931291,- | |||
|ontology_enrichment_celltype=CL:0002563!5.79e-20!9;CL:0002251!5.79e-20!9;CL:0000239!5.24e-15!6;CL:0000677!5.24e-15!6;CL:0000212!5.24e-15!6;CL:0000584!5.24e-15!6;CL:0000066!2.39e-13!25;CL:0000075!9.83e-13!7;CL:0002076!3.15e-11!15;CL:0000223!7.35e-10!20;CL:0000473!3.30e-08!3;CL:0000627!3.30e-08!3;CL:0000682!3.30e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.40e-48,6;CL:0000677,5.40e-48,6;CL:0000584,5.40e-48,6;CL:0000075,3.74e-41,7;CL:0002563,5.04e-32,9;CL:0002251,5.04e-32,9;CL:0000066,2.20e-25,25;CL:0000682,1.96e-24,3;CL:0002076,3.30e-19,15;CL:0000223,2.21e-14,20;CL:0000473,7.34e-11,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.05e-31!15;UBERON:0001242!1.11e-27!13;UBERON:0000060!1.11e-27!13;UBERON:0001262!1.11e-27!13;UBERON:0004786!1.11e-27!13;UBERON:0000160!5.02e-25!43;UBERON:0003350!5.79e-20!9;UBERON:0004808!5.79e-20!9;UBERON:0001277!5.79e-20!9;UBERON:0004923!2.13e-18!24;UBERON:0005409!3.04e-18!59;UBERON:0000485!5.44e-16!11;UBERON:0001007!6.91e-11!128;UBERON:0001555!6.91e-11!128;UBERON:0007026!6.91e-11!128;UBERON:0004119!1.32e-10!130;UBERON:0000925!1.32e-10!130;UBERON:0006595!1.32e-10!130;UBERON:0004921!3.11e-09!126;UBERON:0004185!3.11e-09!126;UBERON:0000331!2.87e-07!3;UBERON:0002116!2.87e-07!3;UBERON:0001204!2.87e-07!3;UBERON:0001168!2.87e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.04e-32,9;UBERON:0004808,5.04e-32,9;UBERON:0001277,5.04e-32,9;UBERON:0001242,6.43e-30,13;UBERON:0001262,6.43e-30,13;UBERON:0004786,6.43e-30,13;UBERON:0000485,3.32e-26,11;UBERON:0000344,6.61e-26,15;UBERON:0004923,4.23e-16,24;UBERON:0000160,4.40e-16,31;UBERON:0005409,1.94e-10,47;UBERON:0001153,3.65e-09,1;UBERON:0001045,3.65e-09,1 | |||
|phase1_expression=0,6.63053274514786,2.72999543633722,4.83942738090928,8.5152274090879,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.91763712426868,2.29692785646008,2.58457197695445,1.72376986148711,0.190023419456374,0.756090389279792,2.21730510655305,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.793351699990633,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.596869416123452,0.58489226135736,0.898819408654221,0.864552199498777,0.796565093017469,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:156931282..156931291,- | |||
}} |
Latest revision as of 01:12, 5 August 2015
Short description: | p@chr1:156931282..156931291, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:156931282..156931291, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.40e-48 | 6 |
gut absorptive cell | 5.40e-48 | 6 |
enterocyte | 5.40e-48 | 6 |
columnar/cuboidal epithelial cell | 3.74e-41 | 7 |
intestinal epithelial cell | 5.04e-32 | 9 |
epithelial cell of alimentary canal | 5.04e-32 | 9 |
epithelial cell | 2.20e-25 | 25 |
M cell of gut | 1.96e-24 | 3 |
endo-epithelial cell | 3.30e-19 | 15 |
endodermal cell | 2.21e-14 | 20 |
defensive cell | 7.34e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.04e-32 | 9 |
gastrointestinal system epithelium | 5.04e-32 | 9 |
intestinal epithelium | 5.04e-32 | 9 |
intestinal mucosa | 6.43e-30 | 13 |
wall of intestine | 6.43e-30 | 13 |
gastrointestinal system mucosa | 6.43e-30 | 13 |
simple columnar epithelium | 3.32e-26 | 11 |
mucosa | 6.61e-26 | 15 |
organ component layer | 4.23e-16 | 24 |
intestine | 4.40e-16 | 31 |
gastrointestinal system | 1.94e-10 | 47 |
caecum | 3.65e-09 | 1 |
midgut | 3.65e-09 | 1 |