FFCP PHASE1:Hg19::chr6:35465639..35465645,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:35465639..35465645,- | |||
|id=chr6:35465639..35465645,- | |||
|ontology_enrichment_celltype=CL:0000055!8.96e-17!180;CL:0000057!2.34e-11!75;CL:0000183!2.68e-11!59;CL:0000680!6.19e-11!57;CL:0000056!6.19e-11!57;CL:0000355!6.19e-11!57;CL:0000187!2.87e-09!54;CL:0000393!5.87e-08!60;CL:0000211!5.87e-08!60;CL:0002551!3.43e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002551;6.09e-15;6!CL:0002552;3.78e-12;5!CL:0002564;1.14e-10;3!CL:0002363;8.20e-09;2!CL:0002583;1.71e-08;2!CL:0000669;4.14e-08;4!CL:0002561;4.50e-08;2!CL:0002367;4.50e-08;2!CL:0002575;1.15e-07;2!CL:0002600;1.15e-07;2!CL:0002559;8.44e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,7.14e-15,6;CL:0002552,4.17e-12,5;CL:0002564,9.41e-11,3;CL:0002363,8.57e-09,2;CL:0000008,8.57e-09,2;CL:0002583,1.72e-08,2;CL:0000057,2.28e-08,76;CL:0002367,2.56e-08,2;CL:0002561,2.66e-08,2;CL:0000669,4.72e-08,4;CL:0002600,7.92e-08,2;CL:0002575,1.68e-07,2;CL:0002559,5.89e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000008;8.20e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.09e-17!83;UBERON:0002329!3.09e-17!83;UBERON:0003077!3.09e-17!83;UBERON:0003059!3.09e-17!83;UBERON:0007282!3.09e-17!83;UBERON:0009618!3.09e-17!83;UBERON:0007285!3.09e-17!83;UBERON:0004290!7.28e-15!70;UBERON:0005256!2.53e-13!143;UBERON:0000486!8.73e-13!82;UBERON:0001134!4.57e-11!61;UBERON:0002036!4.57e-11!61;UBERON:0003082!4.57e-11!61;UBERON:0002385!5.29e-11!63;UBERON:0001015!5.29e-11!63;UBERON:0000383!5.29e-11!63;UBERON:0003102!6.25e-11!95;UBERON:0002100!1.74e-09!216;UBERON:0000481!3.94e-09!347;UBERON:0003104!4.18e-09!238;UBERON:0009142!4.18e-09!238;UBERON:0000475!5.31e-09!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;9.48e-14;9!UBERON:0002242;1.14e-10;3!UBERON:0003891;6.14e-09;4!UBERON:0003566;8.20e-09;2!UBERON:0001777;8.20e-09;2!UBERON:0005933;4.50e-08;2!UBERON:0005969;4.50e-08;2!UBERON:0005942;4.50e-08;2!UBERON:0005932;4.50e-08;2!UBERON:0003956;4.50e-08;2!UBERON:0001828;1.39e-07;8!UBERON:0002072;4.87e-07;5!UBERON:0002073;8.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,1.01e-13,9;UBERON:0004016,1.01e-13,9;UBERON:0010083,1.01e-13,9;UBERON:0003102,7.93e-12,99;UBERON:0002242,9.41e-11,3;UBERON:0003068,9.41e-11,3;UBERON:0002328,9.41e-11,3;UBERON:0004880,9.41e-11,3;UBERON:0003891,5.42e-09,4;UBERON:0003566,8.57e-09,2;UBERON:0001777,8.57e-09,2;UBERON:0004923,1.41e-08,66;UBERON:0005969,2.56e-08,2;UBERON:0003956,2.56e-08,2;UBERON:0005933,2.66e-08,2;UBERON:0005942,2.66e-08,2;UBERON:0005932,2.66e-08,2;UBERON:0007503,1.45e-07,78;UBERON:0001828,1.47e-07,8;UBERON:0002329,1.77e-07,71;UBERON:0003059,1.77e-07,71;UBERON:0007282,1.77e-07,71;UBERON:0004290,1.77e-07,71;UBERON:0009618,1.77e-07,71;UBERON:0003077,2.49e-07,72;UBERON:0007285,2.49e-07,72;UBERON:0003104,3.10e-07,160;UBERON:0009142,3.10e-07,160;UBERON:0007524,3.46e-07,73;UBERON:0002199,4.27e-07,46;UBERON:0002416,4.27e-07,46;UBERON:0002072,5.42e-07,5;UBERON:0002073,5.89e-07,5;UBERON:0005086,5.89e-07,5 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0,0,0.446961094427288,0,0,1.26343974685366,0.783556884599516,0,0,0.218441372130172,0.527533956456907,0.618831764800233,0.662794751455832,0,0,0,0,0,0.816002764977012,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0.538842688278752,0.163461903113459,1.81628913173918,0.576175924479999,0.70296429550139,4.37024107562449,0.570471821544449,2.24173020827702,1.05691048779388,1.94247533241758,2.10676210053373,5.9204709663919,2.94802361548243,3.61640234115179,1.18800285728205,0.741800787835671,0,0,0.505008341862199,0.875829639103749,1.38532057742091,0,0,1.65261864797256,0.680593098960126,0.538168907066586,0.213557388818567,0,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.368199594569197,0,0.355009592516614,0,0.169560592310488,0,0,0,0.243947412259191,0,0.116193942869518,0.10366105501537,0,0,0,0,1.38134921352481,1.85747171212792,2.16563844500876,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0,3.58389135841357,5.19967392639789,0,0,0.469634776943287,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0.560655421726804,0.87192013766656,0.22001485746285,0.129271715757778,0,0,2.12750493267896,0,2.82928111688356,2.83698264046557,1.5985330740966,0,0.542621605391443,1.64648067356154,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,1.19812427745791,0,0,1.30303176000821,0.61642896765115,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,1.8403723757871,1.00034104211935,1.62759014219841,0,0.356857977594324,0.315404830067869,0.234282829985426,0.902838299183157,0,0,2.65690239414175,1.10621501125022,0.695068915744663,1.17480694477644,1.37257369524342,0,0,0,1.5156378572313,1.66435439510497,0.30239029332968,0.248107807818777,0,0,0,0,0,0,2.7757744884478,2.13074070375753,0.574890092096664,0,0.232420756919918,0.241718899183244,0.40101294060657,0.0920809889358963,0.34444334449382,1.27463817604702,1.96686622439136,0.451199612907412,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0.812839312631559,1.50506932156456,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0.574265537996172,0,0,0.676695028044854,0.154048617114644,0.15350367472613,2.34322173223702,0.429680979473094,0.435050081742686,1.02271952899321,0.445160178233687,0,0.192190067365106,1.40373983744043,0,0,0,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0,0,0.632758849437452,0.571890581771475,2.303080121802,0,0.636406495851874,0.78494864019923,0.719489830333259,0.274537029736055,0.235624804691373,0.404364963146632,0,0.421258456238981,0.48763373908959,0,0,1.09199929126389,0.141405431953713,0,0,0,1.31535265576129,1.73632660280006,1.31178950409327,0,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0.709522128141196,0,0.987884678879706,2.65631221636001,1.74967360122491,0,0,0,0.376575203107117,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.384751292518985,0,0,0.538545866458633,0,0,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15361907373044,0.199679000498991,0,0,0.201550417460179,0.360299883542404,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,1.26089131678717,0.996637174564964,0,0,0,0,0,0,0,0,0.653174720218818,1.19730191562487,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0.233713309847224,0,0.189403005275089,0.50313580350515,0,0,0.151230923763239,0.932623203496683,1.33069634990671,0,0,0.465788870628778,1.24411862352257,0,1.04349012362347,0.300515217994437,0.380805212168795,0.406870733204662,0.727394636810238,0.751873899297419,0.928067519756987,0.796191777397232,0,0,0,0,0,0,0.521988583930423,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,1.3807198521202,0,0.150420656698515,0.201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| |||
|short_description=p@chr6:35465639..35465645,- | |||
}} |
Revision as of 11:35, 22 January 2014
Short description: | p@chr6:35465639..35465645, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:35465639..35465645, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 7.14e-15 | 6 |
fibroblast of gingiva | 4.17e-12 | 5 |
nucleus pulposus cell of intervertebral disc | 9.41e-11 | 3 |
keratocyte | 8.57e-09 | 2 |
migratory cranial neural crest cell | 8.57e-09 | 2 |
subcutaneous preadipocyte | 1.72e-08 | 2 |
fibroblast | 2.28e-08 | 76 |
trabecular meshwork cell | 2.56e-08 | 2 |
outer root sheath cell | 2.66e-08 | 2 |
pericyte cell | 4.72e-08 | 4 |
smooth muscle cell of trachea | 7.92e-08 | 2 |
central nervous system pericyte | 1.68e-07 | 2 |
hair follicle cell | 5.89e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermis | 1.01e-13 | 9 |
dermatome | 1.01e-13 | 9 |
future dermis | 1.01e-13 | 9 |
surface structure | 7.93e-12 | 99 |
nucleus pulposus | 9.41e-11 | 3 |
axial mesoderm | 9.41e-11 | 3 |
notochord | 9.41e-11 | 3 |
chordamesoderm | 9.41e-11 | 3 |
stroma | 5.42e-09 | 4 |
head connective tissue | 8.57e-09 | 2 |
substantia propria of cornea | 8.57e-09 | 2 |
organ component layer | 1.41e-08 | 66 |
reticulum trabeculare | 2.56e-08 | 2 |
aqueous drainage system | 2.56e-08 | 2 |
hair root sheath | 2.66e-08 | 2 |
hair outer root sheath | 2.66e-08 | 2 |
bulb of hair follicle | 2.66e-08 | 2 |
epithelial vesicle | 1.45e-07 | 78 |
gingiva | 1.47e-07 | 8 |
somite | 1.77e-07 | 71 |
presomitic mesoderm | 1.77e-07 | 71 |
presumptive segmental plate | 1.77e-07 | 71 |
dermomyotome | 1.77e-07 | 71 |
trunk paraxial mesoderm | 1.77e-07 | 71 |
paraxial mesoderm | 2.49e-07 | 72 |
presumptive paraxial mesoderm | 2.49e-07 | 72 |
mesenchyme | 3.10e-07 | 160 |
entire embryonic mesenchyme | 3.10e-07 | 160 |
dense mesenchyme tissue | 3.46e-07 | 73 |
integument | 4.27e-07 | 46 |
integumental system | 4.27e-07 | 46 |
hypodermis | 5.42e-07 | 5 |
hair follicle | 5.89e-07 | 5 |
hair follicle placode | 5.89e-07 | 5 |