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FFCP PHASE1:Mm9::chr2:126501799..126501832,-: Difference between revisions

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{{FFCP|EntrezGene=14391|HGNC=|MCL_coexpression_id=7|UniProt=Q3UT69|association_with_transcript=240bp_to_ENSMUST00000039978,uc008mdy.1_5end|description=CAGE_peak_4_at_Gabpb1_5end|id=chr2:126501799..126501832,-|ontology_enrichment_celltype=CL:0000791!1.66e-08!9;CL:0000789!1.66e-08!9;CL:0002420!1.66e-08!9;CL:0002419!1.66e-08!9;CL:0000790!1.66e-08!9;CL:0000624!1.10e-07!8;CL:0000084!2.21e-07!11;CL:0000827!2.21e-07!11;CL:0000838!3.02e-07!12|ontology_enrichment_celltype_v019_2=CL:0000791,1.20e-28,9;CL:0000789,1.20e-28,9;CL:0002420,1.20e-28,9;CL:0002419,1.20e-28,9;CL:0000790,1.20e-28,9;CL:0000624,1.94e-25,8;CL:0000084,3.74e-23,11;CL:0000827,3.74e-23,11;CL:0000838,4.32e-21,12;CL:0000542,2.40e-19,13;CL:0000051,2.40e-19,13;CL:0000893,3.03e-19,6;CL:0002489,3.03e-19,6;CL:0000898,3.03e-19,6;CL:0000809,3.03e-19,6;CL:0000810,3.03e-19,6;CL:0000895,3.03e-19,6;CL:0000808,3.03e-19,6;CL:0000894,3.03e-19,6;CL:0000806,3.03e-19,6;CL:0000807,3.03e-19,6;CL:0000805,3.03e-19,6;CL:0002425,3.03e-19,6;CL:0002436,3.03e-19,6;CL:0002427,3.03e-19,6;CL:0002428,3.03e-19,6;CL:0002429,3.03e-19,6;CL:0002433,3.03e-19,6;CL:0002431,3.03e-19,6;CL:0002432,3.03e-19,6;CL:0000988,4.07e-19,32;CL:0002032,4.07e-19,32;CL:0000037,4.07e-19,32;CL:0000837,4.07e-19,32;CL:0000738,2.04e-14,17;CL:0002087,2.04e-14,17;CL:0002320,3.14e-14,46;CL:0000134,3.14e-14,46;CL:0000219,1.24e-11,54;CL:0000034,2.62e-11,97;CL:0002031,2.73e-09,25;CL:0000723,1.80e-08,91;CL:0000048,1.80e-08,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.35e-09,3;DOID:4045,2.35e-09,3|ontology_enrichment_uberon=UBERON:0006562!4.98e-07!24;UBERON:0001557!4.98e-07!24;UBERON:0001042!4.98e-07!24;UBERON:0008814!4.98e-07!24;UBERON:0009145!4.98e-07!24;UBERON:0000072!8.73e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.14e-14,46|phase1_expression=0.480446541314382,1.04692622291808,0,0.30246421130683,0,0.503637815735669,0.467225281191051,10.3298658753261,61.243094135975,43.3019373695688,3.93801326918661,2.15384829287408,9.24483941628511,8.04267702254776,0,0,0,0.315462165358238,0.137114433605739,0,3.74190476664707,0.297872853602656,0,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.665191531965914,0,0,0,0,0,0,2.51118978442145,3.1253413780952,2.09409497589519,11.1763982725893,4.78131839470912,3.39857247121808,0,0,0.550640256485045,0,0,0,0,0,0,0.167782606057736,28.2891235384424,30.9206295211067,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.365950574409639,0,0,0,0.15279824777681,0,0,0,0.605809546665472,0,0.869593466105033,0.860423876981386,3.39985666853875,0,0.649776417447669,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,0.68510327831436,0.517875767294343,0.148442139064825,0,0,0,0,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,0,0.41889341362691,0.255457055208591,2.99537811264801,1.79970819298022,2.28726408731516,0.149790639404823,0,0.251308704225729,0,0,0,0.162241263067758,0.203678727700633,0,0.252722758433675,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0.468508622798644,0,0.646703978798527,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,1.40442637462647,3.60287069960601,1.70498099637356,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0.210289948564127,0,0,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0.758671603812327,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0.923765950833023,0,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.478364305972461,0,0.345369963731791,0,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0.720244376125241,0.129358683782755,0.428674070063185,0.709360934569094,0.356737635204141,0.658196082408484,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0.328281799490123,0,0.18542530201051,0.170870880797853,0,0,0,0.136694227721025,0.228778173206523,11.728511669576,6.71766971153558,8.98299829728755,0,0.632671987162271,0,0.540026704109006,0,0,0.269728692769641,0.330613822901344,0,0,0,12.9649375897364,0.448549638131936,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0.13020438484395,0.419437377702843,0.966336483304024,8.06484017522023,0.632022241256357,0,0.205421914329655,0.25984164595559,0.358053391334963,0.198681354781265,0.240390899039938,0.738447635872886,0.706765149637033,0.533447646584999,0.403304740547362,0.292373642219257,0.288635524920988,0.584384510907845,0.453460767230423,0,0.179427713218951,0.167884616364078,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0.170733605754134,0,0.419226325255965,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.355905054372522,0,0,0,0,0,0,0.644613162144895,0.191288332068843,0,0|short_description=p4@Gabpb1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:14391
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=uniprot:Q3UT69
|association_with_transcript=240bp_to_ENSMUST00000039978,uc008mdy.1_5end
|cluster_id=chr2:126501799..126501832,-
|description=CAGE_peak_4_at_Gabpb1_5end
|id=chr2:126501799..126501832,-
|ontology_enrichment_celltype=CL:0000791!1.66e-08!9;CL:0000789!1.66e-08!9;CL:0002420!1.66e-08!9;CL:0002419!1.66e-08!9;CL:0000790!1.66e-08!9;CL:0000624!1.10e-07!8;CL:0000084!2.21e-07!11;CL:0000827!2.21e-07!11;CL:0000838!3.02e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000791,1.20e-28,9;CL:0000789,1.20e-28,9;CL:0002420,1.20e-28,9;CL:0002419,1.20e-28,9;CL:0000790,1.20e-28,9;CL:0000624,1.94e-25,8;CL:0000084,3.74e-23,11;CL:0000827,3.74e-23,11;CL:0000838,4.32e-21,12;CL:0000542,2.40e-19,13;CL:0000051,2.40e-19,13;CL:0000893,3.03e-19,6;CL:0002489,3.03e-19,6;CL:0000898,3.03e-19,6;CL:0000809,3.03e-19,6;CL:0000810,3.03e-19,6;CL:0000895,3.03e-19,6;CL:0000808,3.03e-19,6;CL:0000894,3.03e-19,6;CL:0000806,3.03e-19,6;CL:0000807,3.03e-19,6;CL:0000805,3.03e-19,6;CL:0002425,3.03e-19,6;CL:0002436,3.03e-19,6;CL:0002427,3.03e-19,6;CL:0002428,3.03e-19,6;CL:0002429,3.03e-19,6;CL:0002433,3.03e-19,6;CL:0002431,3.03e-19,6;CL:0002432,3.03e-19,6;CL:0000988,4.07e-19,32;CL:0002032,4.07e-19,32;CL:0000037,4.07e-19,32;CL:0000837,4.07e-19,32;CL:0000738,2.04e-14,17;CL:0002087,2.04e-14,17;CL:0002320,3.14e-14,46;CL:0000134,3.14e-14,46;CL:0000219,1.24e-11,54;CL:0000034,2.62e-11,97;CL:0002031,2.73e-09,25;CL:0000723,1.80e-08,91;CL:0000048,1.80e-08,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,2.35e-09,3;DOID:4045,2.35e-09,3
|ontology_enrichment_uberon=UBERON:0006562!4.98e-07!24;UBERON:0001557!4.98e-07!24;UBERON:0001042!4.98e-07!24;UBERON:0008814!4.98e-07!24;UBERON:0009145!4.98e-07!24;UBERON:0000072!8.73e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.14e-14,46
|phase1_expression=0.480446541314382,1.04692622291808,0,0.30246421130683,0,0.503637815735669,0.467225281191051,10.3298658753261,61.243094135975,43.3019373695688,3.93801326918661,2.15384829287408,9.24483941628511,8.04267702254776,0,0,0,0.315462165358238,0.137114433605739,0,3.74190476664707,0.297872853602656,0,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.665191531965914,0,0,0,0,0,0,2.51118978442145,3.1253413780952,2.09409497589519,11.1763982725893,4.78131839470912,3.39857247121808,0,0,0.550640256485045,0,0,0,0,0,0,0.167782606057736,28.2891235384424,30.9206295211067,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.365950574409639,0,0,0,0.15279824777681,0,0,0,0.605809546665472,0,0.869593466105033,0.860423876981386,3.39985666853875,0,0.649776417447669,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,0.68510327831436,0.517875767294343,0.148442139064825,0,0,0,0,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,0,0.41889341362691,0.255457055208591,2.99537811264801,1.79970819298022,2.28726408731516,0.149790639404823,0,0.251308704225729,0,0,0,0.162241263067758,0.203678727700633,0,0.252722758433675,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0.468508622798644,0,0.646703978798527,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,1.40442637462647,3.60287069960601,1.70498099637356,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0.210289948564127,0,0,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0.758671603812327,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0.923765950833023,0,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.478364305972461,0,0.345369963731791,0,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0.720244376125241,0.129358683782755,0.428674070063185,0.709360934569094,0.356737635204141,0.658196082408484,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0.328281799490123,0,0.18542530201051,0.170870880797853,0,0,0,0.136694227721025,0.228778173206523,11.728511669576,6.71766971153558,8.98299829728755,0,0.632671987162271,0,0.540026704109006,0,0,0.269728692769641,0.330613822901344,0,0,0,12.9649375897364,0.448549638131936,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0.13020438484395,0.419437377702843,0.966336483304024,8.06484017522023,0.632022241256357,0,0.205421914329655,0.25984164595559,0.358053391334963,0.198681354781265,0.240390899039938,0.738447635872886,0.706765149637033,0.533447646584999,0.403304740547362,0.292373642219257,0.288635524920988,0.584384510907845,0.453460767230423,0,0.179427713218951,0.167884616364078,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0.170733605754134,0,0.419226325255965,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.355905054372522,0,0,0,0,0,0,0.644613162144895,0.191288332068843,0,0
|short_description=p4@Gabpb1
}}

Revision as of 23:21, 3 August 2015

Short description:p4@Gabpb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Gabpb1_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 240bp_to_ENSMUST00000039978, uc008mdy.1_5end
EntrezGene:14391
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Gabpb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E761.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F243.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.24
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.04
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I928.29
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A130.92
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.98
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G512.96
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.20e-289
alpha-beta T cell1.20e-289
immature T cell1.20e-289
mature T cell1.20e-289
immature alpha-beta T cell1.20e-289
CD4-positive, alpha-beta T cell1.94e-258
T cell3.74e-2311
pro-T cell3.74e-2311
lymphoid lineage restricted progenitor cell4.32e-2112
lymphocyte2.40e-1913
common lymphoid progenitor2.40e-1913
thymocyte3.03e-196
double negative thymocyte3.03e-196
naive T cell3.03e-196
double-positive, alpha-beta thymocyte3.03e-196
CD4-positive, alpha-beta thymocyte3.03e-196
naive thymus-derived CD4-positive, alpha-beta T cell3.03e-196
DN4 thymocyte3.03e-196
DN1 thymic pro-T cell3.03e-196
DN2 thymocyte3.03e-196
DN3 thymocyte3.03e-196
immature single positive thymocyte3.03e-196
early T lineage precursor3.03e-196
mature CD4 single-positive thymocyte3.03e-196
resting double-positive thymocyte3.03e-196
double-positive blast3.03e-196
CD69-positive double-positive thymocyte3.03e-196
CD69-positive, CD4-positive single-positive thymocyte3.03e-196
CD4-positive, CD8-intermediate double-positive thymocyte3.03e-196
CD24-positive, CD4 single-positive thymocyte3.03e-196
hematopoietic cell4.07e-1932
hematopoietic oligopotent progenitor cell4.07e-1932
hematopoietic stem cell4.07e-1932
hematopoietic multipotent progenitor cell4.07e-1932
leukocyte2.04e-1417
nongranular leukocyte2.04e-1417
connective tissue cell3.14e-1446
mesenchymal cell3.14e-1446
motile cell1.24e-1154
stem cell2.62e-1197
hematopoietic lineage restricted progenitor cell2.73e-0925
somatic stem cell1.80e-0891
multi fate stem cell1.80e-0891

Uber anatomy
Ontology termp-valuen
connective tissue3.14e-1446

Disease
Ontology termp-valuen
musculoskeletal system cancer2.35e-093
muscle cancer2.35e-093
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