FFCP PHASE1:Hg19::chr8:19614875..19614884,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24290 | |||
|TSSclassifier=strong | |||
|UniProt=E5RGK2 | |||
|association_with_transcript=-59bp_to_ENST00000524213_5end | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_15_at_CSGALNACT1_5end | |||
|id=chr8:19614875..19614884,- | |||
|ontology_enrichment_celltype=CL:0000071!3.53e-08!18;CL:0002546!3.53e-08!18;CL:0002139!5.86e-07!24;CL:0000775!8.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002591;3.28e-23;1!CL:0000771;2.59e-12;2!CL:0000094;4.67e-12;8!CL:0000081;5.00e-09;11!CL:0000775;8.96e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.10e-23,1;CL:0000771,2.07e-12,2;CL:0000094,4.18e-12,8;CL:0000081,4.61e-09,11;CL:0000775,8.96e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.03e-18;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.31e-12!115;UBERON:0001049!1.48e-09!57;UBERON:0005068!1.48e-09!57;UBERON:0006241!1.48e-09!57;UBERON:0007135!1.48e-09!57;UBERON:0002020!2.61e-09!34;UBERON:0003528!2.61e-09!34;UBERON:0001893!3.91e-09!34;UBERON:0001869!1.18e-08!32;UBERON:0002791!2.07e-08!33;UBERON:0001017!2.65e-08!82;UBERON:0005743!2.78e-08!86;UBERON:0001986!3.53e-08!18;UBERON:0004638!3.53e-08!18;UBERON:0004852!3.53e-08!18;UBERON:0002616!4.70e-08!59;UBERON:0002619!5.35e-08!22;UBERON:0002780!7.48e-08!41;UBERON:0001890!7.48e-08!41;UBERON:0006240!7.48e-08!41;UBERON:0000073!1.41e-07!94;UBERON:0001016!1.41e-07!94;UBERON:0000955!1.41e-07!69;UBERON:0006238!1.41e-07!69;UBERON:0003080!1.43e-07!42;UBERON:0001950!1.82e-07!20;UBERON:0003075!5.07e-07!86;UBERON:0007284!5.07e-07!86;UBERON:0000956!9.32e-07!25;UBERON:0000203!9.32e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.03e-18;5!UBERON:0000078;2.59e-12;2!UBERON:0002012;2.59e-12;2!UBERON:0008886;2.59e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009722,1.24e-18,11;UBERON:0007690,1.24e-18,11;UBERON:0002046,1.35e-18,5;UBERON:0004117,1.35e-18,5;UBERON:0007689,1.35e-18,5;UBERON:0007123,1.35e-18,5;UBERON:0003091,1.35e-18,5;UBERON:0000078,2.90e-12,2;UBERON:0007497,2.90e-12,2;UBERON:0003643,2.90e-12,2;UBERON:0003504,2.90e-12,2;UBERON:0003469,2.90e-12,2;UBERON:0003496,2.90e-12,2;UBERON:0002012,2.90e-12,2;UBERON:0008886,2.90e-12,2;UBERON:0007303,2.90e-12,2;UBERON:0002061,2.90e-12,2;UBERON:0005432,2.90e-12,2;UBERON:0004363,2.90e-12,2;UBERON:0008814,1.15e-11,18;UBERON:0004145,1.30e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,1.14950487990897,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0,0.328875809207352,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,0,0,1.33888245105868,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0.898117490504679,0.450445921933289,0,0.949265659568129,0,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,1.23633464639278,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.441175890929576,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0.24538298343828,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0.10893846351899,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.522109747527277,0.202203398942031,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0.126621591911757,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.425246896606173,0,0,0.104909176269996,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.387848869084652,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0.82046545696302,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,1.09394961803644,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0.197318320688547,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0.872701380680755,0.5290268405154,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,1.01835453245064,8.89315631416165,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@CSGALNACT1 | |||
}} |
Revision as of 20:56, 22 January 2014
Short description: | p15@CSGALNACT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CSGALNACT1_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | -59bp_to_ENST00000524213_5end |
EntrezGene: | CSGALNACT1 |
HGNC: | 24290 |
UniProt: | E5RGK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.10e-23 | 1 |
eosinophil | 2.07e-12 | 2 |
granulocyte | 4.18e-12 | 8 |
blood cell | 4.61e-09 | 11 |
neutrophil | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
entire pharyngeal arch endoderm | 1.24e-18 | 11 |
early pharyngeal endoderm | 1.24e-18 | 11 |
thyroid gland | 1.35e-18 | 5 |
pharyngeal pouch | 1.35e-18 | 5 |
thyroid diverticulum | 1.35e-18 | 5 |
pharyngeal pouch 2 | 1.35e-18 | 5 |
thyroid primordium | 1.35e-18 | 5 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.90e-12 | 2 |
developing epithelial placode | 2.90e-12 | 2 |
respiratory system arterial blood vessel | 2.90e-12 | 2 |
respiratory system blood vessel | 2.90e-12 | 2 |
respiratory system artery | 2.90e-12 | 2 |
head blood vessel | 2.90e-12 | 2 |
pulmonary artery | 2.90e-12 | 2 |
pulmonary vascular system | 2.90e-12 | 2 |
pharyngeal vasculature | 2.90e-12 | 2 |
truncus arteriosus | 2.90e-12 | 2 |
aortic sac | 2.90e-12 | 2 |
pharyngeal arch artery | 2.90e-12 | 2 |
pharyngeal arch system | 1.15e-11 | 18 |
outflow tract | 1.30e-08 | 3 |