FFCP PHASE1:Mm9::chr5:89013024..89013030,+: Difference between revisions
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{{FFCP|EntrezGene=52822|HGNC=|UniProt=Q9D394|association_with_transcript=425bp_to_ENSMUST00000031229,ENSMUST00000087029,NM_027530,uc008xzz.1,uc008yaa.1_5end|description=CAGE_peak_13_at_Rufy3_5end|id=chr5:89013024..89013030,+|ontology_enrichment_celltype=CL:0000117!3.29e-22!23;CL:0000337!3.29e-22!23;CL:0000540!8.96e-14!33;CL:0000047!8.96e-14!33;CL:0000031!8.96e-14!33;CL:0000404!8.96e-14!33;CL:0000393!4.32e-12!39;CL:0000211!4.32e-12!39;CL:0002319!1.66e-10!43;CL:0000221!3.84e-10!44;CL:0000133!3.84e-10!44;CL:0000055!2.97e-09!50|ontology_enrichment_celltype_v019_2=CL:0002608,3.89e-20,3;CL:0002614,3.89e-20,3;CL:0000117,3.39e-16,23;CL:0000337,3.39e-16,23;CL:0000540,1.95e-11,33;CL:0000047,1.95e-11,33;CL:0000031,1.95e-11,33;CL:0000404,1.95e-11,33;CL:0002609,1.33e-10,6;CL:0000393,9.67e-10,39;CL:0000211,9.67e-10,39;CL:0002319,7.17e-09,43;CL:0000221,1.12e-08,44;CL:0000133,1.12e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.11e-24!52;UBERON:0005068!2.11e-24!52;UBERON:0006241!2.11e-24!52;UBERON:0007135!2.11e-24!52;UBERON:0002346!2.90e-23!71;UBERON:0003075!2.90e-23!71;UBERON:0007284!2.90e-23!71;UBERON:0002616!1.71e-20!49;UBERON:0000033!1.95e-20!63;UBERON:0002020!2.52e-20!34;UBERON:0001017!2.85e-20!73;UBERON:0005743!2.85e-20!73;UBERON:0000955!6.48e-20!50;UBERON:0006238!6.48e-20!50;UBERON:0000073!1.85e-19!75;UBERON:0001016!1.85e-19!75;UBERON:0004121!1.35e-17!102;UBERON:0000924!1.35e-17!102;UBERON:0006601!1.35e-17!102;UBERON:0003056!1.03e-16!49;UBERON:0007811!1.39e-16!86;UBERON:0002791!5.65e-16!29;UBERON:0003528!5.65e-16!29;UBERON:0001893!5.65e-16!29;UBERON:0003080!2.56e-14!40;UBERON:0000153!2.62e-14!94;UBERON:0002780!1.83e-13!39;UBERON:0001890!1.83e-13!39;UBERON:0006240!1.83e-13!39;UBERON:0003076!1.02e-11!12;UBERON:0003057!1.02e-11!12;UBERON:0002420!1.94e-09!8;UBERON:0007245!1.94e-09!8;UBERON:0010009!1.94e-09!8;UBERON:0010011!1.94e-09!8;UBERON:0000454!1.94e-09!8;UBERON:0002298!2.32e-09!6;UBERON:0000956!9.99e-09!21;UBERON:0001869!9.99e-09!21;UBERON:0000203!9.99e-09!21;UBERON:0002240!4.19e-07!6;UBERON:0005174!4.19e-07!6;UBERON:0001137!4.19e-07!6;UBERON:0000025!4.92e-07!114;UBERON:0002950!5.20e-07!4;UBERON:0001891!5.20e-07!4;UBERON:0009616!5.20e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.89e-20,3;UBERON:0009663,3.89e-20,3;UBERON:0009661,3.89e-20,3;UBERON:0000125,3.89e-20,3;UBERON:0002308,3.89e-20,3;UBERON:0003528,1.94e-18,29;UBERON:0002791,1.94e-18,29;UBERON:0001893,1.94e-18,29;UBERON:0002420,4.11e-17,8;UBERON:0007245,4.11e-17,8;UBERON:0010009,4.11e-17,8;UBERON:0010011,4.11e-17,8;UBERON:0000454,4.11e-17,8;UBERON:0002020,8.43e-16,34;UBERON:0002950,2.21e-15,4;UBERON:0001891,2.21e-15,4;UBERON:0009616,2.21e-15,4;UBERON:0010286,2.21e-15,4;UBERON:0002780,7.80e-14,39;UBERON:0001890,7.80e-14,39;UBERON:0006240,7.80e-14,39;UBERON:0003080,1.69e-13,40;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0003056,4.27e-11,49;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0001954,3.15e-09,7;UBERON:0003022,3.15e-09,7;UBERON:0002421,3.15e-09,7;UBERON:0000349,3.15e-09,7;UBERON:0002600,3.15e-09,7;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0002619,1.98e-08,17;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000956,5.98e-07,21;UBERON:0001869,5.98e-07,21;UBERON:0000203,5.98e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0.699561878128147,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,0,0,1.72521847832825,1.83843757322004,0,0.638436690425939,0.153606533256243,0.131886287730194,4.11694396210843,0.52091337055676,0.279182999001381,2.25105044012672,1.06958773443767,0.883885756421003,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0.62336413367868,0.324482526135515,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,2.74033007908257,0,0,0.45032120322422,0,0,0.207574695168353,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p13@Rufy3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:52822 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D394 | |||
|association_with_transcript=425bp_to_ENSMUST00000031229,ENSMUST00000087029,NM_027530,uc008xzz.1,uc008yaa.1_5end | |||
|cluster_id=chr5:89013024..89013030,+ | |||
|description=CAGE_peak_13_at_Rufy3_5end | |||
|id=chr5:89013024..89013030,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.29e-22!23;CL:0000337!3.29e-22!23;CL:0000540!8.96e-14!33;CL:0000047!8.96e-14!33;CL:0000031!8.96e-14!33;CL:0000404!8.96e-14!33;CL:0000393!4.32e-12!39;CL:0000211!4.32e-12!39;CL:0002319!1.66e-10!43;CL:0000221!3.84e-10!44;CL:0000133!3.84e-10!44;CL:0000055!2.97e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,3.89e-20,3;CL:0002614,3.89e-20,3;CL:0000117,3.39e-16,23;CL:0000337,3.39e-16,23;CL:0000540,1.95e-11,33;CL:0000047,1.95e-11,33;CL:0000031,1.95e-11,33;CL:0000404,1.95e-11,33;CL:0002609,1.33e-10,6;CL:0000393,9.67e-10,39;CL:0000211,9.67e-10,39;CL:0002319,7.17e-09,43;CL:0000221,1.12e-08,44;CL:0000133,1.12e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.11e-24!52;UBERON:0005068!2.11e-24!52;UBERON:0006241!2.11e-24!52;UBERON:0007135!2.11e-24!52;UBERON:0002346!2.90e-23!71;UBERON:0003075!2.90e-23!71;UBERON:0007284!2.90e-23!71;UBERON:0002616!1.71e-20!49;UBERON:0000033!1.95e-20!63;UBERON:0002020!2.52e-20!34;UBERON:0001017!2.85e-20!73;UBERON:0005743!2.85e-20!73;UBERON:0000955!6.48e-20!50;UBERON:0006238!6.48e-20!50;UBERON:0000073!1.85e-19!75;UBERON:0001016!1.85e-19!75;UBERON:0004121!1.35e-17!102;UBERON:0000924!1.35e-17!102;UBERON:0006601!1.35e-17!102;UBERON:0003056!1.03e-16!49;UBERON:0007811!1.39e-16!86;UBERON:0002791!5.65e-16!29;UBERON:0003528!5.65e-16!29;UBERON:0001893!5.65e-16!29;UBERON:0003080!2.56e-14!40;UBERON:0000153!2.62e-14!94;UBERON:0002780!1.83e-13!39;UBERON:0001890!1.83e-13!39;UBERON:0006240!1.83e-13!39;UBERON:0003076!1.02e-11!12;UBERON:0003057!1.02e-11!12;UBERON:0002420!1.94e-09!8;UBERON:0007245!1.94e-09!8;UBERON:0010009!1.94e-09!8;UBERON:0010011!1.94e-09!8;UBERON:0000454!1.94e-09!8;UBERON:0002298!2.32e-09!6;UBERON:0000956!9.99e-09!21;UBERON:0001869!9.99e-09!21;UBERON:0000203!9.99e-09!21;UBERON:0002240!4.19e-07!6;UBERON:0005174!4.19e-07!6;UBERON:0001137!4.19e-07!6;UBERON:0000025!4.92e-07!114;UBERON:0002950!5.20e-07!4;UBERON:0001891!5.20e-07!4;UBERON:0009616!5.20e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.89e-20,3;UBERON:0009663,3.89e-20,3;UBERON:0009661,3.89e-20,3;UBERON:0000125,3.89e-20,3;UBERON:0002308,3.89e-20,3;UBERON:0003528,1.94e-18,29;UBERON:0002791,1.94e-18,29;UBERON:0001893,1.94e-18,29;UBERON:0002420,4.11e-17,8;UBERON:0007245,4.11e-17,8;UBERON:0010009,4.11e-17,8;UBERON:0010011,4.11e-17,8;UBERON:0000454,4.11e-17,8;UBERON:0002020,8.43e-16,34;UBERON:0002950,2.21e-15,4;UBERON:0001891,2.21e-15,4;UBERON:0009616,2.21e-15,4;UBERON:0010286,2.21e-15,4;UBERON:0002780,7.80e-14,39;UBERON:0001890,7.80e-14,39;UBERON:0006240,7.80e-14,39;UBERON:0003080,1.69e-13,40;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0003056,4.27e-11,49;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0001954,3.15e-09,7;UBERON:0003022,3.15e-09,7;UBERON:0002421,3.15e-09,7;UBERON:0000349,3.15e-09,7;UBERON:0002600,3.15e-09,7;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0002619,1.98e-08,17;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000956,5.98e-07,21;UBERON:0001869,5.98e-07,21;UBERON:0000203,5.98e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0.699561878128147,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,0,0,1.72521847832825,1.83843757322004,0,0.638436690425939,0.153606533256243,0.131886287730194,4.11694396210843,0.52091337055676,0.279182999001381,2.25105044012672,1.06958773443767,0.883885756421003,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0.62336413367868,0.324482526135515,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,2.74033007908257,0,0,0.45032120322422,0,0,0.207574695168353,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p13@Rufy3 | |||
}} |
Revision as of 17:21, 4 August 2015
Short description: | p13@Rufy3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Rufy3_5end |
Coexpression cluster: | NA |
Association with transcript: | 425bp_to_ENSMUST00000031229, ENSMUST00000087029, NM_027530, uc008xzz.1, uc008yaa.1_5end |
EntrezGene: | 52822 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 3.89e-20 | 3 |
neuron of the substantia nigra | 3.89e-20 | 3 |
CNS neuron (sensu Vertebrata) | 3.39e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.39e-16 | 23 |
neuron | 1.95e-11 | 33 |
neuronal stem cell | 1.95e-11 | 33 |
neuroblast | 1.95e-11 | 33 |
electrically signaling cell | 1.95e-11 | 33 |
neuron of cerebral cortex | 1.33e-10 | 6 |
electrically responsive cell | 9.67e-10 | 39 |
electrically active cell | 9.67e-10 | 39 |
neural cell | 7.17e-09 | 43 |
ectodermal cell | 1.12e-08 | 44 |
neurectodermal cell | 1.12e-08 | 44 |