FFCP PHASE1:Hg19::chr9:139922726..139922738,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=20 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZC7 | |||
|association_with_transcript=1bp_to_ENST00000265662,ENST00000371605,NM_001606,uc004ckl.1,uc011mel.1,uc011mem.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_ABCA2_5end | |||
|id=chr9:139922726..139922738,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.19e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.34e-26!94;UBERON:0001016!2.34e-26!94;UBERON:0005743!1.43e-25!86;UBERON:0001049!2.97e-24!57;UBERON:0005068!2.97e-24!57;UBERON:0006241!2.97e-24!57;UBERON:0007135!2.97e-24!57;UBERON:0001017!3.47e-24!82;UBERON:0000955!1.25e-23!69;UBERON:0006238!1.25e-23!69;UBERON:0002616!9.66e-21!59;UBERON:0002346!2.60e-20!90;UBERON:0003075!2.90e-20!86;UBERON:0007284!2.90e-20!86;UBERON:0003080!1.97e-17!42;UBERON:0000924!1.99e-17!173;UBERON:0006601!1.99e-17!173;UBERON:0002780!2.52e-17!41;UBERON:0001890!2.52e-17!41;UBERON:0006240!2.52e-17!41;UBERON:0004121!3.75e-17!169;UBERON:0001893!4.21e-16!34;UBERON:0002020!4.33e-16!34;UBERON:0003528!4.33e-16!34;UBERON:0002791!1.64e-15!33;UBERON:0007023!6.16e-15!115;UBERON:0001869!8.93e-15!32;UBERON:0000033!9.02e-15!123;UBERON:0000153!1.16e-14!129;UBERON:0007811!1.16e-14!129;UBERON:0003056!1.23e-13!61;UBERON:0002619!1.47e-11!22;UBERON:0000956!2.11e-10!25;UBERON:0000203!2.11e-10!25;UBERON:0001950!2.13e-10!20;UBERON:0000025!4.02e-10!194;UBERON:0000475!6.17e-10!365;UBERON:0004111!1.12e-08!241;UBERON:0003076!4.80e-08!15;UBERON:0003057!4.80e-08!15;UBERON:0002308!1.58e-07!9;UBERON:0000125!1.58e-07!9;UBERON:0002420!1.69e-07!9;UBERON:0007245!1.69e-07!9;UBERON:0010009!1.69e-07!9;UBERON:0010011!1.69e-07!9;UBERON:0000454!1.69e-07!9;UBERON:0000477!1.84e-07!286;UBERON:0004732!7.45e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.93e-26;34!UBERON:0003528;4.07e-25;34!UBERON:0002020;4.07e-25;34!UBERON:0002791;1.30e-24;32!UBERON:0001869;1.97e-24;32!UBERON:0002780;5.73e-24;41!UBERON:0001890;5.73e-24;41!UBERON:0000073;2.96e-23;53!UBERON:0002616;2.96e-23;53!UBERON:0002619;9.38e-23;22!UBERON:0001950;1.48e-20;20!UBERON:0000956;3.14e-19;25!UBERON:0000203;3.14e-19;25!UBERON:0000955;5.36e-17;68!UBERON:0001017;3.59e-16;75!UBERON:0001016;1.06e-14;83!UBERON:0000125;4.32e-13;9!UBERON:0002308;4.32e-13;9!UBERON:0002420;6.18e-13;9!UBERON:0007245;6.18e-13;9!UBERON:0010009;6.18e-13;9!UBERON:0010011;6.18e-13;9!UBERON:0000454;6.18e-13;9!UBERON:0009663;1.27e-10;7!UBERON:0004732;3.39e-09;13!UBERON:0002298;2.90e-08;6!UBERON:0004733;5.46e-08;12!UBERON:0002028;5.46e-08;12!UBERON:0002021;6.78e-08;5!UBERON:0000349;1.73e-07;5!UBERON:0007023;2.55e-07;114!UBERON:0001872;3.95e-07;5!UBERON:0001871;6.76e-07;6!UBERON:0000369;7.76e-07;4!UBERON:0002435;7.76e-07;4!UBERON:0000204;7.76e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.12e-44,56;UBERON:0005068,3.12e-44,56;UBERON:0006241,3.12e-44,56;UBERON:0007135,3.12e-44,56;UBERON:0000073,1.79e-40,53;UBERON:0002616,1.79e-40,53;UBERON:0001017,5.25e-38,81;UBERON:0000955,4.52e-37,68;UBERON:0006238,4.52e-37,68;UBERON:0001016,1.22e-36,89;UBERON:0002780,2.28e-33,41;UBERON:0001890,2.28e-33,41;UBERON:0003080,2.28e-33,41;UBERON:0006240,2.28e-33,41;UBERON:0003075,1.52e-32,82;UBERON:0007284,1.52e-32,82;UBERON:0002346,1.50e-31,86;UBERON:0001893,9.09e-31,34;UBERON:0003528,9.61e-31,34;UBERON:0002020,9.61e-31,34;UBERON:0002791,2.80e-28,32;UBERON:0001869,3.71e-28,32;UBERON:0010371,7.79e-26,104;UBERON:0003056,1.32e-23,61;UBERON:0002619,3.98e-23,22;UBERON:0001950,7.82e-21,20;UBERON:0010314,1.53e-20,132;UBERON:0004121,7.80e-20,171;UBERON:0000924,7.80e-20,171;UBERON:0006601,7.80e-20,171;UBERON:0007023,8.15e-20,114;UBERON:0000956,1.50e-19,25;UBERON:0000203,1.50e-19,25;UBERON:0011216,5.03e-14,223;UBERON:0000025,5.65e-14,192;UBERON:0000125,3.48e-13,9;UBERON:0002308,3.48e-13,9;UBERON:0002420,3.98e-13,9;UBERON:0007245,3.98e-13,9;UBERON:0010009,3.98e-13,9;UBERON:0010011,3.98e-13,9;UBERON:0000454,3.98e-13,9;UBERON:0003076,1.01e-11,15;UBERON:0003057,1.01e-11,15;UBERON:0009663,1.04e-10,7;UBERON:0004732,1.65e-09,13;UBERON:0004111,4.12e-09,240;UBERON:0002298,1.83e-08,6;UBERON:0004733,2.72e-08,12;UBERON:0002028,2.72e-08,12;UBERON:0007277,2.72e-08,12;UBERON:0002021,7.70e-08,5;UBERON:0000349,1.08e-07,5;UBERON:0001872,3.42e-07,5;UBERON:0001871,3.64e-07,6;UBERON:0000369,6.92e-07,4;UBERON:0002435,6.92e-07,4;UBERON:0000204,6.92e-07,4;UBERON:0010082,6.92e-07,4 | |||
|phase1_expression=1.09007027562334,1.71280419112787,0.281908808191942,0,0.893922188854576,0,0,3.15859936713415,0.783556884599516,0.245733936501509,0,0.218441372130172,0.527533956456907,0.247532705920093,0.662794751455832,0,0,0.730310090387373,0,0.123121058076788,0.612002073732759,0.940364164434263,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0.880801318004542,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0.852449501065388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,1.12101712596307,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.445641827540694,0,0,0.270803863765016,0.128091319725675,0,0.328875809207352,0.276350017785848,0.869409257205157,0.296573126324121,0,2.09071047609954,0.226618685395132,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0.473554504088034,0,0.403213486449465,1.06976078313403,0.434473211648397,0,0,0.12786256184353,1.0843174571537,0,1.01392563272577,0,1.94653948121054,0.378139268656271,0.443458794925128,0.351339142772504,1.24430121722827,0,0,0.324547393654683,0.696518949197069,0.398873881556595,0,0.571994910780128,0,0.198762407366705,0.860234595106124,0,0.56530794192401,1.25849830862972,0.550236083880135,0.417989933073621,0.516833518338658,0.71153252537342,1.67360306382335,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.267899184852239,0,0.112611480483322,0,0,0.916008719652036,0,0,0.436094052142534,0.496971951695318,0.633152558322899,0.794455084879313,0.286836620748814,1.41867352879343,0,2.1349799145941,0.74000264525148,0,0,0.490385709340376,0.756787138224657,0.576175924479999,0.468642863667593,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.413303124703062,0,0.741800787835671,0,0.718618141816238,0,0,0.277064115484183,1.75591048352335,0,0.600952235626387,0.226864366320042,1.07633781413317,0.213557388818567,0.211931901159562,0.300091096084402,0.412210116953756,0,1.67505170698431,0.843881661206331,0.292311015483596,0,0.460249493211497,0.646584227275248,0,0.705264687593482,0.339121184620975,0.193260853163297,0,0,0,0.265059536642971,0.232387885739037,0.207322110030741,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0,0,0.196221465125346,0,0,2.80483547606892,0,2.94017422771084,0,0.982827216677626,0,0,0.245976877086227,0.171567810298526,0,1.1240175325762,0,0.185176890317059,0,0,0,0.927443239800615,0.70445216541493,0.288732895522148,0.462985512576611,0,0.790204397959275,0,0,0.234004265139238,0.445893486866185,0,0,0,0.268675568108545,0.290633938513962,0,0,0.528290604079356,0.829312462163088,0.144119953416961,0.88369703398466,1.26995788584338,2.29193055334967,1.17217447210047,0,0.719792448923265,0,0.571652865261156,0.336393253036082,0,0.2933531432838,0.646358578788889,0,0,0.531876233169741,1.04007436911366,0.514414748524284,1.41849132023278,1.0656887160644,0.142977993658148,1.62786481617433,0,0,1.06617584622764,0,0.301439377059586,0,0.499864955910285,0,1.00451418286425,0,0,0,0,0.579125226670317,1.2328579353023,0.179060963239896,0.784596007954691,0.197030760201927,0.646882724578552,0.128343036279748,0.76228387266739,0,0.773288812777695,1.34013012267479,2.55175500661265,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0.623912584592421,0.178428988797162,0.473107245101804,0.468565659970853,0.902838299183157,2.27407504055985,2.0694614258501,0.664225598535437,0.921845842708516,0.434418072340414,2.34961388955289,3.43143423810856,0.413536052245775,0,0.426910231213777,0,0,0,0.744323423456331,1.07423381301644,1.12264037773229,1.40953064181271,1.53512174720011,1.28683136914886,1.48418066444991,0.154209693802656,0.532685175939381,0.164254312027618,0.519254429183621,0.232420756919918,0.241718899183244,0.200506470303285,0.0920809889358963,0.114814448164607,0.364182336013434,0.524497659837696,0,0,0.784349769176855,0,0.527758144464379,0,0.340187410553031,0.215915916102139,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0,0,0,0.769350375349168,1.31205858279882,1.30151357865721,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0.676695028044854,0.308097234229289,0,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,0.356128142586949,0,0.384380134730212,0.638063562472921,0,0,1.5740617341532,2.0911118104818,1.23213432070436,0.532306030317022,0,0.37064843820784,0.429374660225974,0,0.949138274156178,0,0.767693373934002,0,0.636406495851874,1.56989728039846,0.179872457583315,0,0.117812402345686,0.202182481573316,1.58510321173008,0.842516912477962,0.48763373908959,0.243713489631284,1.05650146756755,0.545999645631943,0.424216295861138,1.13008116620243,2.2054613741845,0.66343897524122,0,0.578775534266688,0,0.811641507850816,0.30982349809975,0.563391205064483,0.143411352204052,0.392996164052485,0.3566710514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| |||
|short_description=p5@ABCA2 | |||
}} |
Revision as of 04:15, 23 January 2014
Short description: | p5@ABCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABCA2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 1bp_to_ENST00000265662, ENST00000371605, NM_001606, uc004ckl.1, uc011mel.1, uc011mem.1_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | Q9BZC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data