FFCP PHASE1:Hg19::chr9:2621950..2621957,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7436 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12698 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VVF8 | |||
|association_with_transcript=-17bp_to_ENST00000382096_5end | |||
|description=CAGE_peak_9_at_VLDLR_5end | |||
|id=chr9:2621950..2621957,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.33e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.94e-09,15 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.25e-09;1!UBERON:0004140;1.25e-09;1!UBERON:0005425;1.25e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;1.25e-09;1!DOID:10165;1.25e-09;1!DOID:1798;1.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.08e-09,1;DOID:10165,2.08e-09,1;DOID:1798,2.08e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002020!6.47e-15!34;UBERON:0003528!6.47e-15!34;UBERON:0002791!2.15e-14!33;UBERON:0001893!1.00e-13!34;UBERON:0007023!3.21e-13!115;UBERON:0001049!3.46e-13!57;UBERON:0005068!3.46e-13!57;UBERON:0006241!3.46e-13!57;UBERON:0007135!3.46e-13!57;UBERON:0002780!1.64e-12!41;UBERON:0001890!1.64e-12!41;UBERON:0006240!1.64e-12!41;UBERON:0003075!2.59e-12!86;UBERON:0007284!2.59e-12!86;UBERON:0003080!5.32e-12!42;UBERON:0001869!5.39e-12!32;UBERON:0002346!8.21e-12!90;UBERON:0005743!2.61e-11!86;UBERON:0000073!3.85e-11!94;UBERON:0001016!3.85e-11!94;UBERON:0001017!3.92e-11!82;UBERON:0002616!2.01e-10!59;UBERON:0003056!5.66e-10!61;UBERON:0000956!1.08e-08!25;UBERON:0000203!1.08e-08!25;UBERON:0000955!1.29e-08!69;UBERON:0006238!1.29e-08!69;UBERON:0002308!1.45e-08!9;UBERON:0000125!1.45e-08!9;UBERON:0009663!4.70e-07!7;UBERON:0002619!6.95e-07!22;UBERON:0001950!7.29e-07!20;UBERON:0004121!8.08e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.25e-09;1!UBERON:0002038;1.25e-09;1!UBERON:0000941;1.25e-09;1!UBERON:0001785;1.25e-09;1!UBERON:0002464;1.25e-09;1!UBERON:0004904;1.25e-09;1!UBERON:0001021;1.25e-09;1!UBERON:0009661;1.25e-09;1!UBERON:0002082;1.25e-09;1!UBERON:0002950;1.25e-09;1!UBERON:0001891;1.25e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,5.79e-10,1;UBERON:0002082,5.79e-10,1;UBERON:0010226,5.79e-10,1;UBERON:0000941,7.50e-10,1;UBERON:0001785,7.50e-10,1;UBERON:0002464,7.50e-10,1;UBERON:0004904,7.50e-10,1;UBERON:0001021,7.50e-10,1;UBERON:0003902,7.50e-10,1;UBERON:0005425,7.50e-10,1;UBERON:0002038,1.76e-09,1;UBERON:0009661,1.76e-09,1;UBERON:0002950,1.76e-09,1;UBERON:0001891,1.76e-09,1;UBERON:0009616,1.76e-09,1;UBERON:0010286,1.76e-09,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,1.00267582127178,0.724232594804119,0,0.486634870302636,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,1.14734648299525,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.427114777637135,0,0.600182192168805,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.463721619900307,0.352226082707465,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.495854746082934,0.192190067365106,0,0.30347334256665,0,0.31481234683064,0,0,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0.565621727814851,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0.392996164052485,0,0,0.633322905892992,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0.276283915531148,0.503865495708552,1.22722419002586,0.123084805461069,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0.291604613383254,0.347249989866585,0.885741385813839,0.241192877250816,0,0.221158519862449,0,0.219385397153973,0.10893846351899,0.139423744278603,0.307801034015188,0,0.23056390438806,0.718061155278177,0.217294743844016,0,0.0915975934018623,0.533034776018635,1.02193298195737,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0.104421949505455,0.943615861729479,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0.0882561266915003,1.12990370390266,0,0,0.253243183823515,0,0,0,0.19980960958213,0,0,0.514784993585894,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.273810757783986,0,0,0,0.837847203816763,0.229160424011684,0.717873024576814,0.599037001496973,0.858452096273142,2.00854311697685,1.47803639470798,0,0,0,0,0,0,0,0,0.272406812223151,0,0.275078873194468,0,0,0,0.242998226632099,0,0,0.367182116944987,0.105600336519406,0,0,0,1.98627591109629,0,0,0,0,1.19730191562487,0,0,0,0,0,0.258565912723101,0.66116300871345,0.171086837884329,0,0,0.157204305099666,0.414239055347196,0,0,0,0,3.80812462358632,1.2534494701135,2.75711019087115,0.983617892129413,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.248385611765534,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0.310525913752519,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0.256241518587947,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0.127894371303652,0,0,0.54604819096007,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,0.319267718114302,0.41023272848151,0.504143392443436,0.207471757392654,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,2.1058891937792,0,0,1.04762677792569,0.163771917510097,0,0,0,0.206686796501184,0.317079050969534,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0.171488009437418,0.203909198930495,0.328863867814245,0,0,0.235479278551542,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0,0.243835849964539,0,0.307988420568741,1.1598144313382,0,0,0,0,0.22589216407792,0,0,0,0,0.940634592723046,0.735444965261716,0.235676547101626,0.392616934229891,0.594092800654172,0,0.679708458751268,0.187967835959707,0.128915775947154,0,0,0,0,0,0,1.14671666521161,0.157771562193185,0.543931921527318,0,0,0,0.462175628631418,0,0.630832124175395,0,0.126698501011437,0.101988829741982,0,0.918948995348449,0,0.0757786982182394,0,0,1.24119595034274,0.426467963801962,1.1903221573187,0,0,0.112131862580613,0.0636471582781649,0.808468755832877,0.435433495793923,1.02669990325584,0.0673520530145875,0.143444410785353,0,0,0,0,0.0898252021065869,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p9@VLDLR | |||
}} |
Revision as of 00:36, 23 January 2014
Short description: | p9@VLDLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_VLDLR_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000382096_5end |
EntrezGene: | VLDLR |
HGNC: | 12698 |
UniProt: | Q5VVF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.94e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 5.79e-10 | 1 |
cardiac ventricle | 5.79e-10 | 1 |
future cardiac ventricle | 5.79e-10 | 1 |
cranial nerve II | 7.50e-10 | 1 |
cranial nerve | 7.50e-10 | 1 |
nerve trunk | 7.50e-10 | 1 |
nerve connecting eye with brain | 7.50e-10 | 1 |
nerve | 7.50e-10 | 1 |
retinal neural layer | 7.50e-10 | 1 |
presumptive neural retina | 7.50e-10 | 1 |
substantia nigra | 1.76e-09 | 1 |
midbrain nucleus | 1.76e-09 | 1 |
regional part of midbrain | 1.76e-09 | 1 |
midbrain | 1.76e-09 | 1 |
presumptive midbrain | 1.76e-09 | 1 |
midbrain neural tube | 1.76e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.08e-09 | 1 |
endocrine pancreas cancer | 2.08e-09 | 1 |
pancreatic endocrine carcinoma | 2.08e-09 | 1 |