FFCP PHASE1:Mm9::chr6:144152648..144152680,-: Difference between revisions
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{{FFCP|EntrezGene=20678|HGNC=|MCL_coexpression_id=76|UniProt=|association_with_transcript=-71bp_to_ENSMUST00000139478_5end|description=CAGE_peak_5_at_Sox5_5end|id=chr6:144152648..144152680,-|ontology_enrichment_celltype=CL:0000117!1.10e-09!23;CL:0000337!1.10e-09!23;CL:0002609!3.85e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,9.03e-11,6;CL:0000117,8.18e-07,23;CL:0000337,8.18e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!3.45e-21!34;UBERON:0001049!2.28e-20!52;UBERON:0005068!2.28e-20!52;UBERON:0006241!2.28e-20!52;UBERON:0007135!2.28e-20!52;UBERON:0002791!2.62e-20!29;UBERON:0003528!2.62e-20!29;UBERON:0001893!2.62e-20!29;UBERON:0000955!5.24e-19!50;UBERON:0006238!5.24e-19!50;UBERON:0003080!1.22e-18!40;UBERON:0002616!2.88e-18!49;UBERON:0002780!3.24e-18!39;UBERON:0001890!3.24e-18!39;UBERON:0006240!3.24e-18!39;UBERON:0000033!3.22e-17!63;UBERON:0003056!6.70e-17!49;UBERON:0001017!8.29e-16!73;UBERON:0005743!8.29e-16!73;UBERON:0000956!1.04e-15!21;UBERON:0001869!1.04e-15!21;UBERON:0000203!1.04e-15!21;UBERON:0000073!1.55e-15!75;UBERON:0001016!1.55e-15!75;UBERON:0002346!6.59e-14!71;UBERON:0003075!6.59e-14!71;UBERON:0007284!6.59e-14!71;UBERON:0002619!5.64e-12!17;UBERON:0004121!2.76e-11!102;UBERON:0000924!2.76e-11!102;UBERON:0006601!2.76e-11!102;UBERON:0000153!9.21e-11!94;UBERON:0002021!2.77e-10!10;UBERON:0000411!2.77e-10!10;UBERON:0001950!2.77e-10!10;UBERON:0007811!2.33e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.28e-29,29;UBERON:0002791,1.28e-29,29;UBERON:0001893,1.28e-29,29;UBERON:0002020,5.96e-28,34;UBERON:0000956,8.02e-26,21;UBERON:0001869,8.02e-26,21;UBERON:0000203,8.02e-26,21;UBERON:0002780,1.36e-21,39;UBERON:0001890,1.36e-21,39;UBERON:0006240,1.36e-21,39;UBERON:0003080,7.55e-21,40;UBERON:0002619,1.33e-19,17;UBERON:0000955,4.19e-18,47;UBERON:0006238,4.19e-18,47;UBERON:0001049,5.49e-18,52;UBERON:0005068,5.49e-18,52;UBERON:0006241,5.49e-18,52;UBERON:0007135,5.49e-18,52;UBERON:0002616,4.48e-17,46;UBERON:0003056,9.23e-17,49;UBERON:0002021,6.07e-16,10;UBERON:0000411,6.07e-16,10;UBERON:0001950,6.07e-16,10;UBERON:0000073,1.08e-15,54;UBERON:0002346,5.42e-14,64;UBERON:0003075,5.42e-14,64;UBERON:0007284,5.42e-14,64;UBERON:0001017,2.16e-11,73;UBERON:0010371,3.27e-11,73;UBERON:0001016,7.29e-11,75;UBERON:0000026,1.33e-08,12;UBERON:0004708,1.33e-08,12;UBERON:0002101,1.33e-08,12;UBERON:0004357,1.33e-08,12;UBERON:0004347,1.33e-08,12;UBERON:0005732,1.33e-08,12;UBERON:0005733,1.33e-08,12;UBERON:0010707,8.74e-08,13;UBERON:0004121,1.78e-07,95;UBERON:0000924,1.78e-07,95;UBERON:0006601,1.78e-07,95;UBERON:0002102,3.05e-07,7;UBERON:0004710,3.05e-07,7;UBERON:0005419,3.05e-07,7;UBERON:0005417,3.05e-07,7;UBERON:0005729,3.05e-07,7;UBERON:0010314,3.13e-07,92;UBERON:0000369,6.11e-07,5;UBERON:0002435,6.11e-07,5;UBERON:0000204,6.11e-07,5;UBERON:0010082,6.11e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,27.8925057109805,32.4014251996058,27.7628948983824,0.571301968807607,1.32521124570968,9.55428233876641,9.20116521775069,9.19218786610021,0,0.766124028511126,0.153606533256243,1.45074916503213,1.46380229763855,1.56274011167028,0.558365998002762,0.56276261003168,1.06958773443767,1.17851434189467,0.996601765593721,0,0,0.151143120213571,0,0,0,0.539703191637817,0,0.448026887097336,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0.884610551949874,3.558870698843,1.54589062922275,2.90925151881133,0,0.292780797011547,0.41889341362691,0,0,0,0,0.748953197024114,2.74500361691176,3.01570445070875,5.73620256634512,6.39288643325826,0.83115217823824,1.29793010454206,0,0.870848794270651,0,0,0,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0.187403449119458,1.03481348295606,0,1.70195472151037,3.51902248327898,2.6303487891309,2.50242524303038,2.43776516565517,2.67516777330327,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,1.89260953707715,2.77842453424068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0,0,0,0,2.57057053137446,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0,0.356737635204141,0,0,0,0,0,0,0.322928853391811,0.120625849856312,0.238744688006273,0,0,1.48340241608408,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,7.34177395402186,11.0478056761722,10.3121192419091,4.81188910562325,6.85082519770642,6.0431511791176,4.72515750162264,7.65546045481175,11.7817026335893,5.1776031175182,0,1.19707462020309,4.09760653809922,2.43106717068294,0.628839487883947,0.735374033800057,1.11123363900808,1.85431551515005,0.64183841918363,1.01078884705519,0.760437899670719,1.32038438970253,1.03005658216871,1.79270426733634,1.14870937911227,0.476293691283074,1.27472758539341,0.77163688185482,0.412085900803307,0.735994600671987,1.02860775715625,1.4198064492747,0,1.30811774969096,1.59985946706062,1.26921911837515,0.914639864363863,0.789209134313529,1.49384525230448,1.68342681497322,0.593175090620871,1.18205378850676,0.409231043169689,0.464810523557898,2.50778594275484,2.49810577937946,1.40358965067245,0.429742108096597,2.29545998482612,1.76473135295612,1.39120701372253|short_description=p5@Sox5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20678 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-71bp_to_ENSMUST00000139478_5end | |||
|cluster_id=chr6:144152648..144152680,- | |||
|description=CAGE_peak_5_at_Sox5_5end | |||
|id=chr6:144152648..144152680,- | |||
|ontology_enrichment_celltype=CL:0000117!1.10e-09!23;CL:0000337!1.10e-09!23;CL:0002609!3.85e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,9.03e-11,6;CL:0000117,8.18e-07,23;CL:0000337,8.18e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.45e-21!34;UBERON:0001049!2.28e-20!52;UBERON:0005068!2.28e-20!52;UBERON:0006241!2.28e-20!52;UBERON:0007135!2.28e-20!52;UBERON:0002791!2.62e-20!29;UBERON:0003528!2.62e-20!29;UBERON:0001893!2.62e-20!29;UBERON:0000955!5.24e-19!50;UBERON:0006238!5.24e-19!50;UBERON:0003080!1.22e-18!40;UBERON:0002616!2.88e-18!49;UBERON:0002780!3.24e-18!39;UBERON:0001890!3.24e-18!39;UBERON:0006240!3.24e-18!39;UBERON:0000033!3.22e-17!63;UBERON:0003056!6.70e-17!49;UBERON:0001017!8.29e-16!73;UBERON:0005743!8.29e-16!73;UBERON:0000956!1.04e-15!21;UBERON:0001869!1.04e-15!21;UBERON:0000203!1.04e-15!21;UBERON:0000073!1.55e-15!75;UBERON:0001016!1.55e-15!75;UBERON:0002346!6.59e-14!71;UBERON:0003075!6.59e-14!71;UBERON:0007284!6.59e-14!71;UBERON:0002619!5.64e-12!17;UBERON:0004121!2.76e-11!102;UBERON:0000924!2.76e-11!102;UBERON:0006601!2.76e-11!102;UBERON:0000153!9.21e-11!94;UBERON:0002021!2.77e-10!10;UBERON:0000411!2.77e-10!10;UBERON:0001950!2.77e-10!10;UBERON:0007811!2.33e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.28e-29,29;UBERON:0002791,1.28e-29,29;UBERON:0001893,1.28e-29,29;UBERON:0002020,5.96e-28,34;UBERON:0000956,8.02e-26,21;UBERON:0001869,8.02e-26,21;UBERON:0000203,8.02e-26,21;UBERON:0002780,1.36e-21,39;UBERON:0001890,1.36e-21,39;UBERON:0006240,1.36e-21,39;UBERON:0003080,7.55e-21,40;UBERON:0002619,1.33e-19,17;UBERON:0000955,4.19e-18,47;UBERON:0006238,4.19e-18,47;UBERON:0001049,5.49e-18,52;UBERON:0005068,5.49e-18,52;UBERON:0006241,5.49e-18,52;UBERON:0007135,5.49e-18,52;UBERON:0002616,4.48e-17,46;UBERON:0003056,9.23e-17,49;UBERON:0002021,6.07e-16,10;UBERON:0000411,6.07e-16,10;UBERON:0001950,6.07e-16,10;UBERON:0000073,1.08e-15,54;UBERON:0002346,5.42e-14,64;UBERON:0003075,5.42e-14,64;UBERON:0007284,5.42e-14,64;UBERON:0001017,2.16e-11,73;UBERON:0010371,3.27e-11,73;UBERON:0001016,7.29e-11,75;UBERON:0000026,1.33e-08,12;UBERON:0004708,1.33e-08,12;UBERON:0002101,1.33e-08,12;UBERON:0004357,1.33e-08,12;UBERON:0004347,1.33e-08,12;UBERON:0005732,1.33e-08,12;UBERON:0005733,1.33e-08,12;UBERON:0010707,8.74e-08,13;UBERON:0004121,1.78e-07,95;UBERON:0000924,1.78e-07,95;UBERON:0006601,1.78e-07,95;UBERON:0002102,3.05e-07,7;UBERON:0004710,3.05e-07,7;UBERON:0005419,3.05e-07,7;UBERON:0005417,3.05e-07,7;UBERON:0005729,3.05e-07,7;UBERON:0010314,3.13e-07,92;UBERON:0000369,6.11e-07,5;UBERON:0002435,6.11e-07,5;UBERON:0000204,6.11e-07,5;UBERON:0010082,6.11e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,27.8925057109805,32.4014251996058,27.7628948983824,0.571301968807607,1.32521124570968,9.55428233876641,9.20116521775069,9.19218786610021,0,0.766124028511126,0.153606533256243,1.45074916503213,1.46380229763855,1.56274011167028,0.558365998002762,0.56276261003168,1.06958773443767,1.17851434189467,0.996601765593721,0,0,0.151143120213571,0,0,0,0.539703191637817,0,0.448026887097336,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0.884610551949874,3.558870698843,1.54589062922275,2.90925151881133,0,0.292780797011547,0.41889341362691,0,0,0,0,0.748953197024114,2.74500361691176,3.01570445070875,5.73620256634512,6.39288643325826,0.83115217823824,1.29793010454206,0,0.870848794270651,0,0,0,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0.187403449119458,1.03481348295606,0,1.70195472151037,3.51902248327898,2.6303487891309,2.50242524303038,2.43776516565517,2.67516777330327,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,1.89260953707715,2.77842453424068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0,0,0,0,2.57057053137446,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0,0.356737635204141,0,0,0,0,0,0,0.322928853391811,0.120625849856312,0.238744688006273,0,0,1.48340241608408,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,7.34177395402186,11.0478056761722,10.3121192419091,4.81188910562325,6.85082519770642,6.0431511791176,4.72515750162264,7.65546045481175,11.7817026335893,5.1776031175182,0,1.19707462020309,4.09760653809922,2.43106717068294,0.628839487883947,0.735374033800057,1.11123363900808,1.85431551515005,0.64183841918363,1.01078884705519,0.760437899670719,1.32038438970253,1.03005658216871,1.79270426733634,1.14870937911227,0.476293691283074,1.27472758539341,0.77163688185482,0.412085900803307,0.735994600671987,1.02860775715625,1.4198064492747,0,1.30811774969096,1.59985946706062,1.26921911837515,0.914639864363863,0.789209134313529,1.49384525230448,1.68342681497322,0.593175090620871,1.18205378850676,0.409231043169689,0.464810523557898,2.50778594275484,2.49810577937946,1.40358965067245,0.429742108096597,2.29545998482612,1.76473135295612,1.39120701372253 | |||
|short_description=p5@Sox5 | |||
}} |
Revision as of 09:34, 5 August 2015
Short description: | p5@Sox5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Sox5_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | -71bp_to_ENSMUST00000139478_5end |
EntrezGene: | 20678 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 9.03e-11 | 6 |
CNS neuron (sensu Vertebrata) | 8.18e-07 | 23 |
neuroblast (sensu Vertebrata) | 8.18e-07 | 23 |