FFCP PHASE1:Mm9::chr6:5675877..5675888,+: Difference between revisions
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{{FFCP|EntrezGene=13426|HGNC=|MCL_coexpression_id=1|UniProt=D3Z258|association_with_transcript=59bp_to_ENSMUST00000153942_5end|description=CAGE_peak_3_at_Dync1i1_5end|id=chr6:5675877..5675888,+|ontology_enrichment_celltype=CL:0000117!3.19e-09!23;CL:0000337!3.19e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.76e-09,23;CL:0000337,4.76e-09,23;CL:0002610,2.58e-08,3;CL:0002614,4.92e-08,3;CL:0002612,6.95e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.61e-21!52;UBERON:0005068!1.61e-21!52;UBERON:0006241!1.61e-21!52;UBERON:0007135!1.61e-21!52;UBERON:0002020!2.66e-20!34;UBERON:0000955!3.88e-20!50;UBERON:0006238!3.88e-20!50;UBERON:0002616!3.77e-19!49;UBERON:0000033!2.13e-17!63;UBERON:0002346!1.41e-16!71;UBERON:0003075!1.41e-16!71;UBERON:0007284!1.41e-16!71;UBERON:0001017!2.39e-16!73;UBERON:0005743!2.39e-16!73;UBERON:0002791!3.13e-16!29;UBERON:0003528!3.13e-16!29;UBERON:0001893!3.13e-16!29;UBERON:0000073!1.74e-15!75;UBERON:0001016!1.74e-15!75;UBERON:0003080!1.82e-14!40;UBERON:0002780!1.43e-13!39;UBERON:0001890!1.43e-13!39;UBERON:0006240!1.43e-13!39;UBERON:0003056!3.55e-13!49;UBERON:0000153!1.02e-11!94;UBERON:0000956!2.85e-11!21;UBERON:0001869!2.85e-11!21;UBERON:0000203!2.85e-11!21;UBERON:0007811!3.22e-11!86;UBERON:0002021!8.03e-11!10;UBERON:0000411!8.03e-11!10;UBERON:0001950!8.03e-11!10;UBERON:0004121!1.06e-10!102;UBERON:0000924!1.06e-10!102;UBERON:0006601!1.06e-10!102;UBERON:0002619!9.29e-09!17;UBERON:0003076!5.68e-08!12;UBERON:0003057!5.68e-08!12;UBERON:0002298!4.81e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.50e-39,54;UBERON:0001049,1.74e-35,52;UBERON:0005068,1.74e-35,52;UBERON:0006241,1.74e-35,52;UBERON:0007135,1.74e-35,52;UBERON:0001017,2.34e-32,73;UBERON:0001016,2.48e-31,75;UBERON:0002346,6.69e-30,64;UBERON:0003075,6.69e-30,64;UBERON:0007284,6.69e-30,64;UBERON:0000955,5.45e-29,47;UBERON:0006238,5.45e-29,47;UBERON:0002616,7.56e-27,46;UBERON:0010371,1.74e-25,73;UBERON:0004121,3.82e-25,95;UBERON:0000924,3.82e-25,95;UBERON:0006601,3.82e-25,95;UBERON:0002020,2.88e-24,34;UBERON:0002021,1.71e-21,10;UBERON:0000411,1.71e-21,10;UBERON:0001950,1.71e-21,10;UBERON:0003080,1.65e-20,40;UBERON:0010314,5.40e-19,92;UBERON:0002780,1.30e-18,39;UBERON:0001890,1.30e-18,39;UBERON:0006240,1.30e-18,39;UBERON:0003528,4.85e-18,29;UBERON:0002791,4.85e-18,29;UBERON:0001893,4.85e-18,29;UBERON:0003056,9.34e-18,49;UBERON:0003076,1.42e-16,12;UBERON:0003057,1.42e-16,12;UBERON:0002619,8.55e-15,17;UBERON:0000956,3.26e-14,21;UBERON:0001869,3.26e-14,21;UBERON:0000203,3.26e-14,21;UBERON:0000025,5.32e-13,114;UBERON:0004111,9.28e-12,122;UBERON:0002950,9.79e-11,4;UBERON:0001891,9.79e-11,4;UBERON:0009616,9.79e-11,4;UBERON:0010286,9.79e-11,4;UBERON:0002240,2.28e-10,6;UBERON:0005174,2.28e-10,6;UBERON:0001137,2.28e-10,6;UBERON:0004684,2.58e-08,3;UBERON:0002275,2.58e-08,3;UBERON:0011216,3.06e-08,194;UBERON:0002038,4.92e-08,3;UBERON:0009663,4.92e-08,3;UBERON:0009661,4.92e-08,3;UBERON:0000125,4.92e-08,3;UBERON:0002308,4.92e-08,3;UBERON:0001948,5.55e-08,5;UBERON:0002315,5.55e-08,5;UBERON:0002257,6.95e-08,3;UBERON:0004733,8.02e-08,6;UBERON:0004732,8.02e-08,6;UBERON:0002028,8.02e-08,6;UBERON:0007277,8.02e-08,6;UBERON:0000483,3.48e-07,174;UBERON:0000119,4.93e-07,176;UBERON:0001896,6.72e-07,2;UBERON:0002298,6.72e-07,2;UBERON:0005290,6.72e-07,2;UBERON:0010096,6.72e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.630974884054146,1.14260393761521,0.662605622854841,0,0.383381884072945,0,1.10115880999389,2.68143409978894,2.4577045320999,0.131886287730194,0.0914876436024097,0.52091337055676,1.67509799400829,1.12552522006336,1.37518422999129,1.17851434189467,1.42371680799103,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,1.46390398505774,3.77004072264219,0,0,0,0,3.89455662452539,1.37250180845588,0.376963056338593,3.65031072403781,2.55715457330331,2.90903262383384,1.94689515681309,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,1.03481348295606,0.431135985865684,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,2.73376933133365,0.617427674275707,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,3.8679856575427,0,0,0,0,0,0,0,0,0,0,0,6.10510501201433,0.567760340833074,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0.13020438484395,0.629156066554265,0,0,0,0,0.102710957164827,0,0,0,0,0,0.201932899896295,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,4.51801474093653,2.76195141904306,3.43737308063638,1.54667864109319,2.74033007908257,2.2661816921691,0.675022500231806,2.70192721934532,4.98456649882625,2.5888015587591,0,0,0.341467211508268,0,0.209613162627982,0,0.666740183404846,0.824140228955577,0,0,0.50695859978048,0.377252682772152,0.280924522409647,0.384150914429216,0.0574354689556133,0,0,0.192909220463705,0,0.588795680537589,0,0.354951612318675,0.476872379894642,0.290692833264657,0.658765662907314,0.338458431566706,0,0.526139422875686,0.407412341537585,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p3@Dync1i1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13426 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z258 | |||
|association_with_transcript=59bp_to_ENSMUST00000153942_5end | |||
|cluster_id=chr6:5675877..5675888,+ | |||
|description=CAGE_peak_3_at_Dync1i1_5end | |||
|id=chr6:5675877..5675888,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.19e-09!23;CL:0000337!3.19e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.76e-09,23;CL:0000337,4.76e-09,23;CL:0002610,2.58e-08,3;CL:0002614,4.92e-08,3;CL:0002612,6.95e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.61e-21!52;UBERON:0005068!1.61e-21!52;UBERON:0006241!1.61e-21!52;UBERON:0007135!1.61e-21!52;UBERON:0002020!2.66e-20!34;UBERON:0000955!3.88e-20!50;UBERON:0006238!3.88e-20!50;UBERON:0002616!3.77e-19!49;UBERON:0000033!2.13e-17!63;UBERON:0002346!1.41e-16!71;UBERON:0003075!1.41e-16!71;UBERON:0007284!1.41e-16!71;UBERON:0001017!2.39e-16!73;UBERON:0005743!2.39e-16!73;UBERON:0002791!3.13e-16!29;UBERON:0003528!3.13e-16!29;UBERON:0001893!3.13e-16!29;UBERON:0000073!1.74e-15!75;UBERON:0001016!1.74e-15!75;UBERON:0003080!1.82e-14!40;UBERON:0002780!1.43e-13!39;UBERON:0001890!1.43e-13!39;UBERON:0006240!1.43e-13!39;UBERON:0003056!3.55e-13!49;UBERON:0000153!1.02e-11!94;UBERON:0000956!2.85e-11!21;UBERON:0001869!2.85e-11!21;UBERON:0000203!2.85e-11!21;UBERON:0007811!3.22e-11!86;UBERON:0002021!8.03e-11!10;UBERON:0000411!8.03e-11!10;UBERON:0001950!8.03e-11!10;UBERON:0004121!1.06e-10!102;UBERON:0000924!1.06e-10!102;UBERON:0006601!1.06e-10!102;UBERON:0002619!9.29e-09!17;UBERON:0003076!5.68e-08!12;UBERON:0003057!5.68e-08!12;UBERON:0002298!4.81e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.50e-39,54;UBERON:0001049,1.74e-35,52;UBERON:0005068,1.74e-35,52;UBERON:0006241,1.74e-35,52;UBERON:0007135,1.74e-35,52;UBERON:0001017,2.34e-32,73;UBERON:0001016,2.48e-31,75;UBERON:0002346,6.69e-30,64;UBERON:0003075,6.69e-30,64;UBERON:0007284,6.69e-30,64;UBERON:0000955,5.45e-29,47;UBERON:0006238,5.45e-29,47;UBERON:0002616,7.56e-27,46;UBERON:0010371,1.74e-25,73;UBERON:0004121,3.82e-25,95;UBERON:0000924,3.82e-25,95;UBERON:0006601,3.82e-25,95;UBERON:0002020,2.88e-24,34;UBERON:0002021,1.71e-21,10;UBERON:0000411,1.71e-21,10;UBERON:0001950,1.71e-21,10;UBERON:0003080,1.65e-20,40;UBERON:0010314,5.40e-19,92;UBERON:0002780,1.30e-18,39;UBERON:0001890,1.30e-18,39;UBERON:0006240,1.30e-18,39;UBERON:0003528,4.85e-18,29;UBERON:0002791,4.85e-18,29;UBERON:0001893,4.85e-18,29;UBERON:0003056,9.34e-18,49;UBERON:0003076,1.42e-16,12;UBERON:0003057,1.42e-16,12;UBERON:0002619,8.55e-15,17;UBERON:0000956,3.26e-14,21;UBERON:0001869,3.26e-14,21;UBERON:0000203,3.26e-14,21;UBERON:0000025,5.32e-13,114;UBERON:0004111,9.28e-12,122;UBERON:0002950,9.79e-11,4;UBERON:0001891,9.79e-11,4;UBERON:0009616,9.79e-11,4;UBERON:0010286,9.79e-11,4;UBERON:0002240,2.28e-10,6;UBERON:0005174,2.28e-10,6;UBERON:0001137,2.28e-10,6;UBERON:0004684,2.58e-08,3;UBERON:0002275,2.58e-08,3;UBERON:0011216,3.06e-08,194;UBERON:0002038,4.92e-08,3;UBERON:0009663,4.92e-08,3;UBERON:0009661,4.92e-08,3;UBERON:0000125,4.92e-08,3;UBERON:0002308,4.92e-08,3;UBERON:0001948,5.55e-08,5;UBERON:0002315,5.55e-08,5;UBERON:0002257,6.95e-08,3;UBERON:0004733,8.02e-08,6;UBERON:0004732,8.02e-08,6;UBERON:0002028,8.02e-08,6;UBERON:0007277,8.02e-08,6;UBERON:0000483,3.48e-07,174;UBERON:0000119,4.93e-07,176;UBERON:0001896,6.72e-07,2;UBERON:0002298,6.72e-07,2;UBERON:0005290,6.72e-07,2;UBERON:0010096,6.72e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.630974884054146,1.14260393761521,0.662605622854841,0,0.383381884072945,0,1.10115880999389,2.68143409978894,2.4577045320999,0.131886287730194,0.0914876436024097,0.52091337055676,1.67509799400829,1.12552522006336,1.37518422999129,1.17851434189467,1.42371680799103,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,1.46390398505774,3.77004072264219,0,0,0,0,3.89455662452539,1.37250180845588,0.376963056338593,3.65031072403781,2.55715457330331,2.90903262383384,1.94689515681309,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,1.03481348295606,0.431135985865684,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,2.73376933133365,0.617427674275707,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,3.8679856575427,0,0,0,0,0,0,0,0,0,0,0,6.10510501201433,0.567760340833074,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0.13020438484395,0.629156066554265,0,0,0,0,0.102710957164827,0,0,0,0,0,0.201932899896295,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,4.51801474093653,2.76195141904306,3.43737308063638,1.54667864109319,2.74033007908257,2.2661816921691,0.675022500231806,2.70192721934532,4.98456649882625,2.5888015587591,0,0,0.341467211508268,0,0.209613162627982,0,0.666740183404846,0.824140228955577,0,0,0.50695859978048,0.377252682772152,0.280924522409647,0.384150914429216,0.0574354689556133,0,0,0.192909220463705,0,0.588795680537589,0,0.354951612318675,0.476872379894642,0.290692833264657,0.658765662907314,0.338458431566706,0,0.526139422875686,0.407412341537585,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p3@Dync1i1 | |||
}} |
Revision as of 23:56, 5 August 2015
Short description: | p3@Dync1i1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dync1i1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 59bp_to_ENSMUST00000153942_5end |
EntrezGene: | 13426 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.76e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.76e-09 | 23 |
raphe nuclei neuron | 2.58e-08 | 3 |
neuron of the substantia nigra | 4.92e-08 | 3 |
neuron of the ventral spinal cord | 6.95e-08 | 3 |