FFCP PHASE1:Mm9::chr8:113605798..113605816,-: Difference between revisions
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{{FFCP|EntrezGene=353287|HGNC=|MCL_coexpression_id=173|UniProt=Q7TSQ1|association_with_transcript=-190bp_to_NM_181549,uc012gkt.1_5end|description=CAGE_peak_2_at_Clec18a_5end|id=chr8:113605798..113605816,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,5.55e-13,2;CL:0002604,5.55e-13,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000020!2.14e-14!12;UBERON:0001032!2.14e-14!12;UBERON:0004456!2.14e-14!12;UBERON:0000970!9.48e-14!9;UBERON:0000019!9.48e-14!9;UBERON:0000047!9.48e-14!9;UBERON:0004088!9.48e-14!9;UBERON:0002104!9.48e-14!9;UBERON:0001456!9.48e-14!9;UBERON:0003072!9.48e-14!9;UBERON:0003071!9.48e-14!9;UBERON:0004128!9.48e-14!9;UBERON:0005085!4.70e-13!13;UBERON:0002113!3.85e-12!14;UBERON:0003918!3.85e-12!14;UBERON:0005095!3.85e-12!14;UBERON:0007687!3.85e-12!14;UBERON:0001444!7.94e-11!11;UBERON:0006554!3.01e-10!16;UBERON:0001008!1.80e-09!17;UBERON:0000489!3.98e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002113,8.06e-27,14;UBERON:0003918,8.06e-27,14;UBERON:0011143,8.06e-27,14;UBERON:0005095,8.06e-27,14;UBERON:0007687,8.06e-27,14;UBERON:0006554,1.06e-20,18;UBERON:0001008,1.42e-19,19;UBERON:0000489,1.23e-17,21;UBERON:0000970,2.45e-10,9;UBERON:0000019,2.45e-10,9;UBERON:0000047,2.45e-10,9;UBERON:0010312,2.45e-10,9;UBERON:0004088,2.45e-10,9;UBERON:0002104,2.45e-10,9;UBERON:0001456,2.45e-10,9;UBERON:0003072,2.45e-10,9;UBERON:0004128,2.45e-10,9;UBERON:0003071,2.45e-10,9;UBERON:0001444,1.69e-08,11;UBERON:0003103,3.46e-08,43;UBERON:0000020,8.29e-08,12;UBERON:0001032,8.29e-08,12;UBERON:0004456,8.29e-08,12;UBERON:0000033,3.20e-07,13;UBERON:0005085,3.20e-07,13;UBERON:0005172,4.48e-07,49;UBERON:0005173,4.48e-07,49;UBERON:0002417,4.48e-07,49;UBERON:0000916,4.48e-07,49|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17403747195497,9.3326351555656,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0.922461989024234,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.124406970610093,1.26361379216837,0.841767423545896,3.6433724029557,1.60931473103431,1.44049703844279,1.05493372485001,0.816437989815934,0.896796041993948,0.937017245597288,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87970492954553,7.31190480702264,10.1436962105772,12.4227309985642,12.0250542043928,7.22398944870281,5.94423448968019,0.590440591918409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34079422240703,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.192075457214608,0.0574354689556133,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0,0.263069711437843,0.407412341537585,0,0,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0,0.467863216890817,0.429742108096597,0,0,0|short_description=p2@Clec18a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:353287 | |||
|HGNC= | |||
|MCL_coexpression_id=173 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TSQ1 | |||
|association_with_transcript=-190bp_to_NM_181549,uc012gkt.1_5end | |||
|cluster_id=chr8:113605798..113605816,- | |||
|description=CAGE_peak_2_at_Clec18a_5end | |||
|id=chr8:113605798..113605816,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,5.55e-13,2;CL:0002604,5.55e-13,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000020!2.14e-14!12;UBERON:0001032!2.14e-14!12;UBERON:0004456!2.14e-14!12;UBERON:0000970!9.48e-14!9;UBERON:0000019!9.48e-14!9;UBERON:0000047!9.48e-14!9;UBERON:0004088!9.48e-14!9;UBERON:0002104!9.48e-14!9;UBERON:0001456!9.48e-14!9;UBERON:0003072!9.48e-14!9;UBERON:0003071!9.48e-14!9;UBERON:0004128!9.48e-14!9;UBERON:0005085!4.70e-13!13;UBERON:0002113!3.85e-12!14;UBERON:0003918!3.85e-12!14;UBERON:0005095!3.85e-12!14;UBERON:0007687!3.85e-12!14;UBERON:0001444!7.94e-11!11;UBERON:0006554!3.01e-10!16;UBERON:0001008!1.80e-09!17;UBERON:0000489!3.98e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,8.06e-27,14;UBERON:0003918,8.06e-27,14;UBERON:0011143,8.06e-27,14;UBERON:0005095,8.06e-27,14;UBERON:0007687,8.06e-27,14;UBERON:0006554,1.06e-20,18;UBERON:0001008,1.42e-19,19;UBERON:0000489,1.23e-17,21;UBERON:0000970,2.45e-10,9;UBERON:0000019,2.45e-10,9;UBERON:0000047,2.45e-10,9;UBERON:0010312,2.45e-10,9;UBERON:0004088,2.45e-10,9;UBERON:0002104,2.45e-10,9;UBERON:0001456,2.45e-10,9;UBERON:0003072,2.45e-10,9;UBERON:0004128,2.45e-10,9;UBERON:0003071,2.45e-10,9;UBERON:0001444,1.69e-08,11;UBERON:0003103,3.46e-08,43;UBERON:0000020,8.29e-08,12;UBERON:0001032,8.29e-08,12;UBERON:0004456,8.29e-08,12;UBERON:0000033,3.20e-07,13;UBERON:0005085,3.20e-07,13;UBERON:0005172,4.48e-07,49;UBERON:0005173,4.48e-07,49;UBERON:0002417,4.48e-07,49;UBERON:0000916,4.48e-07,49 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17403747195497,9.3326351555656,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0.922461989024234,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.124406970610093,1.26361379216837,0.841767423545896,3.6433724029557,1.60931473103431,1.44049703844279,1.05493372485001,0.816437989815934,0.896796041993948,0.937017245597288,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87970492954553,7.31190480702264,10.1436962105772,12.4227309985642,12.0250542043928,7.22398944870281,5.94423448968019,0.590440591918409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34079422240703,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.192075457214608,0.0574354689556133,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0,0.263069711437843,0.407412341537585,0,0,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0,0.467863216890817,0.429742108096597,0,0,0 | |||
|short_description=p2@Clec18a | |||
}} |
Revision as of 22:26, 5 August 2015
Short description: | p2@Clec18a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Clec18a_5end |
Coexpression cluster: | MCL_coexpression_mm9:173 |
Association with transcript: | -190bp_to_NM_181549, uc012gkt.1_5end |
EntrezGene: | 353287 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 5.55e-13 | 2 |
astrocyte of the hippocampus | 5.55e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
kidney | 8.06e-27 | 14 |
kidney mesenchyme | 8.06e-27 | 14 |
upper urinary tract | 8.06e-27 | 14 |
kidney rudiment | 8.06e-27 | 14 |
kidney field | 8.06e-27 | 14 |
urinary system structure | 1.06e-20 | 18 |
renal system | 1.42e-19 | 19 |
cavitated compound organ | 1.23e-17 | 21 |
eye | 2.45e-10 | 9 |
camera-type eye | 2.45e-10 | 9 |
simple eye | 2.45e-10 | 9 |
immature eye | 2.45e-10 | 9 |
ocular region | 2.45e-10 | 9 |
visual system | 2.45e-10 | 9 |
face | 2.45e-10 | 9 |
optic cup | 2.45e-10 | 9 |
optic vesicle | 2.45e-10 | 9 |
eye primordium | 2.45e-10 | 9 |
subdivision of head | 1.69e-08 | 11 |
compound organ | 3.46e-08 | 43 |
sense organ | 8.29e-08 | 12 |
sensory system | 8.29e-08 | 12 |
entire sense organ system | 8.29e-08 | 12 |
head | 3.20e-07 | 13 |
ectodermal placode | 3.20e-07 | 13 |
abdomen element | 4.48e-07 | 49 |
abdominal segment element | 4.48e-07 | 49 |
abdominal segment of trunk | 4.48e-07 | 49 |
abdomen | 4.48e-07 | 49 |