FFCP PHASE1:Mm9::chr8:125944765..125944779,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=392|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:125944765..125944779,+|id=chr8:125944765..125944779,+|ontology_enrichment_celltype=CL:0000117!1.14e-24!23;CL:0000337!1.14e-24!23;CL:0000540!1.21e-24!33;CL:0000047!1.21e-24!33;CL:0000031!1.21e-24!33;CL:0000404!1.21e-24!33;CL:0000393!1.62e-22!39;CL:0000211!1.62e-22!39;CL:0002319!9.11e-18!43;CL:0000221!3.91e-17!44;CL:0000133!3.91e-17!44;CL:0000055!2.54e-16!50;CL:0002321!7.78e-09!70;CL:0000220!7.78e-09!70;CL:0002609!2.11e-08!6|ontology_enrichment_celltype_v019_2=CL:0000117,7.03e-44,23;CL:0000337,7.03e-44,23;CL:0000540,8.90e-30,33;CL:0000047,8.90e-30,33;CL:0000031,8.90e-30,33;CL:0000404,8.90e-30,33;CL:0000393,8.87e-25,39;CL:0000211,8.87e-25,39;CL:0002319,3.22e-22,43;CL:0000221,1.19e-21,44;CL:0000133,1.19e-21,44;CL:0002609,3.16e-17,6;CL:0002613,1.81e-13,3;CL:0002612,3.52e-13,3;CL:0000120,3.87e-13,3;CL:0002321,1.44e-12,70;CL:0000723,5.26e-09,91;CL:0000048,5.26e-09,91;CL:0000034,2.86e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.78e-30!75;UBERON:0001016!3.78e-30!75;UBERON:0001017!3.86e-30!73;UBERON:0005743!3.86e-30!73;UBERON:0002346!1.59e-26!71;UBERON:0003075!1.59e-26!71;UBERON:0007284!1.59e-26!71;UBERON:0004121!3.34e-26!102;UBERON:0000924!3.34e-26!102;UBERON:0006601!3.34e-26!102;UBERON:0001049!4.60e-25!52;UBERON:0005068!4.60e-25!52;UBERON:0006241!4.60e-25!52;UBERON:0007135!4.60e-25!52;UBERON:0002020!1.58e-24!34;UBERON:0000955!6.95e-21!50;UBERON:0006238!6.95e-21!50;UBERON:0002616!5.46e-20!49;UBERON:0000033!1.19e-19!63;UBERON:0002780!1.47e-19!39;UBERON:0001890!1.47e-19!39;UBERON:0006240!1.47e-19!39;UBERON:0003056!1.48e-19!49;UBERON:0002791!6.81e-19!29;UBERON:0003528!6.81e-19!29;UBERON:0001893!6.81e-19!29;UBERON:0003080!8.05e-19!40;UBERON:0000956!9.85e-13!21;UBERON:0001869!9.85e-13!21;UBERON:0000203!9.85e-13!21;UBERON:0007811!4.46e-11!86;UBERON:0002619!2.36e-10!17;UBERON:0002021!3.38e-09!10;UBERON:0000411!3.38e-09!10;UBERON:0001950!3.38e-09!10;UBERON:0000153!3.75e-09!94;UBERON:0002240!7.13e-08!6;UBERON:0005174!7.13e-08!6;UBERON:0001137!7.13e-08!6;UBERON:0002420!1.88e-07!8;UBERON:0007245!1.88e-07!8;UBERON:0010009!1.88e-07!8;UBERON:0010011!1.88e-07!8;UBERON:0000454!1.88e-07!8;UBERON:0001948!3.97e-07!5;UBERON:0002315!3.97e-07!5;UBERON:0003076!8.20e-07!12;UBERON:0003057!8.20e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.37e-32,34;UBERON:0003528,9.96e-22,29;UBERON:0002791,9.96e-22,29;UBERON:0001893,9.96e-22,29;UBERON:0001049,5.37e-20,52;UBERON:0005068,5.37e-20,52;UBERON:0006241,5.37e-20,52;UBERON:0007135,5.37e-20,52;UBERON:0001017,1.76e-19,73;UBERON:0000073,3.78e-19,54;UBERON:0001016,7.09e-19,75;UBERON:0002346,9.52e-18,64;UBERON:0003075,9.52e-18,64;UBERON:0007284,9.52e-18,64;UBERON:0004121,6.87e-16,95;UBERON:0000924,6.87e-16,95;UBERON:0006601,6.87e-16,95;UBERON:0002780,1.39e-15,39;UBERON:0001890,1.39e-15,39;UBERON:0006240,1.39e-15,39;UBERON:0010371,3.48e-15,73;UBERON:0003080,3.88e-15,40;UBERON:0000956,3.33e-14,21;UBERON:0001869,3.33e-14,21;UBERON:0000203,3.33e-14,21;UBERON:0003056,6.35e-14,49;UBERON:0001948,2.16e-13,5;UBERON:0002315,2.16e-13,5;UBERON:0002257,3.52e-13,3;UBERON:0002616,7.22e-13,46;UBERON:0000955,1.52e-12,47;UBERON:0006238,1.52e-12,47;UBERON:0010314,2.07e-11,92;UBERON:0002240,3.47e-11,6;UBERON:0005174,3.47e-11,6;UBERON:0001137,3.47e-11,6;UBERON:0002420,7.79e-09,8;UBERON:0007245,7.79e-09,8;UBERON:0010009,7.79e-09,8;UBERON:0010011,7.79e-09,8;UBERON:0000454,7.79e-09,8;UBERON:0000369,2.90e-08,5;UBERON:0002435,2.90e-08,5;UBERON:0000204,2.90e-08,5;UBERON:0010082,2.90e-08,5;UBERON:0002619,7.01e-08,17;UBERON:0000025,1.68e-07,114;UBERON:0004111,8.28e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,1.82084814773638,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0,1.8664130215526,6.21027316325777,2.10324961351382,1.71390590642282,0.883474163806454,1.10241719293459,0.958454710182364,8.27296907949019,0,0.766124028511126,0.307213066512487,2.50583946687368,3.01909223887952,2.6045668527838,4.18774498502071,0.56276261003168,0.61119299110724,2.06240009831567,2.42031857358475,2.98239113320481,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0.251308704225729,0,0.255715457330331,0.20778804455956,0,0,0,0,0,0.130120442962704,1.14951052216736,0.540186389416048,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92614151141356,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0.809621403349789,0.292255857911312,0,0.642642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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=392 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:125944765..125944779,+ | |||
|description=CAGE_peak_at_chr8:125944765..125944779,+ | |||
|id=chr8:125944765..125944779,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.14e-24!23;CL:0000337!1.14e-24!23;CL:0000540!1.21e-24!33;CL:0000047!1.21e-24!33;CL:0000031!1.21e-24!33;CL:0000404!1.21e-24!33;CL:0000393!1.62e-22!39;CL:0000211!1.62e-22!39;CL:0002319!9.11e-18!43;CL:0000221!3.91e-17!44;CL:0000133!3.91e-17!44;CL:0000055!2.54e-16!50;CL:0002321!7.78e-09!70;CL:0000220!7.78e-09!70;CL:0002609!2.11e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.03e-44,23;CL:0000337,7.03e-44,23;CL:0000540,8.90e-30,33;CL:0000047,8.90e-30,33;CL:0000031,8.90e-30,33;CL:0000404,8.90e-30,33;CL:0000393,8.87e-25,39;CL:0000211,8.87e-25,39;CL:0002319,3.22e-22,43;CL:0000221,1.19e-21,44;CL:0000133,1.19e-21,44;CL:0002609,3.16e-17,6;CL:0002613,1.81e-13,3;CL:0002612,3.52e-13,3;CL:0000120,3.87e-13,3;CL:0002321,1.44e-12,70;CL:0000723,5.26e-09,91;CL:0000048,5.26e-09,91;CL:0000034,2.86e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.78e-30!75;UBERON:0001016!3.78e-30!75;UBERON:0001017!3.86e-30!73;UBERON:0005743!3.86e-30!73;UBERON:0002346!1.59e-26!71;UBERON:0003075!1.59e-26!71;UBERON:0007284!1.59e-26!71;UBERON:0004121!3.34e-26!102;UBERON:0000924!3.34e-26!102;UBERON:0006601!3.34e-26!102;UBERON:0001049!4.60e-25!52;UBERON:0005068!4.60e-25!52;UBERON:0006241!4.60e-25!52;UBERON:0007135!4.60e-25!52;UBERON:0002020!1.58e-24!34;UBERON:0000955!6.95e-21!50;UBERON:0006238!6.95e-21!50;UBERON:0002616!5.46e-20!49;UBERON:0000033!1.19e-19!63;UBERON:0002780!1.47e-19!39;UBERON:0001890!1.47e-19!39;UBERON:0006240!1.47e-19!39;UBERON:0003056!1.48e-19!49;UBERON:0002791!6.81e-19!29;UBERON:0003528!6.81e-19!29;UBERON:0001893!6.81e-19!29;UBERON:0003080!8.05e-19!40;UBERON:0000956!9.85e-13!21;UBERON:0001869!9.85e-13!21;UBERON:0000203!9.85e-13!21;UBERON:0007811!4.46e-11!86;UBERON:0002619!2.36e-10!17;UBERON:0002021!3.38e-09!10;UBERON:0000411!3.38e-09!10;UBERON:0001950!3.38e-09!10;UBERON:0000153!3.75e-09!94;UBERON:0002240!7.13e-08!6;UBERON:0005174!7.13e-08!6;UBERON:0001137!7.13e-08!6;UBERON:0002420!1.88e-07!8;UBERON:0007245!1.88e-07!8;UBERON:0010009!1.88e-07!8;UBERON:0010011!1.88e-07!8;UBERON:0000454!1.88e-07!8;UBERON:0001948!3.97e-07!5;UBERON:0002315!3.97e-07!5;UBERON:0003076!8.20e-07!12;UBERON:0003057!8.20e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.37e-32,34;UBERON:0003528,9.96e-22,29;UBERON:0002791,9.96e-22,29;UBERON:0001893,9.96e-22,29;UBERON:0001049,5.37e-20,52;UBERON:0005068,5.37e-20,52;UBERON:0006241,5.37e-20,52;UBERON:0007135,5.37e-20,52;UBERON:0001017,1.76e-19,73;UBERON:0000073,3.78e-19,54;UBERON:0001016,7.09e-19,75;UBERON:0002346,9.52e-18,64;UBERON:0003075,9.52e-18,64;UBERON:0007284,9.52e-18,64;UBERON:0004121,6.87e-16,95;UBERON:0000924,6.87e-16,95;UBERON:0006601,6.87e-16,95;UBERON:0002780,1.39e-15,39;UBERON:0001890,1.39e-15,39;UBERON:0006240,1.39e-15,39;UBERON:0010371,3.48e-15,73;UBERON:0003080,3.88e-15,40;UBERON:0000956,3.33e-14,21;UBERON:0001869,3.33e-14,21;UBERON:0000203,3.33e-14,21;UBERON:0003056,6.35e-14,49;UBERON:0001948,2.16e-13,5;UBERON:0002315,2.16e-13,5;UBERON:0002257,3.52e-13,3;UBERON:0002616,7.22e-13,46;UBERON:0000955,1.52e-12,47;UBERON:0006238,1.52e-12,47;UBERON:0010314,2.07e-11,92;UBERON:0002240,3.47e-11,6;UBERON:0005174,3.47e-11,6;UBERON:0001137,3.47e-11,6;UBERON:0002420,7.79e-09,8;UBERON:0007245,7.79e-09,8;UBERON:0010009,7.79e-09,8;UBERON:0010011,7.79e-09,8;UBERON:0000454,7.79e-09,8;UBERON:0000369,2.90e-08,5;UBERON:0002435,2.90e-08,5;UBERON:0000204,2.90e-08,5;UBERON:0010082,2.90e-08,5;UBERON:0002619,7.01e-08,17;UBERON:0000025,1.68e-07,114;UBERON:0004111,8.28e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,1.82084814773638,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0,1.8664130215526,6.21027316325777,2.10324961351382,1.71390590642282,0.883474163806454,1.10241719293459,0.958454710182364,8.27296907949019,0,0.766124028511126,0.307213066512487,2.50583946687368,3.01909223887952,2.6045668527838,4.18774498502071,0.56276261003168,0.61119299110724,2.06240009831567,2.42031857358475,2.98239113320481,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0.251308704225729,0,0.255715457330331,0.20778804455956,0,0,0,0,0,0.130120442962704,1.14951052216736,0.540186389416048,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92614151141356,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0.809621403349789,0.292255857911312,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,1.3748254587495,0.685082519770642,0.755393897389701,0,0.900642406448441,1.81256963593682,0.51776031175182,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0,0,0.206035057238894,0,0.505394423527595,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.38581844092741,0,0,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,1.22769312950907,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr8:125944765..125944779,+ | |||
}} |
Latest revision as of 02:39, 6 August 2015
Short description: | p@chr8:125944765..125944779, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:125944765..125944779, + |
Coexpression cluster: | MCL_coexpression_mm9:392 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.03e-44 | 23 |
neuroblast (sensu Vertebrata) | 7.03e-44 | 23 |
neuron | 8.90e-30 | 33 |
neuronal stem cell | 8.90e-30 | 33 |
neuroblast | 8.90e-30 | 33 |
electrically signaling cell | 8.90e-30 | 33 |
electrically responsive cell | 8.87e-25 | 39 |
electrically active cell | 8.87e-25 | 39 |
neural cell | 3.22e-22 | 43 |
ectodermal cell | 1.19e-21 | 44 |
neurectodermal cell | 1.19e-21 | 44 |
neuron of cerebral cortex | 3.16e-17 | 6 |
striatum neuron | 1.81e-13 | 3 |
neuron of the ventral spinal cord | 3.52e-13 | 3 |
granule cell | 3.87e-13 | 3 |
embryonic cell | 1.44e-12 | 70 |
somatic stem cell | 5.26e-09 | 91 |
multi fate stem cell | 5.26e-09 | 91 |
stem cell | 2.86e-08 | 97 |