FFCP PHASE1:Mm9::chr8:61392493..61392501,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1052|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:61392493..61392501,+|id=chr8:61392493..61392501,+|ontology_enrichment_celltype=CL:0000117!1.06e-18!23;CL:0000337!1.06e-18!23;CL:0000540!2.11e-12!33;CL:0000047!2.11e-12!33;CL:0000031!2.11e-12!33;CL:0000404!2.11e-12!33;CL:0000393!1.51e-09!39;CL:0000211!1.51e-09!39;CL:0000221!1.32e-08!44;CL:0000133!1.32e-08!44;CL:0002319!4.12e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,9.94e-29,23;CL:0000337,9.94e-29,23;CL:0002614,2.44e-21,3;CL:0002612,4.57e-21,3;CL:0000540,9.13e-20,33;CL:0000047,9.13e-20,33;CL:0000031,9.13e-20,33;CL:0000404,9.13e-20,33;CL:0000393,1.38e-16,39;CL:0000211,1.38e-16,39;CL:0002319,5.91e-15,43;CL:0000221,1.36e-14,44;CL:0000133,1.36e-14,44;CL:0000120,5.01e-10,3;CL:0002613,5.01e-10,3;CL:0002321,8.59e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.70e-24!71;UBERON:0003075!1.70e-24!71;UBERON:0007284!1.70e-24!71;UBERON:0002020!1.03e-22!34;UBERON:0000033!2.62e-22!63;UBERON:0004121!7.45e-22!102;UBERON:0000924!7.45e-22!102;UBERON:0006601!7.45e-22!102;UBERON:0003056!1.03e-21!49;UBERON:0001049!3.42e-21!52;UBERON:0005068!3.42e-21!52;UBERON:0006241!3.42e-21!52;UBERON:0007135!3.42e-21!52;UBERON:0001017!1.20e-20!73;UBERON:0005743!1.20e-20!73;UBERON:0000073!9.29e-20!75;UBERON:0001016!9.29e-20!75;UBERON:0000955!3.43e-17!50;UBERON:0006238!3.43e-17!50;UBERON:0002791!8.76e-17!29;UBERON:0003528!8.76e-17!29;UBERON:0001893!8.76e-17!29;UBERON:0002616!3.09e-16!49;UBERON:0003080!1.35e-15!40;UBERON:0002780!1.19e-14!39;UBERON:0001890!1.19e-14!39;UBERON:0006240!1.19e-14!39;UBERON:0007811!3.53e-13!86;UBERON:0002420!2.04e-11!8;UBERON:0007245!2.04e-11!8;UBERON:0010009!2.04e-11!8;UBERON:0010011!2.04e-11!8;UBERON:0000454!2.04e-11!8;UBERON:0000153!4.23e-11!94;UBERON:0002619!2.12e-09!17;UBERON:0002240!9.56e-09!6;UBERON:0005174!9.56e-09!6;UBERON:0001137!9.56e-09!6;UBERON:0002298!2.15e-08!6;UBERON:0000956!2.85e-08!21;UBERON:0001869!2.85e-08!21;UBERON:0000203!2.85e-08!21;UBERON:0002021!3.91e-08!10;UBERON:0000411!3.91e-08!10;UBERON:0001950!3.91e-08!10;UBERON:0001948!9.73e-08!5;UBERON:0002315!9.73e-08!5;UBERON:0000369!2.29e-07!5;UBERON:0002435!2.29e-07!5;UBERON:0000204!2.29e-07!5;UBERON:0010082!2.29e-07!5;UBERON:0000970!2.85e-07!9;UBERON:0000019!2.85e-07!9;UBERON:0000047!2.85e-07!9;UBERON:0004088!2.85e-07!9;UBERON:0002104!2.85e-07!9;UBERON:0001456!2.85e-07!9;UBERON:0003072!2.85e-07!9;UBERON:0003071!2.85e-07!9;UBERON:0004128!2.85e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.88e-21,8;UBERON:0007245,1.88e-21,8;UBERON:0010009,1.88e-21,8;UBERON:0010011,1.88e-21,8;UBERON:0000454,1.88e-21,8;UBERON:0002038,2.44e-21,3;UBERON:0009663,2.44e-21,3;UBERON:0009661,2.44e-21,3;UBERON:0000125,2.44e-21,3;UBERON:0002308,2.44e-21,3;UBERON:0002257,4.57e-21,3;UBERON:0002020,4.44e-19,34;UBERON:0002950,3.57e-16,4;UBERON:0001891,3.57e-16,4;UBERON:0009616,3.57e-16,4;UBERON:0010286,3.57e-16,4;UBERON:0001948,6.67e-13,5;UBERON:0002315,6.67e-13,5;UBERON:0001017,2.55e-12,73;UBERON:0001049,3.81e-12,52;UBERON:0005068,3.81e-12,52;UBERON:0006241,3.81e-12,52;UBERON:0007135,3.81e-12,52;UBERON:0001016,5.83e-12,75;UBERON:0002346,8.45e-12,64;UBERON:0003075,8.45e-12,64;UBERON:0007284,8.45e-12,64;UBERON:0000073,1.17e-11,54;UBERON:0003528,4.89e-11,29;UBERON:0002791,4.89e-11,29;UBERON:0001893,4.89e-11,29;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0002240,7.52e-11,6;UBERON:0005174,7.52e-11,6;UBERON:0001137,7.52e-11,6;UBERON:0010371,3.33e-10,73;UBERON:0003056,3.43e-08,49;UBERON:0002780,4.52e-08,39;UBERON:0001890,4.52e-08,39;UBERON:0006240,4.52e-08,39;UBERON:0003080,7.42e-08,40;UBERON:0010314,7.52e-08,92;UBERON:0002616,9.32e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,3.70293685490423,0.633831403506179,0,0,0,0,0,0,0,0,0.405017814995072,0,0.571301968807607,0.662605622854841,0.367472397644862,0.287536413054709,0,0,0.383062014255563,0.614426133024974,1.31886287730194,1.73826522844578,0.52091337055676,1.3959149950069,2.25105044012672,1.5279824777681,2.06240009831567,1.13897344639282,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0.457500602818626,0.879580464790051,0,0.767146371990992,0.41557608911912,0.811206315338788,0.101839363850316,0,0,0,0.130120442962704,1.37941262660084,0.180062129805349,0.30140963567143,0.204109497453984,0.512454881139399,0.562210347358373,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0.581857461502877,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.4816517699633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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1052 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:61392493..61392501,+ | |||
|description=CAGE_peak_at_chr8:61392493..61392501,+ | |||
|id=chr8:61392493..61392501,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.06e-18!23;CL:0000337!1.06e-18!23;CL:0000540!2.11e-12!33;CL:0000047!2.11e-12!33;CL:0000031!2.11e-12!33;CL:0000404!2.11e-12!33;CL:0000393!1.51e-09!39;CL:0000211!1.51e-09!39;CL:0000221!1.32e-08!44;CL:0000133!1.32e-08!44;CL:0002319!4.12e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.94e-29,23;CL:0000337,9.94e-29,23;CL:0002614,2.44e-21,3;CL:0002612,4.57e-21,3;CL:0000540,9.13e-20,33;CL:0000047,9.13e-20,33;CL:0000031,9.13e-20,33;CL:0000404,9.13e-20,33;CL:0000393,1.38e-16,39;CL:0000211,1.38e-16,39;CL:0002319,5.91e-15,43;CL:0000221,1.36e-14,44;CL:0000133,1.36e-14,44;CL:0000120,5.01e-10,3;CL:0002613,5.01e-10,3;CL:0002321,8.59e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.70e-24!71;UBERON:0003075!1.70e-24!71;UBERON:0007284!1.70e-24!71;UBERON:0002020!1.03e-22!34;UBERON:0000033!2.62e-22!63;UBERON:0004121!7.45e-22!102;UBERON:0000924!7.45e-22!102;UBERON:0006601!7.45e-22!102;UBERON:0003056!1.03e-21!49;UBERON:0001049!3.42e-21!52;UBERON:0005068!3.42e-21!52;UBERON:0006241!3.42e-21!52;UBERON:0007135!3.42e-21!52;UBERON:0001017!1.20e-20!73;UBERON:0005743!1.20e-20!73;UBERON:0000073!9.29e-20!75;UBERON:0001016!9.29e-20!75;UBERON:0000955!3.43e-17!50;UBERON:0006238!3.43e-17!50;UBERON:0002791!8.76e-17!29;UBERON:0003528!8.76e-17!29;UBERON:0001893!8.76e-17!29;UBERON:0002616!3.09e-16!49;UBERON:0003080!1.35e-15!40;UBERON:0002780!1.19e-14!39;UBERON:0001890!1.19e-14!39;UBERON:0006240!1.19e-14!39;UBERON:0007811!3.53e-13!86;UBERON:0002420!2.04e-11!8;UBERON:0007245!2.04e-11!8;UBERON:0010009!2.04e-11!8;UBERON:0010011!2.04e-11!8;UBERON:0000454!2.04e-11!8;UBERON:0000153!4.23e-11!94;UBERON:0002619!2.12e-09!17;UBERON:0002240!9.56e-09!6;UBERON:0005174!9.56e-09!6;UBERON:0001137!9.56e-09!6;UBERON:0002298!2.15e-08!6;UBERON:0000956!2.85e-08!21;UBERON:0001869!2.85e-08!21;UBERON:0000203!2.85e-08!21;UBERON:0002021!3.91e-08!10;UBERON:0000411!3.91e-08!10;UBERON:0001950!3.91e-08!10;UBERON:0001948!9.73e-08!5;UBERON:0002315!9.73e-08!5;UBERON:0000369!2.29e-07!5;UBERON:0002435!2.29e-07!5;UBERON:0000204!2.29e-07!5;UBERON:0010082!2.29e-07!5;UBERON:0000970!2.85e-07!9;UBERON:0000019!2.85e-07!9;UBERON:0000047!2.85e-07!9;UBERON:0004088!2.85e-07!9;UBERON:0002104!2.85e-07!9;UBERON:0001456!2.85e-07!9;UBERON:0003072!2.85e-07!9;UBERON:0003071!2.85e-07!9;UBERON:0004128!2.85e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.88e-21,8;UBERON:0007245,1.88e-21,8;UBERON:0010009,1.88e-21,8;UBERON:0010011,1.88e-21,8;UBERON:0000454,1.88e-21,8;UBERON:0002038,2.44e-21,3;UBERON:0009663,2.44e-21,3;UBERON:0009661,2.44e-21,3;UBERON:0000125,2.44e-21,3;UBERON:0002308,2.44e-21,3;UBERON:0002257,4.57e-21,3;UBERON:0002020,4.44e-19,34;UBERON:0002950,3.57e-16,4;UBERON:0001891,3.57e-16,4;UBERON:0009616,3.57e-16,4;UBERON:0010286,3.57e-16,4;UBERON:0001948,6.67e-13,5;UBERON:0002315,6.67e-13,5;UBERON:0001017,2.55e-12,73;UBERON:0001049,3.81e-12,52;UBERON:0005068,3.81e-12,52;UBERON:0006241,3.81e-12,52;UBERON:0007135,3.81e-12,52;UBERON:0001016,5.83e-12,75;UBERON:0002346,8.45e-12,64;UBERON:0003075,8.45e-12,64;UBERON:0007284,8.45e-12,64;UBERON:0000073,1.17e-11,54;UBERON:0003528,4.89e-11,29;UBERON:0002791,4.89e-11,29;UBERON:0001893,4.89e-11,29;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0002240,7.52e-11,6;UBERON:0005174,7.52e-11,6;UBERON:0001137,7.52e-11,6;UBERON:0010371,3.33e-10,73;UBERON:0003056,3.43e-08,49;UBERON:0002780,4.52e-08,39;UBERON:0001890,4.52e-08,39;UBERON:0006240,4.52e-08,39;UBERON:0003080,7.42e-08,40;UBERON:0010314,7.52e-08,92;UBERON:0002616,9.32e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,3.70293685490423,0.633831403506179,0,0,0,0,0,0,0,0,0.405017814995072,0,0.571301968807607,0.662605622854841,0.367472397644862,0.287536413054709,0,0,0.383062014255563,0.614426133024974,1.31886287730194,1.73826522844578,0.52091337055676,1.3959149950069,2.25105044012672,1.5279824777681,2.06240009831567,1.13897344639282,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0.457500602818626,0.879580464790051,0,0.767146371990992,0.41557608911912,0.811206315338788,0.101839363850316,0,0,0,0.130120442962704,1.37941262660084,0.180062129805349,0.30140963567143,0.204109497453984,0.512454881139399,0.562210347358373,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0.581857461502877,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,1.20297227640581,0.685082519770642,1.5107877947794,0.675022500231806,0.900642406448441,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0.25384382367503,0.365855945745545,0,0.407412341537585,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr8:61392493..61392501,+ | |||
}} |
Latest revision as of 22:34, 3 August 2015
Short description: | p@chr8:61392493..61392501, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:61392493..61392501, + |
Coexpression cluster: | MCL_coexpression_mm9:1052 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.94e-29 | 23 |
neuroblast (sensu Vertebrata) | 9.94e-29 | 23 |
neuron of the substantia nigra | 2.44e-21 | 3 |
neuron of the ventral spinal cord | 4.57e-21 | 3 |
neuron | 9.13e-20 | 33 |
neuronal stem cell | 9.13e-20 | 33 |
neuroblast | 9.13e-20 | 33 |
electrically signaling cell | 9.13e-20 | 33 |
electrically responsive cell | 1.38e-16 | 39 |
electrically active cell | 1.38e-16 | 39 |
neural cell | 5.91e-15 | 43 |
ectodermal cell | 1.36e-14 | 44 |
neurectodermal cell | 1.36e-14 | 44 |
granule cell | 5.01e-10 | 3 |
striatum neuron | 5.01e-10 | 3 |
embryonic cell | 8.59e-09 | 70 |