FFCP PHASE1:Hg19::chr2:20425294..20425305,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=6382 | |EntrezGene=entrezgene:6382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=10658 | |HGNC=HGNC:10658 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=P18827 | |UniProt=uniprot:P18827 | ||
|association_with_transcript=-100bp_to_ENST00000381150,NM_001006946,uc002rdp.1_5end | |association_with_transcript=-100bp_to_ENST00000381150,NM_001006946,uc002rdp.1_5end | ||
|cluster_id=chr2:20425294..20425305,- | |||
|description=CAGE_peak_12_at_SDC1_5end | |description=CAGE_peak_12_at_SDC1_5end | ||
|id=chr2:20425294..20425305,- | |id=chr2:20425294..20425305,- |
Revision as of 05:15, 29 July 2015
Short description: | p12@SDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000381150, NM_001006946, uc002rdp.1_5end |
EntrezGene: | 6382 |
HGNC: | 10658 |
UniProt: | P18827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p12@SDC1 |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 5.47e-23 | 2 |
acinar cell of salivary gland | 1.32e-15 | 3 |
smooth muscle cell of the pulmonary artery | 3.08e-12 | 1 |
acinar cell | 9.70e-10 | 5 |
endo-epithelial cell | 4.47e-09 | 42 |
endodermal cell | 1.03e-08 | 58 |
protein secreting cell | 2.91e-08 | 6 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 7.03e-13 | 1 |
paranasal sinus | 7.03e-13 | 1 |
cornea | 5.40e-12 | 4 |
eye surface | 5.40e-12 | 4 |
optic eminence | 5.40e-12 | 4 |
corneal primordium | 5.40e-12 | 4 |
neural crest-derived structure | 1.78e-10 | 10 |
neural crest | 1.78e-10 | 10 |
neural fold | 1.78e-10 | 10 |
head | 4.94e-09 | 56 |
Showing 1 to 10 of 34 entries
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 7.03e-13 | 1 |
maxillary sinus cancer | 7.03e-13 | 1 |
Showing 1 to 2 of 2 entries