FFCP PHASE1:Hg19::chr11:65778976..65778988,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2478 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 12:49, 19 September 2015
| Short description: | p4@CST6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_CST6_5end |
| Coexpression cluster: | C1349_Alveolar_bile_chorionic_clear_amniotic_papillotubular_serous |
| Association with transcript: | 21bp_to_uc001ogq.1_5end |
| EntrezGene: | CST6 |
| HGNC: | 2478 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@CST6 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| chorionic membrane mesenchymal stem cell | 1.02e-27 | 3 |
| extraembryonic cell | 5.42e-22 | 19 |
| amnion mesenchymal stem cell | 2.87e-16 | 5 |
| brush border epithelial cell | 2.83e-12 | 3 |
| kidney cortex tubule cell | 2.83e-12 | 3 |
| epithelial cell of proximal tubule | 2.83e-12 | 3 |
| kidney cortical cell | 8.39e-12 | 12 |
| renal cortical epithelial cell | 8.39e-12 | 12 |
| epithelial cell of nephron | 1.77e-09 | 15 |
| kidney cell | 2.22e-08 | 17 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic membrane | 4.43e-30 | 14 |
| membranous layer | 4.43e-30 | 14 |
| egg chorion | 1.02e-27 | 3 |
| chorion | 1.26e-20 | 7 |
| extraembryonic structure | 2.89e-17 | 24 |
| renal cortex tubule | 2.83e-12 | 3 |
| region of nephron tubule | 2.83e-12 | 3 |
| proximal tubule | 2.83e-12 | 3 |
| cortex of kidney | 8.39e-12 | 12 |
| renal parenchyma | 8.39e-12 | 12 |
Showing 1 to 10 of 30 entries
| Ontology term | p-value | n |
|---|---|---|
| clear cell adenocarcinoma | 2.90e-18 | 2 |
| squamous cell carcinoma | 3.83e-10 | 14 |
Showing 1 to 2 of 2 entries
