FFCP PHASE1:Hg19::chr14:55034385..55034400,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=23023 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 07:56, 20 September 2015
Short description: | p20@SAMD4A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SAMD4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000555112_5end |
EntrezGene: | SAMD4A |
HGNC: | 23023 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p20@SAMD4A |
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0.0
0.5
1.0
1.5
2.0
2.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.82e-07 | 3 |
branched duct epithelial cell | 1.82e-07 | 3 |
tracheal epithelial cell | 1.82e-07 | 3 |
tracheoblast | 1.82e-07 | 3 |
hepatic stellate cell | 2.05e-07 | 3 |
smooth muscle cell of the coronary artery | 2.19e-07 | 3 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.88e-19 | 1 |
caecum | 1.88e-19 | 1 |
midgut | 1.88e-19 | 1 |
locus ceruleus | 1.57e-10 | 2 |
brainstem nucleus | 1.57e-10 | 2 |
hindbrain nucleus | 1.57e-10 | 2 |
pons | 1.93e-07 | 3 |
coronary artery | 2.19e-07 | 3 |
spinal cord | 2.47e-07 | 3 |
dorsal region element | 2.47e-07 | 3 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.30e-19 | 1 |
mesenchymal cell neoplasm | 1.72e-10 | 2 |
Showing 1 to 2 of 2 entries