FFCP PHASE1:Mm9::chr2:58595934..58595937,-: Difference between revisions
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|id=chr2:58595934..58595937,- | |id=chr2:58595934..58595937,- | ||
|ontology_enrichment_celltype=CL:0000181!2.68e-16!5;CL:0000417!2.68e-16!5;CL:0000668!2.68e-16!5;CL:0000412!2.68e-16!5;CL:0000182!2.68e-16!5;CL:0000414!1.78e-07!11 | |ontology_enrichment_celltype=CL:0000181!2.68e-16!5;CL:0000417!2.68e-16!5;CL:0000668!2.68e-16!5;CL:0000412!2.68e-16!5;CL:0000182!2.68e-16!5;CL:0000414!1.78e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.09e-46,5;CL:0000057,1.33e-15,1;CL:0000632,1.33e-15,1;CL:0000223,3.36e-12,20;CL:0000066,7.16e-10,25;CL:0002320,2.57e-08,46;CL:0000134,2.57e-08,46;CL:0000219,3.91e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.13e-30!22;UBERON:0007499!7.13e-30!22;UBERON:0006925!7.13e-30!22;UBERON:0009497!7.13e-30!22;UBERON:0000015!7.13e-30!22;UBERON:0002423!7.13e-30!22;UBERON:0006235!7.13e-30!22;UBERON:0008835!7.13e-30!22;UBERON:0003894!7.13e-30!22;UBERON:0004161!7.13e-30!22;UBERON:0008836!7.13e-30!22;UBERON:0009854!1.69e-28!23;UBERON:0009856!1.69e-28!23;UBERON:0002365!4.47e-26!25;UBERON:0002330!4.47e-26!25;UBERON:0005256!2.60e-15!47;UBERON:0005172!1.33e-14!49;UBERON:0005173!1.33e-14!49;UBERON:0002417!1.33e-14!49;UBERON:0000916!1.33e-14!49;UBERON:0005057!6.14e-14!51;UBERON:0002368!1.77e-13!60;UBERON:0003914!5.25e-13!47;UBERON:0003929!8.94e-13!55;UBERON:0002530!2.85e-12!65;UBERON:0000949!7.33e-11!72;UBERON:0009569!2.62e-10!66;UBERON:0000490!2.68e-10!66;UBERON:0005911!9.27e-10!69;UBERON:0002405!1.37e-09!70;UBERON:0001041!5.43e-08!92;UBERON:0005177!1.57e-07!85;UBERON:0000077!1.84e-07!97;UBERON:0000466!5.90e-07!79 | |ontology_enrichment_uberon=UBERON:0002107!7.13e-30!22;UBERON:0007499!7.13e-30!22;UBERON:0006925!7.13e-30!22;UBERON:0009497!7.13e-30!22;UBERON:0000015!7.13e-30!22;UBERON:0002423!7.13e-30!22;UBERON:0006235!7.13e-30!22;UBERON:0008835!7.13e-30!22;UBERON:0003894!7.13e-30!22;UBERON:0004161!7.13e-30!22;UBERON:0008836!7.13e-30!22;UBERON:0009854!1.69e-28!23;UBERON:0009856!1.69e-28!23;UBERON:0002365!4.47e-26!25;UBERON:0002330!4.47e-26!25;UBERON:0005256!2.60e-15!47;UBERON:0005172!1.33e-14!49;UBERON:0005173!1.33e-14!49;UBERON:0002417!1.33e-14!49;UBERON:0000916!1.33e-14!49;UBERON:0005057!6.14e-14!51;UBERON:0002368!1.77e-13!60;UBERON:0003914!5.25e-13!47;UBERON:0003929!8.94e-13!55;UBERON:0002530!2.85e-12!65;UBERON:0000949!7.33e-11!72;UBERON:0009569!2.62e-10!66;UBERON:0000490!2.68e-10!66;UBERON:0005911!9.27e-10!69;UBERON:0002405!1.37e-09!70;UBERON:0001041!5.43e-08!92;UBERON:0005177!1.57e-07!85;UBERON:0000077!1.84e-07!97;UBERON:0000466!5.90e-07!79 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.96e-24,22;UBERON:0007499,3.96e-24,22;UBERON:0006925,3.96e-24,22;UBERON:0009497,3.96e-24,22;UBERON:0000015,3.96e-24,22;UBERON:0002423,3.96e-24,22;UBERON:0006235,3.96e-24,22;UBERON:0008835,3.96e-24,22;UBERON:0003894,3.96e-24,22;UBERON:0004161,3.96e-24,22;UBERON:0008836,3.96e-24,22;UBERON:0009854,4.18e-23,23;UBERON:0009856,4.18e-23,23;UBERON:0002365,2.66e-21,25;UBERON:0002330,2.66e-21,25;UBERON:0005256,4.78e-12,45;UBERON:0003914,1.50e-11,47;UBERON:0005172,4.27e-11,49;UBERON:0005173,4.27e-11,49;UBERON:0002417,4.27e-11,49;UBERON:0000916,4.27e-11,49;UBERON:0003929,6.31e-10,55;UBERON:0002368,3.96e-09,60;UBERON:0003104,5.52e-09,61;UBERON:0009142,5.52e-09,61;UBERON:0002530,1.88e-08,65;UBERON:0000490,2.50e-08,66;UBERON:0009569,2.50e-08,66;UBERON:0002384,2.57e-08,46;UBERON:0005911,5.59e-08,69;UBERON:0000949,1.17e-07,72;UBERON:0005177,5.28e-07,79;UBERON:0001041,6.41e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,1.3599426674155,7.01614149129162,2.59910566979068,4.03224198387602,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0,0,0,0.312037673114561,4.04126204715379,0.717589654087649,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,1.3599426674155,7.01614149129162,2.59910566979068,4.03224198387602,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0,0,0,0.312037673114561,4.04126204715379,0.717589654087649,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:58595934..58595937,- | |short_description=p@chr2:58595934..58595937,- | ||
}} | }} |
Revision as of 11:22, 14 November 2012
Short description: | p@chr2:58595934..58595937, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:58595934..58595937, - |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.09e-46 | 5 |
fibroblast | 1.33e-15 | 1 |
hepatic stellate cell | 1.33e-15 | 1 |
endodermal cell | 3.36e-12 | 20 |
epithelial cell | 7.16e-10 | 25 |
connective tissue cell | 2.57e-08 | 46 |
mesenchymal cell | 2.57e-08 | 46 |
motile cell | 3.91e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
liver | 3.96e-24 | 22 |
epithelial sac | 3.96e-24 | 22 |
digestive gland | 3.96e-24 | 22 |
epithelium of foregut-midgut junction | 3.96e-24 | 22 |
anatomical boundary | 3.96e-24 | 22 |
hepatobiliary system | 3.96e-24 | 22 |
foregut-midgut junction | 3.96e-24 | 22 |
hepatic diverticulum | 3.96e-24 | 22 |
liver primordium | 3.96e-24 | 22 |
septum transversum | 3.96e-24 | 22 |
liver bud | 3.96e-24 | 22 |
digestive tract diverticulum | 4.18e-23 | 23 |
sac | 4.18e-23 | 23 |
exocrine gland | 2.66e-21 | 25 |
exocrine system | 2.66e-21 | 25 |
trunk mesenchyme | 4.78e-12 | 45 |
epithelial tube | 1.50e-11 | 47 |
abdomen element | 4.27e-11 | 49 |
abdominal segment element | 4.27e-11 | 49 |
abdominal segment of trunk | 4.27e-11 | 49 |
abdomen | 4.27e-11 | 49 |
gut epithelium | 6.31e-10 | 55 |
endocrine gland | 3.96e-09 | 60 |
mesenchyme | 5.52e-09 | 61 |
entire embryonic mesenchyme | 5.52e-09 | 61 |
gland | 1.88e-08 | 65 |
unilaminar epithelium | 2.50e-08 | 66 |
subdivision of trunk | 2.50e-08 | 66 |
connective tissue | 2.57e-08 | 46 |
endo-epithelium | 5.59e-08 | 69 |
endocrine system | 1.17e-07 | 72 |
trunk region element | 5.28e-07 | 79 |
foregut | 6.41e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.