FFCP PHASE1:Mm9::chr18:65590666..65590691,+: Difference between revisions
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|id=chr18:65590666..65590691,+ | |id=chr18:65590666..65590691,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.20e-09!32;CL:0002032!1.20e-09!32;CL:0000037!1.20e-09!32;CL:0000566!1.20e-09!32;CL:0000837!1.20e-09!32;CL:0000838!3.97e-09!12;CL:0000084!1.95e-08!11;CL:0000827!1.95e-08!11;CL:0000542!9.47e-08!13;CL:0000051!9.47e-08!13;CL:0002031!1.52e-07!25;CL:0000791!2.57e-07!9;CL:0000789!2.57e-07!9;CL:0002420!2.57e-07!9;CL:0002419!2.57e-07!9;CL:0000790!2.57e-07!9 | |ontology_enrichment_celltype=CL:0000988!1.20e-09!32;CL:0002032!1.20e-09!32;CL:0000037!1.20e-09!32;CL:0000566!1.20e-09!32;CL:0000837!1.20e-09!32;CL:0000838!3.97e-09!12;CL:0000084!1.95e-08!11;CL:0000827!1.95e-08!11;CL:0000542!9.47e-08!13;CL:0000051!9.47e-08!13;CL:0002031!1.52e-07!25;CL:0000791!2.57e-07!9;CL:0000789!2.57e-07!9;CL:0002420!2.57e-07!9;CL:0002419!2.57e-07!9;CL:0000790!2.57e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.59e-10,32;CL:0002032,2.59e-10,32;CL:0000037,2.59e-10,32;CL:0000837,2.59e-10,32;CL:0000838,2.04e-09,12;CL:0000084,1.06e-08,11;CL:0000827,1.06e-08,11;CL:0002031,4.36e-08,25;CL:0000542,4.94e-08,13;CL:0000051,4.94e-08,13;CL:0000791,1.55e-07,9;CL:0000789,1.55e-07,9;CL:0002420,1.55e-07,9;CL:0002419,1.55e-07,9;CL:0000790,1.55e-07,9;CL:0000624,7.13e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.07e-12!48;UBERON:0003081!4.98e-11!88;UBERON:0002390!1.37e-10!45;UBERON:0003061!1.37e-10!45;UBERON:0001007!1.59e-08!128;UBERON:0001555!1.59e-08!128;UBERON:0007026!1.59e-08!128;UBERON:0004119!1.71e-08!130;UBERON:0000925!1.71e-08!130;UBERON:0006595!1.71e-08!130;UBERON:0002405!4.23e-08!70;UBERON:0004921!5.49e-08!126;UBERON:0004185!5.49e-08!126;UBERON:0004177!7.60e-08!29;UBERON:0000926!9.18e-08!193;UBERON:0004120!9.18e-08!193;UBERON:0006603!9.18e-08!193;UBERON:0001004!9.38e-07!42;UBERON:0000072!9.76e-07!27 | |ontology_enrichment_uberon=UBERON:0002193!8.07e-12!48;UBERON:0003081!4.98e-11!88;UBERON:0002390!1.37e-10!45;UBERON:0003061!1.37e-10!45;UBERON:0001007!1.59e-08!128;UBERON:0001555!1.59e-08!128;UBERON:0007026!1.59e-08!128;UBERON:0004119!1.71e-08!130;UBERON:0000925!1.71e-08!130;UBERON:0006595!1.71e-08!130;UBERON:0002405!4.23e-08!70;UBERON:0004921!5.49e-08!126;UBERON:0004185!5.49e-08!126;UBERON:0004177!7.60e-08!29;UBERON:0000926!9.18e-08!193;UBERON:0004120!9.18e-08!193;UBERON:0006603!9.18e-08!193;UBERON:0001004!9.38e-07!42;UBERON:0000072!9.76e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.79e-12,48;UBERON:0002405,1.79e-12,48;UBERON:0002390,3.46e-11,45;UBERON:0003061,3.46e-11,45;UBERON:0003081,1.32e-10,87;UBERON:0001007,2.40e-09,116;UBERON:0001555,2.40e-09,116;UBERON:0007026,2.40e-09,116;UBERON:0004119,3.28e-09,118;UBERON:0000925,3.28e-09,118;UBERON:0006595,3.28e-09,118;UBERON:0000077,5.92e-09,35;UBERON:0004921,9.13e-09,114;UBERON:0004177,1.90e-08,29;UBERON:0005057,1.90e-08,29;UBERON:0000926,2.64e-07,120;UBERON:0004120,2.64e-07,120;UBERON:0006603,2.64e-07,120;UBERON:0000072,2.81e-07,27 | |||
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| ||
|short_description=p1@Malt1 | |short_description=p1@Malt1 | ||
}} | }} |
Revision as of 05:37, 15 November 2012
Short description: | p1@Malt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Malt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:266 |
Association with transcript: | 15bp_to_ENSMUST00000102868, NM_172833, uc008fex.1, uc008fey.1, uc008fez.1, uc008ffa.1, uc012bed.1_5end |
EntrezGene: | Malt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.59e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.59e-10 | 32 |
hematopoietic stem cell | 2.59e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.59e-10 | 32 |
lymphoid lineage restricted progenitor cell | 2.04e-09 | 12 |
T cell | 1.06e-08 | 11 |
pro-T cell | 1.06e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 4.36e-08 | 25 |
lymphocyte | 4.94e-08 | 13 |
common lymphoid progenitor | 4.94e-08 | 13 |
mature alpha-beta T cell | 1.55e-07 | 9 |
alpha-beta T cell | 1.55e-07 | 9 |
immature T cell | 1.55e-07 | 9 |
mature T cell | 1.55e-07 | 9 |
immature alpha-beta T cell | 1.55e-07 | 9 |
CD4-positive, alpha-beta T cell | 7.13e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.79e-12 | 48 |
immune system | 1.79e-12 | 48 |
hematopoietic system | 3.46e-11 | 45 |
blood island | 3.46e-11 | 45 |
lateral plate mesoderm | 1.32e-10 | 87 |
digestive system | 2.40e-09 | 116 |
digestive tract | 2.40e-09 | 116 |
primitive gut | 2.40e-09 | 116 |
endoderm-derived structure | 3.28e-09 | 118 |
endoderm | 3.28e-09 | 118 |
presumptive endoderm | 3.28e-09 | 118 |
mixed endoderm/mesoderm-derived structure | 5.92e-09 | 35 |
subdivision of digestive tract | 9.13e-09 | 114 |
hemopoietic organ | 1.90e-08 | 29 |
immune organ | 1.90e-08 | 29 |
mesoderm | 2.64e-07 | 120 |
mesoderm-derived structure | 2.64e-07 | 120 |
presumptive mesoderm | 2.64e-07 | 120 |
segment of respiratory tract | 2.81e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.