FFCP PHASE1:Hg19::chr12:51664289..51664301,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000039!3.29e-11!7;CL:0000586!3.29e-11!7;CL:0000071!3.89e-07!18;CL:0002546!3.89e-07!18;CL:0002139!7.26e-07!24;CL:0000066!9.92e-07!254 | |ontology_enrichment_celltype=CL:0000039!3.29e-11!7;CL:0000586!3.29e-11!7;CL:0000071!3.89e-07!18;CL:0002546!3.89e-07!18;CL:0002139!7.26e-07!24;CL:0000066!9.92e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.95e-46;7!CL:0000586;9.95e-46;7!CL:0000346;6.56e-08;3!CL:1000428;6.56e-08;3!CL:0002592;6.56e-08;3 | |ontology_enrichment_celltype_v019=CL:0000039;9.95e-46;7!CL:0000586;9.95e-46;7!CL:0000346;6.56e-08;3!CL:1000428;6.56e-08;3!CL:0002592;6.56e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.92e-46,7;CL:0000586,7.92e-46,7;CL:0002592,5.93e-08,3;CL:0000346,6.34e-08,3;CL:1000428,6.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.39e-32;10!UBERON:0005564;3.39e-32;10 | |ontology_enrichment_development_v019=UBERON:0009117;3.39e-32;10!UBERON:0005564;3.39e-32;10 | ||
|ontology_enrichment_disease=DOID:3095!7.54e-08!22;DOID:2994!7.54e-08!22 | |ontology_enrichment_disease=DOID:3095!7.54e-08!22;DOID:2994!7.54e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:1799;4.66e-21;1!DOID:10165;4.66e-21;1!DOID:1798;4.66e-21;1!DOID:3095;6.66e-15;22!DOID:2994;6.66e-15;22 | |ontology_enrichment_disease_v019=DOID:1799;4.66e-21;1!DOID:10165;4.66e-21;1!DOID:1798;4.66e-21;1!DOID:3095;6.66e-15;22!DOID:2994;6.66e-15;22 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,7.72e-21,1;DOID:10165,7.72e-21,1;DOID:1798,7.72e-21,1;DOID:3095,6.20e-15,22;DOID:2994,6.20e-15,22 | |||
|ontology_enrichment_uberon=UBERON:0001981!1.80e-09!60;UBERON:0007500!1.80e-09!60;UBERON:0004537!1.80e-09!60;UBERON:0006965!1.80e-09!60;UBERON:0000055!7.19e-09!69;UBERON:0004872!2.56e-08!84;UBERON:0003914!1.62e-07!118;UBERON:0002049!1.88e-07!79;UBERON:0007798!1.88e-07!79;UBERON:0001986!3.89e-07!18;UBERON:0004638!3.89e-07!18;UBERON:0004852!3.89e-07!18;UBERON:0001637!8.38e-07!42;UBERON:0003509!8.38e-07!42;UBERON:0004572!8.38e-07!42 | |ontology_enrichment_uberon=UBERON:0001981!1.80e-09!60;UBERON:0007500!1.80e-09!60;UBERON:0004537!1.80e-09!60;UBERON:0006965!1.80e-09!60;UBERON:0000055!7.19e-09!69;UBERON:0004872!2.56e-08!84;UBERON:0003914!1.62e-07!118;UBERON:0002049!1.88e-07!79;UBERON:0007798!1.88e-07!79;UBERON:0001986!3.89e-07!18;UBERON:0004638!3.89e-07!18;UBERON:0004852!3.89e-07!18;UBERON:0001637!8.38e-07!42;UBERON:0003509!8.38e-07!42;UBERON:0004572!8.38e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.29e-40;8!UBERON:0003135;2.54e-29;11!UBERON:0000991;1.36e-15;21!UBERON:0003101;6.66e-15;22!UBERON:0000079;6.66e-15;22!UBERON:0002323;3.05e-13;45!UBERON:0001264;7.07e-09;10!UBERON:0004458;7.26e-09;48!UBERON:0000922;4.57e-08;49!UBERON:0003498;6.56e-08;3!UBERON:0005985;6.56e-08;3!UBERON:0000412;6.56e-08;3!UBERON:0001621;6.56e-08;3!UBERON:0001992;6.56e-08;3!UBERON:0002553;7.99e-08;52 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.29e-40;8!UBERON:0003135;2.54e-29;11!UBERON:0000991;1.36e-15;21!UBERON:0003101;6.66e-15;22!UBERON:0000079;6.66e-15;22!UBERON:0002323;3.05e-13;45!UBERON:0001264;7.07e-09;10!UBERON:0004458;7.26e-09;48!UBERON:0000922;4.57e-08;49!UBERON:0003498;6.56e-08;3!UBERON:0005985;6.56e-08;3!UBERON:0000412;6.56e-08;3!UBERON:0001621;6.56e-08;3!UBERON:0001992;6.56e-08;3!UBERON:0002553;7.99e-08;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.52e-40,8;UBERON:0003135,2.20e-29,11;UBERON:0000991,1.26e-15,21;UBERON:0009196,1.26e-15,21;UBERON:0009117,1.26e-15,21;UBERON:0005564,1.26e-15,21;UBERON:0002323,1.84e-15,46;UBERON:0004176,6.20e-15,22;UBERON:0003101,6.20e-15,22;UBERON:0000079,6.20e-15,22;UBERON:0004458,1.63e-14,49;UBERON:0003886,3.64e-13,54;UBERON:0002553,1.20e-11,61;UBERON:0001264,8.96e-09,10;UBERON:0001621,5.93e-08,3;UBERON:0000412,6.34e-08,3;UBERON:0001992,6.34e-08,3;UBERON:0003133,5.05e-07,48 | |||
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| ||
|short_description=p13@SMAGP | |short_description=p13@SMAGP | ||
}} | }} |
Revision as of 16:39, 17 November 2012
Short description: | p13@SMAGP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SMAGP_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -87bp_to_ENST00000380103, NM_001031628, uc001rye.1, uc001ryf.1_5end |
EntrezGene: | SMAGP |
HGNC: | 26918 |
UniProt: | Q0VAQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.92e-46 | 7 |
germ cell | 7.92e-46 | 7 |
smooth muscle cell of the coronary artery | 5.93e-08 | 3 |
hair follicle dermal papilla cell | 6.34e-08 | 3 |
stem cell of epidermis | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 3.52e-40 | 8 |
male reproductive organ | 2.20e-29 | 11 |
gonad | 1.26e-15 | 21 |
indifferent external genitalia | 1.26e-15 | 21 |
indifferent gonad | 1.26e-15 | 21 |
gonad primordium | 1.26e-15 | 21 |
body cavity | 1.84e-15 | 46 |
external genitalia | 6.20e-15 | 22 |
male organism | 6.20e-15 | 22 |
male reproductive system | 6.20e-15 | 22 |
body cavity or lining | 1.63e-14 | 49 |
body cavity precursor | 3.64e-13 | 54 |
anatomical cavity | 1.20e-11 | 61 |
pancreas | 8.96e-09 | 10 |
coronary artery | 5.93e-08 | 3 |
dermal papilla | 6.34e-08 | 3 |
papillary layer of dermis | 6.34e-08 | 3 |
reproductive organ | 5.05e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 7.72e-21 | 1 |
endocrine pancreas cancer | 7.72e-21 | 1 |
pancreatic endocrine carcinoma | 7.72e-21 | 1 |
germ cell and embryonal cancer | 6.20e-15 | 22 |
germ cell cancer | 6.20e-15 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.